RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ZNF506Q5JVG8 444 aa9.74□□□□□ -0.85
HLA-DQB1-202ENST00000399079 TMSB15BA0A087X1C1 80 aa9.73□□□□□ -0.85
HLA-DQB1-202ENST00000399079 GRIFINA4D1Z8 144 aa9.73□□□□□ -0.85
HLA-DQB1-202ENST00000399079 ASIPP42127 132 aa9.73□□□□□ -0.85
HLA-DQB1-202ENST00000399079 RPL35P42766 123 aaKnown RBP9.73□□□□□ -0.85
HLA-DQB1-202ENST00000399079 CFAP126Q5VTH2 177 aa9.73□□□□□ -0.85
HLA-DQB1-202ENST00000399079 BAGE2Q86Y30 109 aa9.73□□□□□ -0.85
HLA-DQB1-202ENST00000399079 MLST8Q9BVC4 326 aa9.73□□□□□ -0.85
HLA-DQB1-202ENST00000399079 ICOSQ9Y6W8 199 aa9.73□□□□□ -0.85
HLA-DQB1-202ENST00000399079 IGHV3-73A0A0B4J1V6 119 aa9.72□□□□□ -0.85
HLA-DQB1-202ENST00000399079 H3BVH4 76 aa9.72□□□□□ -0.85
HLA-DQB1-202ENST00000399079 S100A9P06702 114 aaKnown RBP9.72□□□□□ -0.85
HLA-DQB1-202ENST00000399079 Q9H8V8 135 aa9.72□□□□□ -0.85
HLA-DQB1-202ENST00000399079 LOC100131303A0A0U1RQF7 123 aa9.72□□□□□ -0.85
HLA-DQB1-202ENST00000399079 K7EQD1 137 aa9.72□□□□□ -0.85
HLA-DQB1-202ENST00000399079 RTL8CO15255 209 aa9.72□□□□□ -0.85
HLA-DQB1-202ENST00000399079 GYPEP15421 78 aa9.72□□□□□ -0.85
HLA-DQB1-202ENST00000399079 MEF2BQ02080 365 aaPredicted RBP9.72□□□□□ -0.85
HLA-DQB1-202ENST00000399079 LINC01559Q495D7 138 aa9.72□□□□□ -0.85
HLA-DQB1-202ENST00000399079 C11orf52Q96A22 123 aa9.72□□□□□ -0.85
HLA-DQB1-202ENST00000399079 IL36BQ9NZH7 164 aa9.72□□□□□ -0.85
HLA-DQB1-202ENST00000399079 NBDYA0A0U1RRE5 68 aa9.71□□□□□ -0.86
HLA-DQB1-202ENST00000399079 RS1O15537 224 aa9.71□□□□□ -0.86
HLA-DQB1-202ENST00000399079 ARMS2P0C7Q2 107 aa9.71□□□□□ -0.86
HLA-DQB1-202ENST00000399079 RPL19P84098 196 aaKnown RBP9.71□□□□□ -0.86
HLA-DQB1-202ENST00000399079 MRPL23Q16540 153 aaKnown RBP9.71□□□□□ -0.86
HLA-DQB1-202ENST00000399079 PRR27Q6MZM9 219 aa9.71□□□□□ -0.86
HLA-DQB1-202ENST00000399079 PTH2Q96A98 100 aa9.71□□□□□ -0.86
HLA-DQB1-202ENST00000399079 TXNDC17Q9BRA2 123 aa9.71□□□□□ -0.86
HLA-DQB1-202ENST00000399079 JPT2Q9H910 190 aa9.71□□□□□ -0.86
HLA-DQB1-202ENST00000399079 BCL2P10415 239 aa9.7□□□□□ -0.86
HLA-DQB1-202ENST00000399079 GATA1P15976 413 aaPredicted RBP9.7□□□□□ -0.86
HLA-DQB1-202ENST00000399079 DNLZQ5SXM8 178 aa9.7□□□□□ -0.86
HLA-DQB1-202ENST00000399079 UPK3BQ9BT76 320 aa9.7□□□□□ -0.86
HLA-DQB1-202ENST00000399079 MRPS16Q9Y3D3 137 aaKnown RBP9.7□□□□□ -0.86
HLA-DQB1-202ENST00000399079 FAT2Q9NYQ8 4349 aa9.7□□□□□ -0.86
HLA-DQB1-202ENST00000399079 HECTD4Q9Y4D8 3996 aa9.69□□□□□ -0.86
HLA-DQB1-202ENST00000399079 RAB19A4D1S5 217 aa9.69□□□□□ -0.86
HLA-DQB1-202ENST00000399079 IFNA1P01562 189 aa9.69□□□□□ -0.86
HLA-DQB1-202ENST00000399079 SRIP30626 198 aa9.69□□□□□ -0.86
HLA-DQB1-202ENST00000399079 LYPD5Q6UWN5 251 aa9.69□□□□□ -0.86
HLA-DQB1-202ENST00000399079 NEGR1Q7Z3B1 354 aa9.69□□□□□ -0.86
HLA-DQB1-202ENST00000399079 SLC25A29Q8N8R3 303 aa9.69□□□□□ -0.86
HLA-DQB1-202ENST00000399079 PDE6DO43924 150 aa9.68□□□□□ -0.86
HLA-DQB1-202ENST00000399079 IGLV2-8P01709 118 aa9.68□□□□□ -0.86
HLA-DQB1-202ENST00000399079 CENPWQ5EE01 88 aa9.68□□□□□ -0.86
HLA-DQB1-202ENST00000399079 PCNPQ8WW12 178 aaKnown RBP9.68□□□□□ -0.86
HLA-DQB1-202ENST00000399079 SAMD10Q9BYL1 202 aa9.68□□□□□ -0.86
HLA-DQB1-202ENST00000399079 KRTAP1-5Q9BYS1 174 aa9.68□□□□□ -0.86
HLA-DQB1-202ENST00000399079 MED9Q9NWA0 146 aa9.68□□□□□ -0.86
HLA-DQB1-202ENST00000399079 VAX2Q9UIW0 290 aa9.68□□□□□ -0.86
HLA-DQB1-202ENST00000399079 TRBV20OR9-2A0A075B6H5 130 aa9.67□□□□□ -0.86
HLA-DQB1-202ENST00000399079 C1orf134Q5TEV5 83 aa9.67□□□□□ -0.86
HLA-DQB1-202ENST00000399079 Q6ZSN1 163 aa9.67□□□□□ -0.86
HLA-DQB1-202ENST00000399079 PARLQ9H300 379 aa9.67□□□□□ -0.86
HLA-DQB1-202ENST00000399079 SCRT2Q9NQ03 307 aa9.67□□□□□ -0.86
HLA-DQB1-202ENST00000399079 PHLDA3Q9Y5J5 127 aa9.67□□□□□ -0.86
HLA-DQB1-202ENST00000399079 BIRC6Q9NR09 4857 aa9.67□□□□□ -0.86
HLA-DQB1-202ENST00000399079 A8MWV9 139 aa9.66□□□□□ -0.86
HLA-DQB1-202ENST00000399079 M0R381 172 aa9.66□□□□□ -0.86
HLA-DQB1-202ENST00000399079 MGST1P10620 155 aaKnown RBP9.66□□□□□ -0.86
HLA-DQB1-202ENST00000399079 BLOC1S1P78537 153 aa9.66□□□□□ -0.86
HLA-DQB1-202ENST00000399079 PRSS29PA6NIE9 313 aa9.66□□□□□ -0.86
HLA-DQB1-202ENST00000399079 CIDEAO60543 219 aa9.66□□□□□ -0.86
HLA-DQB1-202ENST00000399079 NXPH4O95158 308 aa9.66□□□□□ -0.86
HLA-DQB1-202ENST00000399079 GNG4P50150 75 aa9.66□□□□□ -0.86
HLA-DQB1-202ENST00000399079 PIK3CD-AS1Q5SR53 167 aa9.66□□□□□ -0.86
HLA-DQB1-202ENST00000399079 UFSP1Q6NVU6 142 aa9.66□□□□□ -0.86
HLA-DQB1-202ENST00000399079 LINC00336Q6ZUF6 198 aa9.66□□□□□ -0.86
HLA-DQB1-202ENST00000399079 LYPD6BQ8NI32 183 aa9.66□□□□□ -0.86
HLA-DQB1-202ENST00000399079 MUC21A0A0G2JKD1 596 aa9.65□□□□□ -0.86
HLA-DQB1-202ENST00000399079 MUC21A0A140T8X8 626 aa9.65□□□□□ -0.86
HLA-DQB1-202ENST00000399079 TRBV6-4A0A1B0GX49 114 aa9.65□□□□□ -0.86
HLA-DQB1-202ENST00000399079 SIVA1O15304 175 aa9.65□□□□□ -0.86
HLA-DQB1-202ENST00000399079 SYT8Q8NBV8 401 aa9.65□□□□□ -0.86
HLA-DQB1-202ENST00000399079 Q9UF83 564 aa9.65□□□□□ -0.86
HLA-DQB1-202ENST00000399079 A0A087WWL8 130 aa9.64□□□□□ -0.87
HLA-DQB1-202ENST00000399079 RBFOX3A6NFN3 312 aa9.64□□□□□ -0.87
HLA-DQB1-202ENST00000399079 TAGLN2P37802 199 aaKnown RBP9.64□□□□□ -0.87
HLA-DQB1-202ENST00000399079 RHOHQ15669 191 aa9.64□□□□□ -0.87
HLA-DQB1-202ENST00000399079 FAM74A4Q5TZK3 123 aa9.64□□□□□ -0.87
HLA-DQB1-202ENST00000399079 ZFP2Q6ZN57 461 aa9.64□□□□□ -0.87
HLA-DQB1-202ENST00000399079 OR10AG1Q8NH19 301 aa9.64□□□□□ -0.87
HLA-DQB1-202ENST00000399079 PRADC1Q9BSG0 188 aa9.64□□□□□ -0.87
HLA-DQB1-202ENST00000399079 DNAH17Q9UFH2 4485 aa9.64□□□□□ -0.87
HLA-DQB1-202ENST00000399079 SSTP61278 116 aa9.63□□□□□ -0.87
HLA-DQB1-202ENST00000399079 SOHLH1Q5JUK2 328 aa9.63□□□□□ -0.87
HLA-DQB1-202ENST00000399079 WFDC10BQ8IUB3 73 aa9.63□□□□□ -0.87
HLA-DQB1-202ENST00000399079 ZFP82Q8N141 532 aa9.63□□□□□ -0.87
HLA-DQB1-202ENST00000399079 C6orf223Q8N319 242 aa9.63□□□□□ -0.87
HLA-DQB1-202ENST00000399079 SFRP2Q96HF1 295 aa9.63□□□□□ -0.87
HLA-DQB1-202ENST00000399079 A0A1B0GVY2 172 aa9.62□□□□□ -0.87
HLA-DQB1-202ENST00000399079 CRYGDP07320 174 aa9.62□□□□□ -0.87
HLA-DQB1-202ENST00000399079 GZMBP10144 247 aa9.62□□□□□ -0.87
HLA-DQB1-202ENST00000399079 TTC32Q5I0X7 151 aa9.62□□□□□ -0.87
HLA-DQB1-202ENST00000399079 C14orf178Q8N769 122 aaPredicted RBP9.62□□□□□ -0.87
HLA-DQB1-202ENST00000399079 SMIM12Q96EX1 92 aa9.62□□□□□ -0.87
HLA-DQB1-202ENST00000399079 PKHD1P08F94 4074 aa9.62□□□□□ -0.87
HLA-DQB1-202ENST00000399079 C19orf71A6NCJ1 209 aa9.61□□□□□ -0.87
HLA-DQB1-202ENST00000399079 CXCL1P09341 107 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms