RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 DYNLRB2Q8TF09 96 aa19.19■□□□□ 0.66
SHARPIN-202ENST00000398712 IGKV3-20P01619 116 aa19.18■□□□□ 0.66
SHARPIN-202ENST00000398712 DPH3P1Q9H4G8 78 aa19.18■□□□□ 0.66
SHARPIN-202ENST00000398712 C16orf95Q9H693 158 aa19.18■□□□□ 0.66
SHARPIN-202ENST00000398712 TLN2Q9Y4G6 2542 aa19.17■□□□□ 0.66
SHARPIN-202ENST00000398712 CYSRT1A8MQ03 144 aa19.17■□□□□ 0.66
SHARPIN-202ENST00000398712 GATA1P15976 413 aaPredicted RBP19.17■□□□□ 0.66
SHARPIN-202ENST00000398712 PRSS47A8MTI9 375 aa19.16■□□□□ 0.66
SHARPIN-202ENST00000398712 NXPH4O95158 308 aa19.16■□□□□ 0.66
SHARPIN-202ENST00000398712 ZNF418Q8TF45 676 aaPredicted RBP19.16■□□□□ 0.66
SHARPIN-202ENST00000398712 AP1S3Q96PC3 154 aa19.16■□□□□ 0.66
SHARPIN-202ENST00000398712 DEFB125Q8N687 156 aa19.16■□□□□ 0.66
SHARPIN-202ENST00000398712 Q8N8P6 123 aa19.16■□□□□ 0.66
SHARPIN-202ENST00000398712 NRACQ8N912 160 aa19.16■□□□□ 0.66
SHARPIN-202ENST00000398712 CD7P09564 240 aa19.15■□□□□ 0.66
SHARPIN-202ENST00000398712 LINC01545Q5VT33 79 aa19.14■□□□□ 0.66
SHARPIN-202ENST00000398712 TMEM61Q8N0U2 210 aa19.14■□□□□ 0.66
SHARPIN-202ENST00000398712 RAX2Q96IS3 184 aa19.14■□□□□ 0.66
SHARPIN-202ENST00000398712 TRAV26-2A0A0B4J265 109 aa19.14■□□□□ 0.65
SHARPIN-202ENST00000398712 SPINK13Q1W4C9 94 aa19.14■□□□□ 0.65
SHARPIN-202ENST00000398712 LBHQ53QV2 105 aaPredicted RBP19.14■□□□□ 0.65
SHARPIN-202ENST00000398712 UQCR10Q9UDW1 63 aa19.14■□□□□ 0.65
SHARPIN-202ENST00000398712 TRAV12-2A0A075B6T6 113 aa19.13■□□□□ 0.65
SHARPIN-202ENST00000398712 H0Y8G0 127 aa19.13■□□□□ 0.65
SHARPIN-202ENST00000398712 SPRY2O43597 315 aa19.13■□□□□ 0.65
SHARPIN-202ENST00000398712 IGLC3P0DOY3 106 aa19.13■□□□□ 0.65
SHARPIN-202ENST00000398712 CD28P10747 220 aa19.13■□□□□ 0.65
SHARPIN-202ENST00000398712 DEFB131AP59861 70 aa19.13■□□□□ 0.65
SHARPIN-202ENST00000398712 MAJINQ3KP22 176 aa19.13■□□□□ 0.65
SHARPIN-202ENST00000398712 AMTNQ6UX39 209 aa19.13■□□□□ 0.65
SHARPIN-202ENST00000398712 AKAP9Q99996 3911 aa19.12■□□□□ 0.65
SHARPIN-202ENST00000398712 DEFB114Q30KQ6 69 aa19.12■□□□□ 0.65
SHARPIN-202ENST00000398712 C14orf178Q8N769 122 aaPredicted RBP19.12■□□□□ 0.65
SHARPIN-202ENST00000398712 LINC01006Q8NI28 216 aa19.12■□□□□ 0.65
SHARPIN-202ENST00000398712 SONP18583 2426 aaKnown RBP19.12■□□□□ 0.65
SHARPIN-202ENST00000398712 IGLV2-18A0A075B6J9 118 aa19.11■□□□□ 0.65
SHARPIN-202ENST00000398712 FCER1GP30273 86 aa19.11■□□□□ 0.65
SHARPIN-202ENST00000398712 FHL3Q13643 280 aa19.11■□□□□ 0.65
SHARPIN-202ENST00000398712 MRPL52Q86TS9 123 aaKnown RBP19.11■□□□□ 0.65
SHARPIN-202ENST00000398712 HLA-DRB4P13762 266 aa19.11■□□□□ 0.65
SHARPIN-202ENST00000398712 FXYD7P58549 80 aa19.11■□□□□ 0.65
SHARPIN-202ENST00000398712 HILS1P60008 231 aa19.11■□□□□ 0.65
SHARPIN-202ENST00000398712 TSSC4Q9Y5U2 329 aaPredicted RBP19.11■□□□□ 0.65
SHARPIN-202ENST00000398712 HLA-DRB4X5D2U9 266 aa19.11■□□□□ 0.65
SHARPIN-202ENST00000398712 MYO9AB2RTY4 2548 aa19.1■□□□□ 0.65
SHARPIN-202ENST00000398712 IGHV1OR15-1A0A075B7D0 117 aa19.1■□□□□ 0.65
SHARPIN-202ENST00000398712 A8MTW9 85 aa19.1■□□□□ 0.65
SHARPIN-202ENST00000398712 HIST2H2BDQ6DRA6 164 aa19.1■□□□□ 0.65
SHARPIN-202ENST00000398712 C11orf44Q8N8P7 122 aa19.1■□□□□ 0.65
SHARPIN-202ENST00000398712 A0A1W2PRX2 142 aa19.09■□□□□ 0.65
SHARPIN-202ENST00000398712 KNCNA6PVL3 124 aa19.09■□□□□ 0.65
SHARPIN-202ENST00000398712 HSBP1L1C9JCN9 74 aa19.09■□□□□ 0.65
SHARPIN-202ENST00000398712 CCL24O00175 119 aa19.09■□□□□ 0.65
SHARPIN-202ENST00000398712 IGLL1P15814 213 aa19.09■□□□□ 0.65
SHARPIN-202ENST00000398712 MAST4O15021 2626 aa19.09■□□□□ 0.65
SHARPIN-202ENST00000398712 IGHV3-16A0A0C4DH30 117 aa19.09■□□□□ 0.65
SHARPIN-202ENST00000398712 MGPP08493 103 aa19.09■□□□□ 0.65
SHARPIN-202ENST00000398712 IFI27L1Q96BM0 104 aa19.09■□□□□ 0.65
SHARPIN-202ENST00000398712 SPAG8Q99932 426 aaPredicted RBP19.09■□□□□ 0.65
SHARPIN-202ENST00000398712 M0R143 59 aa19.08■□□□□ 0.64
SHARPIN-202ENST00000398712 SMIM17P0DL12 118 aa19.08■□□□□ 0.64
SHARPIN-202ENST00000398712 C9orf85Q96MD7 179 aa19.08■□□□□ 0.64
SHARPIN-202ENST00000398712 ST20Q9HBF5 79 aa19.08■□□□□ 0.64
SHARPIN-202ENST00000398712 TRAV25A0A0B4J276 109 aa19.07■□□□□ 0.64
SHARPIN-202ENST00000398712 H3BMM0 161 aa19.07■□□□□ 0.64
SHARPIN-202ENST00000398712 PPP1R17O96001 155 aa19.07■□□□□ 0.64
SHARPIN-202ENST00000398712 POM121L12Q8N7R1 296 aa19.07■□□□□ 0.64
SHARPIN-202ENST00000398712 CITED2Q99967 270 aaPredicted RBP19.07■□□□□ 0.64
SHARPIN-202ENST00000398712 C20orf78Q9BR46 151 aa19.07■□□□□ 0.64
SHARPIN-202ENST00000398712 CD300EQ496F6 205 aaPredicted RBP19.06■□□□□ 0.64
SHARPIN-202ENST00000398712 C2orf88Q9BSF0 95 aa19.06■□□□□ 0.64
SHARPIN-202ENST00000398712 MCRIP2Q9BUT9 160 aaKnown RBP19.06■□□□□ 0.64
SHARPIN-202ENST00000398712 MAP6D1Q9H9H5 199 aa19.06■□□□□ 0.64
SHARPIN-202ENST00000398712 LAGE3Q14657 143 aa19.06■□□□□ 0.64
SHARPIN-202ENST00000398712 LGALS9BQ3B8N2 356 aa19.06■□□□□ 0.64
SHARPIN-202ENST00000398712 LGALS9CQ6DKI2 356 aa19.06■□□□□ 0.64
SHARPIN-202ENST00000398712 Q8N1Y9 231 aa19.06■□□□□ 0.64
SHARPIN-202ENST00000398712 SYT8Q8NBV8 401 aa19.06■□□□□ 0.64
SHARPIN-202ENST00000398712 RASL10AQ92737 203 aa19.06■□□□□ 0.64
SHARPIN-202ENST00000398712 SMIM2Q9BVW6 85 aa19.06■□□□□ 0.64
SHARPIN-202ENST00000398712 AGRNO00468 2067 aa19.05■□□□□ 0.64
SHARPIN-202ENST00000398712 OTOGQ6ZRI0 2925 aa19.05■□□□□ 0.64
SHARPIN-202ENST00000398712 JMJD8Q96S16 334 aa19.05■□□□□ 0.64
SHARPIN-202ENST00000398712 SNHG12Q9BXW3 62 aa19.05■□□□□ 0.64
SHARPIN-202ENST00000398712 MUC4Q99102 2169 aa19.05■□□□□ 0.64
SHARPIN-202ENST00000398712 TRGV11A0A075B6L2 103 aa19.04■□□□□ 0.64
SHARPIN-202ENST00000398712 Q6ZN92 141 aa19.04■□□□□ 0.64
SHARPIN-202ENST00000398712 KIF25-AS1Q9Y6Z4 181 aa19.04■□□□□ 0.64
SHARPIN-202ENST00000398712 hDV102S1A0JD36 115 aa19.04■□□□□ 0.64
SHARPIN-202ENST00000398712 EREGO14944 169 aa19.04■□□□□ 0.64
SHARPIN-202ENST00000398712 NDUFA7O95182 113 aa19.04■□□□□ 0.64
SHARPIN-202ENST00000398712 SUMO2P61956 95 aaKnown RBP19.04■□□□□ 0.64
SHARPIN-202ENST00000398712 TMEM158Q8WZ71 300 aa19.04■□□□□ 0.64
SHARPIN-202ENST00000398712 HNRNPA3P51991 378 aaKnown RBP19.03■□□□□ 0.64
SHARPIN-202ENST00000398712 PMCHL2Q9BQD1 86 aa19.03■□□□□ 0.64
SHARPIN-202ENST00000398712 MDFICQ9P1T7 246 aa19.03■□□□□ 0.64
SHARPIN-202ENST00000398712 SMR3AQ99954 134 aa19.02■□□□□ 0.64
SHARPIN-202ENST00000398712 GOLT1BQ9Y3E0 138 aa19.02■□□□□ 0.64
SHARPIN-202ENST00000398712 ZNF256Q9Y2P7 627 aaPredicted RBP19.01■□□□□ 0.63
SHARPIN-202ENST00000398712 K7EMI3 77 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms