RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 LINC00173Q6ZV60 143 aa9.09□□□□□ -0.95
CLIP4-203ENST00000401617 TRAV25A0A0B4J276 109 aa9.09□□□□□ -0.95
CLIP4-203ENST00000401617 LOC389332A0A1B0GUA5 103 aa9.09□□□□□ -0.95
CLIP4-203ENST00000401617 TNFRSF6BO95407 300 aa9.09□□□□□ -0.95
CLIP4-203ENST00000401617 HLA-DRB4P13762 266 aa9.09□□□□□ -0.95
CLIP4-203ENST00000401617 C11orf44Q8N8P7 122 aa9.09□□□□□ -0.95
CLIP4-203ENST00000401617 C20orf144Q9BQM9 153 aa9.09□□□□□ -0.95
CLIP4-203ENST00000401617 TMEM70Q9BUB7 260 aa9.09□□□□□ -0.95
CLIP4-203ENST00000401617 PHLDA3Q9Y5J5 127 aa9.09□□□□□ -0.95
CLIP4-203ENST00000401617 HLA-DRB4X5D2U9 266 aa9.09□□□□□ -0.95
CLIP4-203ENST00000401617 DEFB131AP59861 70 aa9.08□□□□□ -0.96
CLIP4-203ENST00000401617 NRACQ8N912 160 aa9.08□□□□□ -0.96
CLIP4-203ENST00000401617 DYNLRB2Q8TF09 96 aa9.08□□□□□ -0.96
CLIP4-203ENST00000401617 JMJD8Q96S16 334 aa9.08□□□□□ -0.96
CLIP4-203ENST00000401617 MAP1LC3AQ9H492 121 aa9.08□□□□□ -0.96
CLIP4-203ENST00000401617 HSPB8Q9UJY1 196 aa9.08□□□□□ -0.96
CLIP4-203ENST00000401617 ZNF256Q9Y2P7 627 aaPredicted RBP9.08□□□□□ -0.96
CLIP4-203ENST00000401617 A0A1W2PRX2 142 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 H3BMM0 161 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 SYS1-DBNDD2H3BUS1 97 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 IGKV3-20P01619 116 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 GATA1P15976 413 aaPredicted RBP9.07□□□□□ -0.96
CLIP4-203ENST00000401617 PROK1P58294 105 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 CD300EQ496F6 205 aaPredicted RBP9.07□□□□□ -0.96
CLIP4-203ENST00000401617 SPATA12Q7Z6I5 190 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 POM121L12Q8N7R1 296 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 MRAP2Q96G30 205 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 SPAG8Q99932 426 aaPredicted RBP9.07□□□□□ -0.96
CLIP4-203ENST00000401617 VAMP8Q9BV40 100 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 SETD2Q9BYW2 2564 aaPredicted RBP9.07□□□□□ -0.96
CLIP4-203ENST00000401617 IGLV2-18A0A075B6J9 118 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 M0R381 172 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 SPINK13Q1W4C9 94 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 OTOGQ6ZRI0 2925 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 OR2K2Q8NGT1 345 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 C9orf85Q96MD7 179 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 ZNF747Q9BV97 191 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 MAP6D1Q9H9H5 199 aa9.07□□□□□ -0.96
CLIP4-203ENST00000401617 NXT2Q9NPJ8 142 aaKnown RBP9.07□□□□□ -0.96
CLIP4-203ENST00000401617 TIMM8BQ9Y5J9 83 aaPredicted RBP9.07□□□□□ -0.96
CLIP4-203ENST00000401617 TRAV12-2A0A075B6T6 113 aa9.06□□□□□ -0.96
CLIP4-203ENST00000401617 IGHV3-16A0A0C4DH30 117 aa9.06□□□□□ -0.96
CLIP4-203ENST00000401617 KNCNA6PVL3 124 aa9.06□□□□□ -0.96
CLIP4-203ENST00000401617 ADARB2-AS1A8MUL3 147 aa9.06□□□□□ -0.96
CLIP4-203ENST00000401617 SPRY2O43597 315 aa9.06□□□□□ -0.96
CLIP4-203ENST00000401617 CTAG1AP78358 180 aa9.06□□□□□ -0.96
CLIP4-203ENST00000401617 DPH3P1Q9H4G8 78 aa9.06□□□□□ -0.96
CLIP4-203ENST00000401617 OR4C46A6NHA9 309 aa9.06□□□□□ -0.96
CLIP4-203ENST00000401617 PET117Q6UWS5 81 aa9.06□□□□□ -0.96
CLIP4-203ENST00000401617 CLUHP3Q96NS8 147 aa9.06□□□□□ -0.96
CLIP4-203ENST00000401617 KIF25-AS1Q9Y6Z4 181 aa9.06□□□□□ -0.96
CLIP4-203ENST00000401617 IGHV1OR15-1A0A075B7D0 117 aa9.05□□□□□ -0.96
CLIP4-203ENST00000401617 RBMY1BA6NDE4 496 aaKnown RBP9.05□□□□□ -0.96
CLIP4-203ENST00000401617 RBMY1EA6NEQ0 496 aaKnown RBP9.05□□□□□ -0.96
CLIP4-203ENST00000401617 CD7P09564 240 aa9.05□□□□□ -0.96
CLIP4-203ENST00000401617 RBMY1DP0C7P1 496 aaKnown RBP9.05□□□□□ -0.96
CLIP4-203ENST00000401617 Q8N8P6 123 aa9.05□□□□□ -0.96
CLIP4-203ENST00000401617 NDUFAF3Q9BU61 184 aa9.05□□□□□ -0.96
CLIP4-203ENST00000401617 MAP1LC3CQ9BXW4 147 aa9.05□□□□□ -0.96
CLIP4-203ENST00000401617 HBDP02042 147 aa9.05□□□□□ -0.96
CLIP4-203ENST00000401617 LINC00315P59091 139 aa9.05□□□□□ -0.96
CLIP4-203ENST00000401617 AP1S3Q96PC3 154 aa9.05□□□□□ -0.96
CLIP4-203ENST00000401617 PAM16Q9Y3D7 125 aa9.05□□□□□ -0.96
CLIP4-203ENST00000401617 SETXQ7Z333 2677 aaKnown RBP9.04□□□□□ -0.96
CLIP4-203ENST00000401617 TRAV26-2A0A0B4J265 109 aa9.04□□□□□ -0.96
CLIP4-203ENST00000401617 Q8N1Y9 231 aa9.04□□□□□ -0.96
CLIP4-203ENST00000401617 C14orf178Q8N769 122 aaPredicted RBP9.04□□□□□ -0.96
CLIP4-203ENST00000401617 C14orf144Q96I85 54 aa9.04□□□□□ -0.96
CLIP4-203ENST00000401617 RBMY1A1P0DJD3 496 aaKnown RBP9.03□□□□□ -0.96
CLIP4-203ENST00000401617 RBMY1CP0DJD4 496 aa9.03□□□□□ -0.96
CLIP4-203ENST00000401617 DEFA6Q01524 100 aa9.03□□□□□ -0.96
CLIP4-203ENST00000401617 RBMY1FQ15415 496 aaKnown RBP9.03□□□□□ -0.96
CLIP4-203ENST00000401617 ZNF124Q15973 351 aa9.03□□□□□ -0.96
CLIP4-203ENST00000401617 LINC01545Q5VT33 79 aa9.03□□□□□ -0.96
CLIP4-203ENST00000401617 FOSL1P15407 271 aa9.03□□□□□ -0.96
CLIP4-203ENST00000401617 RASL10AQ92737 203 aa9.03□□□□□ -0.96
CLIP4-203ENST00000401617 MDFICQ9P1T7 246 aa9.03□□□□□ -0.96
CLIP4-203ENST00000401617 TRAV9-2A0A087WT02 112 aa9.02□□□□□ -0.97
CLIP4-203ENST00000401617 C20orf202A1L168 122 aa9.02□□□□□ -0.97
CLIP4-203ENST00000401617 FCER1GP30273 86 aa9.02□□□□□ -0.97
CLIP4-203ENST00000401617 ODF3L2Q3SX64 289 aa9.02□□□□□ -0.97
CLIP4-203ENST00000401617 SPATA45Q537H7 98 aa9.02□□□□□ -0.97
CLIP4-203ENST00000401617 MIEN1Q9BRT3 115 aa9.02□□□□□ -0.97
CLIP4-203ENST00000401617 NSD1Q96L73 2696 aaPredicted RBP9.02□□□□□ -0.97
CLIP4-203ENST00000401617 ATOH7Q8N100 152 aa9.02□□□□□ -0.97
CLIP4-203ENST00000401617 C20orf78Q9BR46 151 aa9.02□□□□□ -0.97
CLIP4-203ENST00000401617 TRGV11A0A075B6L2 103 aa9.01□□□□□ -0.97
CLIP4-203ENST00000401617 INAFM1C9JVW0 142 aa9.01□□□□□ -0.97
CLIP4-203ENST00000401617 FXYD7P58549 80 aa9.01□□□□□ -0.97
CLIP4-203ENST00000401617 KRTAP10-3P60369 221 aa9.01□□□□□ -0.97
CLIP4-203ENST00000401617 LINC00467Q9BRT7 94 aa9.01□□□□□ -0.97
CLIP4-203ENST00000401617 FN1P02751 2386 aaKnown RBP9.01□□□□□ -0.97
CLIP4-203ENST00000401617 PPP1R17O96001 155 aa9□□□□□ -0.97
CLIP4-203ENST00000401617 MAJINQ3KP22 176 aa9□□□□□ -0.97
CLIP4-203ENST00000401617 SMIM2Q9BVW6 85 aa9□□□□□ -0.97
CLIP4-203ENST00000401617 JPT2Q9H910 190 aa9□□□□□ -0.97
CLIP4-203ENST00000401617 C2CD3Q4AC94 2353 aa8.99□□□□□ -0.97
CLIP4-203ENST00000401617 HIVEP1P15822 2718 aa8.99□□□□□ -0.97
CLIP4-203ENST00000401617 IGLC3P0DOY3 106 aa8.99□□□□□ -0.97
CLIP4-203ENST00000401617 SUMO2P61956 95 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms