RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 HIST1H2BJP06899 126 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 GIG44P09565 113 aaPredicted RBP2.71□□□□□ -1.98
RTN4-208ENST00000404909 RNASE3P12724 160 aaKnown RBP2.71□□□□□ -1.98
RTN4-208ENST00000404909 HIST1H2BOP23527 126 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 HIST1H2BBP33778 126 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 HIST1H2BDP58876 126 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 KRTAP10-11P60412 298 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 HIST1H2BCP62807 126 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 HIST2H2BEQ16778 126 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 TDRG1Q3Y452 100 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.71□□□□□ -1.98
RTN4-208ENST00000404909 DMRTA1Q5VZB9 504 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 RASL11AQ6T310 242 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 HIST1H2BHQ93079 126 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 HIST1H2BNQ99877 126 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 HIST1H2BMQ99879 126 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 CSTL1Q9H114 145 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 IGHV3-16A0A0C4DH30 117 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 AMBPP02760 352 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 S100A8P05109 93 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 OR5AL1P0C617 328 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 EVI2AP22794 236 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 COX19Q49B96 90 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 AMN1Q8IY45 258 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 C1orf158Q8N1D5 194 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 CLUHP3Q96NS8 147 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 MUC4Q99102 2169 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 DNHD1Q96M86 4753 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 TRGV11A0A075B6L2 103 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 WIPF1O43516 503 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 SNAI2O43623 268 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 AZU1P20160 251 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 SRIP30626 198 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 NDUFA6P56556 154 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 SMIM15Q7Z3B0 74 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 LINC00518Q8N0U6 118 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 C1QTNF4Q9BXJ3 329 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 GSN-AS1Q9NRJ2 163 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 GOLT1BQ9Y3E0 138 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 LOC102724200A0A096LPH7 203 aaPredicted RBP2.7□□□□□ -1.98
RTN4-208ENST00000404909 A0A1B0GW15 77 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 PHOX2AO14813 284 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 PRB2P02812 416 aaPredicted RBP2.7□□□□□ -1.98
RTN4-208ENST00000404909 IGHV4-30-4P0DP06 118 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 CACNG7P62955 275 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 MORN3Q6PF18 240 aaPredicted RBP2.7□□□□□ -1.98
RTN4-208ENST00000404909 C14orf178Q8N769 122 aaPredicted RBP2.7□□□□□ -1.98
RTN4-208ENST00000404909 CNFNQ9BYD5 112 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 JPT2Q9H910 190 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 A0A087WWL8 130 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 EMP1P54849 157 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 SNRPEP62304 92 aaKnown RBP2.7□□□□□ -1.98
RTN4-208ENST00000404909 DEFB135Q30KP9 77 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 ZNF876PQ49A33 203 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 PDZD11Q5EBL8 140 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 FAM74A4Q5TZK3 123 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 TMEM256Q8N2U0 113 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 RCHY1Q96PM5 261 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 SCRT2Q9NQ03 307 aa2.7□□□□□ -1.98
RTN4-208ENST00000404909 NACAE9PAV3 2078 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 TRAV26-2A0A0B4J265 109 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 SMKR1H3BMG3 65 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 SMIM17P0DL12 118 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 ZNF415Q09FC8 603 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 FAM104BQ5XKR9 115 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 C20orf144Q9BQM9 153 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 TMEM191AQ9H0A3 160 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 D6R8Y8 96 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 NCR2O95944 276 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 MGPP08493 103 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 MED14OSP0DP75 135 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 CKS2P33552 79 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 APOC4P55056 127 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 RRN3P1Q2M238 152 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 DEFB121Q5J5C9 76 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 ZNF493Q6ZR52 646 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 BAGE3Q86Y29 109 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 SYT8Q8NBV8 401 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 CSNK1G2-AS1Q8NCQ2 148 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 C9orf85Q96MD7 179 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 AP1S3Q96PC3 154 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 IGHV3-73A0A0B4J1V6 119 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 F5H697 171 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 EGFEM1PQ0D2K5 195 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 IQCJQ1A5X6 159 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 MRPL51Q4U2R6 128 aaKnown RBP2.69□□□□□ -1.98
RTN4-208ENST00000404909 DNLZQ5SXM8 178 aa2.69□□□□□ -1.98
RTN4-208ENST00000404909 MRPL16Q9NX20 251 aaKnown RBP2.69□□□□□ -1.98
RTN4-208ENST00000404909 IGHV4-4A0A075B6R2 117 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 TRGV1A0A0A0MS02 117 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 M0R2P5 195 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 GAS8-AS1O95177 125 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 RAB4AP20338 218 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 C11orf72Q8NBR9 251 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 TMEM263Q8WUH6 116 aaKnown RBP2.68□□□□□ -1.98
RTN4-208ENST00000404909 ALKBH7Q9BT30 221 aaPredicted RBP2.68□□□□□ -1.98
RTN4-208ENST00000404909 SAMD10Q9BYL1 202 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 NOP10Q9NPE3 64 aaKnown RBP2.68□□□□□ -1.98
RTN4-208ENST00000404909 DNAH3Q8TD57 4116 aa2.68□□□□□ -1.98
RTN4-208ENST00000404909 LOC389332A0A1B0GUA5 103 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms