RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 PMCHL1Q16048 86 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 AMMECR1LQ6DCA0 310 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 PATE2Q6UY27 113 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 BAGE3Q86Y29 109 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 BAGE2Q86Y30 109 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 LINC01587Q99440 93 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 C2CD3Q4AC94 2353 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 ACANP16112 2415 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 P0DMU3 169 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 FAM231AP0DMU4 169 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 FAM231CP0DMU5 169 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 TMEM183AQ8IXX5 376 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 TMEM75Q8N9X5 138 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 LINC00312Q9Y6C7 94 aa4.68□□□□□ -1.66
TRAPPC13-202ENST00000399438 IGHV3-49A0A0A0MS15 119 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 A0A0J9YXV3 536 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 FOXA3P55318 350 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 KRTDAPP60985 99 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 C11orf71Q6IPW1 123 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 LINC00305Q7Z4B0 112 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 TP53TG3Q9ULZ0 132 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 USP24Q9UPU5 2620 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 TMSB15BA0A087X1C1 80 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 TRAV8-3A0A0A6YYJ7 113 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 IGHV3-66A0A0C4DH42 116 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 IGHV1-8P0DP01 117 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 SLC25A2Q9BXI2 301 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 FBN2P35556 2912 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 IGHV4-61A0A0C4DH41 118 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 PGPA6NDG6 321 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 IGHV4-59P01825 116 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 LINC00310P59036 64 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 ERHP84090 104 aaKnown RBP4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 ERCC8Q13216 396 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 LCN12Q6JVE5 192 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 LINC00527Q9UJ94 153 aa4.67□□□□□ -1.66
TRAPPC13-202ENST00000399438 NF1P21359 2839 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 TRBV19A0A075B6N1 114 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 IGHV2-26A0A0B4J1V2 119 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 A0A1W2PPR1 153 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 DPM2O94777 84 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 IGLV2-23P01705 113 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 SLC25A5P05141 298 aaKnown RBP4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 ZNF138P52744 262 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 C10orf113Q5VZT2 155 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 LINC00322Q6ZN03 302 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 GTF2H5Q6ZYL4 71 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 PAXXQ9BUH6 204 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 NDUFA4L2Q9NRX3 87 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 TNFRSF19Q9NS68 423 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 SOX21Q9Y651 276 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 IGKV1D-37A0A075B6S9 117 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 TSHBP01222 138 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 ZNF833PQ6ZTB9 187 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 CMTM2Q8TAZ6 248 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 FAM167A-AS1Q96KT0 104 aa4.66□□□□□ -1.66
TRAPPC13-202ENST00000399438 PIGBOS1A0A0B4J2F0 54 aa4.65□□□□□ -1.66
TRAPPC13-202ENST00000399438 M0R3E3 92 aa4.65□□□□□ -1.66
TRAPPC13-202ENST00000399438 CRISP2P16562 243 aa4.65□□□□□ -1.66
TRAPPC13-202ENST00000399438 FOXI2Q6ZQN5 318 aa4.65□□□□□ -1.66
TRAPPC13-202ENST00000399438 PRNTQ86SH4 94 aa4.65□□□□□ -1.66
TRAPPC13-202ENST00000399438 TM2D3Q9BRN9 247 aa4.65□□□□□ -1.66
TRAPPC13-202ENST00000399438 V9GYV3 84 aa4.65□□□□□ -1.66
TRAPPC13-202ENST00000399438 NIPBLQ6KC79 2804 aaeCLIP4.65□□□□□ -1.66
TRAPPC13-202ENST00000399438 JMJD1CQ15652 2540 aa4.65□□□□□ -1.66
TRAPPC13-202ENST00000399438 IGHV3OR16-12A0A075B7B8 117 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 SMIM26A0A096LP01 95 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 J3QR89 54 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 CA7P43166 264 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 RPL27AP46776 148 aaKnown RBP4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 FXYD7P58549 80 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 C6orf99Q4VX62 202 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 TMEM155Q4W5P6 130 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 MEIG1Q5JSS6 88 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 ZNF705AQ6ZN79 300 aaPredicted RBP4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 TRPT1Q86TN4 253 aaKnown RBP4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 PRR15Q8IV56 129 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 PMCHL2Q9BQD1 86 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 PYGO2Q9BRQ0 406 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 TMEM242Q9NWH2 141 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 FKBP11Q9NYL4 201 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 IGLC7A0M8Q6 106 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 MRGPRG-AS1Q2M3A8 158 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 GDF5OSQ5U4N7 250 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 DYNAPQ8N1N2 210 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 NUP37Q8NFH4 326 aa4.65□□□□□ -1.67
TRAPPC13-202ENST00000399438 IGHV1-3A0A0C4DH29 117 aa4.64□□□□□ -1.67
TRAPPC13-202ENST00000399438 PSPHP1O15172 72 aa4.64□□□□□ -1.67
TRAPPC13-202ENST00000399438 IGLV2-8P01709 118 aa4.64□□□□□ -1.67
TRAPPC13-202ENST00000399438 IGHV4-39P01824 125 aa4.64□□□□□ -1.67
TRAPPC13-202ENST00000399438 VMA21Q3ZAQ7 101 aa4.64□□□□□ -1.67
TRAPPC13-202ENST00000399438 OTORQ9NRC9 128 aa4.64□□□□□ -1.67
TRAPPC13-202ENST00000399438 BET1LQ9NYM9 111 aa4.64□□□□□ -1.67
TRAPPC13-202ENST00000399438 IL36BQ9NZH7 164 aa4.64□□□□□ -1.67
TRAPPC13-202ENST00000399438 ZNF253O75346 499 aa4.64□□□□□ -1.67
TRAPPC13-202ENST00000399438 SRP14P37108 136 aaKnown RBP4.64□□□□□ -1.67
TRAPPC13-202ENST00000399438 LYRM7Q5U5X0 104 aa4.64□□□□□ -1.67
TRAPPC13-202ENST00000399438 KMT2BQ9UMN6 2715 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC13-202ENST00000399438 PRB1P04280 392 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms