RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 HTN3P15516 51 aa12.43□□□□□ -0.42
CTNS-203ENST00000399306 ZNF876PQ49A33 203 aa12.43□□□□□ -0.42
CTNS-203ENST00000399306 OCC1Q8TAD7 63 aa12.43□□□□□ -0.42
CTNS-203ENST00000399306 KMT2CQ8NEZ4 4911 aaKnown RBP12.43□□□□□ -0.42
CTNS-203ENST00000399306 ALMS1Q8TCU4 4167 aa12.43□□□□□ -0.42
CTNS-203ENST00000399306 ZNF727A8MUV8 499 aa12.42□□□□□ -0.42
CTNS-203ENST00000399306 SSBP4Q9BWG4 385 aaPredicted RBP12.42□□□□□ -0.42
CTNS-203ENST00000399306 DNAH1Q9P2D7 4330 aa12.42□□□□□ -0.42
CTNS-203ENST00000399306 PGPEP1LA6NFU8 196 aa12.41□□□□□ -0.42
CTNS-203ENST00000399306 SNAI2O43623 268 aa12.41□□□□□ -0.42
CTNS-203ENST00000399306 P01737 135 aa12.41□□□□□ -0.42
CTNS-203ENST00000399306 OR5AL1P0C617 328 aa12.41□□□□□ -0.42
CTNS-203ENST00000399306 ARMS2P0C7Q2 107 aa12.41□□□□□ -0.42
CTNS-203ENST00000399306 TMEM88Q6PEY1 159 aa12.41□□□□□ -0.42
CTNS-203ENST00000399306 FAM231DQ6ZW35 169 aa12.41□□□□□ -0.42
CTNS-203ENST00000399306 SYT8Q8NBV8 401 aa12.41□□□□□ -0.42
CTNS-203ENST00000399306 A8MWV9 139 aa12.4□□□□□ -0.42
CTNS-203ENST00000399306 H3BVH4 76 aa12.4□□□□□ -0.42
CTNS-203ENST00000399306 K7EN84 100 aa12.4□□□□□ -0.42
CTNS-203ENST00000399306 RS1O15537 224 aa12.4□□□□□ -0.42
CTNS-203ENST00000399306 HOXA5P20719 270 aa12.4□□□□□ -0.42
CTNS-203ENST00000399306 OR4C5Q8NGB2 326 aa12.4□□□□□ -0.42
CTNS-203ENST00000399306 NACAE9PAV3 2078 aa12.4□□□□□ -0.42
CTNS-203ENST00000399306 TMSB15BA0A087X1C1 80 aa12.39□□□□□ -0.43
CTNS-203ENST00000399306 LCE6AA0A183 80 aa12.39□□□□□ -0.43
CTNS-203ENST00000399306 GRIFINA4D1Z8 144 aa12.39□□□□□ -0.43
CTNS-203ENST00000399306 CEBPGP53567 150 aa12.39□□□□□ -0.43
CTNS-203ENST00000399306 LGALS9CQ6DKI2 356 aa12.39□□□□□ -0.43
CTNS-203ENST00000399306 LINC01551Q86U37 167 aa12.39□□□□□ -0.43
CTNS-203ENST00000399306 ZFP82Q8N141 532 aa12.39□□□□□ -0.43
CTNS-203ENST00000399306 POM121L12Q8N7R1 296 aa12.39□□□□□ -0.43
CTNS-203ENST00000399306 NUDT10Q8NFP7 164 aa12.39□□□□□ -0.43
CTNS-203ENST00000399306 OR2D3Q8NGH3 330 aa12.39□□□□□ -0.43
CTNS-203ENST00000399306 NUDT11Q96G61 164 aa12.39□□□□□ -0.43
CTNS-203ENST00000399306 PRO0255Q9UI72 69 aa12.39□□□□□ -0.43
CTNS-203ENST00000399306 PHLDA3Q9Y5J5 127 aa12.39□□□□□ -0.43
CTNS-203ENST00000399306 SACSQ9NZJ4 4579 aa12.38□□□□□ -0.43
CTNS-203ENST00000399306 C9JQL5 133 aa12.38□□□□□ -0.43
CTNS-203ENST00000399306 NXPH4O95158 308 aa12.38□□□□□ -0.43
CTNS-203ENST00000399306 RPL19P84098 196 aaKnown RBP12.38□□□□□ -0.43
CTNS-203ENST00000399306 SRSF3P84103 164 aaKnown RBP12.38□□□□□ -0.43
CTNS-203ENST00000399306 FHL2Q14192 279 aa12.38□□□□□ -0.43
CTNS-203ENST00000399306 TMEM241Q24JQ0 296 aa12.38□□□□□ -0.43
CTNS-203ENST00000399306 ZFP2Q6ZN57 461 aa12.38□□□□□ -0.43
CTNS-203ENST00000399306 A0A1W2PPQ1 181 aa12.37□□□□□ -0.43
CTNS-203ENST00000399306 IGLC6P0CF74 106 aa12.37□□□□□ -0.43
CTNS-203ENST00000399306 CT83Q5H943 113 aa12.37□□□□□ -0.43
CTNS-203ENST00000399306 SOHLH1Q5JUK2 328 aa12.37□□□□□ -0.43
CTNS-203ENST00000399306 CFAP126Q5VTH2 177 aa12.37□□□□□ -0.43
CTNS-203ENST00000399306 LINC00476Q8WZB0 136 aa12.37□□□□□ -0.43
CTNS-203ENST00000399306 ZNF479Q96JC4 524 aa12.37□□□□□ -0.43
CTNS-203ENST00000399306 NAT8Q9UHE5 227 aa12.37□□□□□ -0.43
CTNS-203ENST00000399306 TRAV26-1A0A087WT03 109 aa12.36□□□□□ -0.43
CTNS-203ENST00000399306 TRGV4A0A0C4DH28 118 aa12.36□□□□□ -0.43
CTNS-203ENST00000399306 F2Z2F3 143 aa12.36□□□□□ -0.43
CTNS-203ENST00000399306 DMRTA1Q5VZB9 504 aa12.36□□□□□ -0.43
CTNS-203ENST00000399306 WDR73Q6P4I2 378 aa12.36□□□□□ -0.43
CTNS-203ENST00000399306 RPP21Q9H633 154 aaKnown RBP12.36□□□□□ -0.43
CTNS-203ENST00000399306 HHLA3Q9XRX5 114 aa12.36□□□□□ -0.43
CTNS-203ENST00000399306 VPS13DQ5THJ4 4388 aa12.35□□□□□ -0.43
CTNS-203ENST00000399306 RHODO00212 210 aa12.35□□□□□ -0.43
CTNS-203ENST00000399306 P0DMU3 169 aa12.35□□□□□ -0.43
CTNS-203ENST00000399306 FAM231AP0DMU4 169 aa12.35□□□□□ -0.43
CTNS-203ENST00000399306 FAM231CP0DMU5 169 aa12.35□□□□□ -0.43
CTNS-203ENST00000399306 CRYBA4P53673 196 aa12.35□□□□□ -0.43
CTNS-203ENST00000399306 UQCC3Q6UW78 93 aa12.35□□□□□ -0.43
CTNS-203ENST00000399306 FER1L6-AS1Q8NA97 138 aa12.35□□□□□ -0.43
CTNS-203ENST00000399306 SFRP2Q96HF1 295 aa12.35□□□□□ -0.43
CTNS-203ENST00000399306 OSTCQ9NRP0 149 aa12.35□□□□□ -0.43
CTNS-203ENST00000399306 PAX4O43316 350 aa12.34□□□□□ -0.43
CTNS-203ENST00000399306 GATCO43716 136 aaKnown RBP12.34□□□□□ -0.43
CTNS-203ENST00000399306 IGHV3-53P01767 116 aa12.34□□□□□ -0.43
CTNS-203ENST00000399306 SFTA3P0C7M3 94 aa12.34□□□□□ -0.43
CTNS-203ENST00000399306 GATA1P15976 413 aaPredicted RBP12.34□□□□□ -0.43
CTNS-203ENST00000399306 VSIG2Q96IQ7 327 aa12.34□□□□□ -0.43
CTNS-203ENST00000399306 RNASE7Q9H1E1 156 aaKnown RBP12.34□□□□□ -0.43
CTNS-203ENST00000399306 TRBV6-4A0A1B0GX49 114 aa12.33□□□□□ -0.44
CTNS-203ENST00000399306 A8MWL6 223 aa12.33□□□□□ -0.44
CTNS-203ENST00000399306 FAM3BP58499 235 aaPredicted RBP12.33□□□□□ -0.44
CTNS-203ENST00000399306 ERVFC1-1P60608 527 aa12.33□□□□□ -0.44
CTNS-203ENST00000399306 CACNG7P62955 275 aa12.33□□□□□ -0.44
CTNS-203ENST00000399306 RNF212Q495C1 297 aa12.33□□□□□ -0.44
CTNS-203ENST00000399306 UFSP1Q6NVU6 142 aa12.33□□□□□ -0.44
CTNS-203ENST00000399306 FAM231BA6NCW3 169 aa12.32□□□□□ -0.44
CTNS-203ENST00000399306 M0R381 172 aa12.32□□□□□ -0.44
CTNS-203ENST00000399306 FOXA3P55318 350 aaPredicted RBP12.32□□□□□ -0.44
CTNS-203ENST00000399306 RPL23P62829 140 aaKnown RBP12.32□□□□□ -0.44
CTNS-203ENST00000399306 LCE2DQ5TA82 110 aaPredicted RBP12.32□□□□□ -0.44
CTNS-203ENST00000399306 SPANXN1Q5VSR9 72 aa12.32□□□□□ -0.44
CTNS-203ENST00000399306 OR10AG1Q8NH19 301 aa12.32□□□□□ -0.44
CTNS-203ENST00000399306 ISOC2Q96AB3 205 aa12.32□□□□□ -0.44
CTNS-203ENST00000399306 CNFNQ9BYD5 112 aa12.32□□□□□ -0.44
CTNS-203ENST00000399306 DNAH6Q9C0G6 4158 aa12.31□□□□□ -0.44
CTNS-203ENST00000399306 CTRLP40313 264 aa12.31□□□□□ -0.44
CTNS-203ENST00000399306 C15orf54Q8N8G6 183 aa12.31□□□□□ -0.44
CTNS-203ENST00000399306 GFRA4Q9GZZ7 299 aa12.31□□□□□ -0.44
CTNS-203ENST00000399306 ICOSQ9Y6W8 199 aa12.31□□□□□ -0.44
CTNS-203ENST00000399306 A0A0J9YY99 117 aa12.3□□□□□ -0.44
CTNS-203ENST00000399306 NUDT3O95989 172 aa12.3□□□□□ -0.44
CTNS-203ENST00000399306 CRYGDP07320 174 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms