RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 MRPL23Q16540 153 aaKnown RBP11.48□□□□□ -0.57
APTR-201ENST00000398043 ZNF506Q5JVG8 444 aa11.48□□□□□ -0.57
APTR-201ENST00000398043 FAM162BQ5T6X4 162 aa11.48□□□□□ -0.57
APTR-201ENST00000398043 CFAP126Q5VTH2 177 aa11.48□□□□□ -0.57
APTR-201ENST00000398043 KRTAP1-5Q9BYS1 174 aa11.48□□□□□ -0.57
APTR-201ENST00000398043 HECTD4Q9Y4D8 3996 aa11.47□□□□□ -0.57
APTR-201ENST00000398043 C9JCJ5 164 aa11.47□□□□□ -0.57
APTR-201ENST00000398043 S100A9P06702 114 aaKnown RBP11.47□□□□□ -0.57
APTR-201ENST00000398043 PIK3CD-AS1Q5SR53 167 aa11.47□□□□□ -0.57
APTR-201ENST00000398043 C11orf52Q96A22 123 aa11.47□□□□□ -0.57
APTR-201ENST00000398043 MANBALQ9NQG1 85 aa11.47□□□□□ -0.57
APTR-201ENST00000398043 IL36BQ9NZH7 164 aa11.47□□□□□ -0.57
APTR-201ENST00000398043 B4DEV8 164 aa11.46□□□□□ -0.57
APTR-201ENST00000398043 ORM1P02763 201 aa11.46□□□□□ -0.57
APTR-201ENST00000398043 ASIPP42127 132 aa11.46□□□□□ -0.57
APTR-201ENST00000398043 LINC01559Q495D7 138 aa11.46□□□□□ -0.57
APTR-201ENST00000398043 C1orf134Q5TEV5 83 aa11.46□□□□□ -0.57
APTR-201ENST00000398043 LYPD5Q6UWN5 251 aa11.46□□□□□ -0.57
APTR-201ENST00000398043 GNG13Q9P2W3 67 aa11.46□□□□□ -0.57
APTR-201ENST00000398043 PRSS29PA6NIE9 313 aa11.45□□□□□ -0.58
APTR-201ENST00000398043 CIDEAO60543 219 aa11.45□□□□□ -0.58
APTR-201ENST00000398043 GYPEP15421 78 aa11.45□□□□□ -0.58
APTR-201ENST00000398043 NEGR1Q7Z3B1 354 aa11.45□□□□□ -0.58
APTR-201ENST00000398043 NHLRC2Q8NBF2 726 aa11.45□□□□□ -0.58
APTR-201ENST00000398043 SCRT2Q9NQ03 307 aa11.45□□□□□ -0.58
APTR-201ENST00000398043 LOC100131303A0A0U1RQF7 123 aa11.44□□□□□ -0.58
APTR-201ENST00000398043 M0R036 132 aa11.44□□□□□ -0.58
APTR-201ENST00000398043 UFSP1Q6NVU6 142 aa11.44□□□□□ -0.58
APTR-201ENST00000398043 DERL1Q9BUN8 251 aa11.44□□□□□ -0.58
APTR-201ENST00000398043 A0A1W2PPQ1 181 aa11.43□□□□□ -0.58
APTR-201ENST00000398043 H3BVH4 76 aa11.43□□□□□ -0.58
APTR-201ENST00000398043 ARMS2P0C7Q2 107 aa11.43□□□□□ -0.58
APTR-201ENST00000398043 S100A4P26447 101 aaKnown RBP11.43□□□□□ -0.58
APTR-201ENST00000398043 RPL35P42766 123 aaKnown RBP11.43□□□□□ -0.58
APTR-201ENST00000398043 BAGE2Q86Y30 109 aa11.43□□□□□ -0.58
APTR-201ENST00000398043 SLC25A29Q8N8R3 303 aa11.43□□□□□ -0.58
APTR-201ENST00000398043 TXNDC17Q9BRA2 123 aa11.43□□□□□ -0.58
APTR-201ENST00000398043 TRBV6-4A0A1B0GX49 114 aa11.42□□□□□ -0.58
APTR-201ENST00000398043 GRIFINA4D1Z8 144 aa11.42□□□□□ -0.58
APTR-201ENST00000398043 SRIP30626 198 aa11.42□□□□□ -0.58
APTR-201ENST00000398043 DMRTA1Q5VZB9 504 aa11.42□□□□□ -0.58
APTR-201ENST00000398043 C6orf223Q8N319 242 aa11.42□□□□□ -0.58
APTR-201ENST00000398043 PARLQ9H300 379 aa11.42□□□□□ -0.58
APTR-201ENST00000398043 JPT2Q9H910 190 aa11.42□□□□□ -0.58
APTR-201ENST00000398043 TEX46H3BTG2 121 aa11.41□□□□□ -0.58
APTR-201ENST00000398043 NXPH4O95158 308 aa11.41□□□□□ -0.58
APTR-201ENST00000398043 IGLV2-8P01709 118 aa11.41□□□□□ -0.58
APTR-201ENST00000398043 TTC32Q5I0X7 151 aa11.41□□□□□ -0.58
APTR-201ENST00000398043 SOHLH1Q5JUK2 328 aa11.41□□□□□ -0.58
APTR-201ENST00000398043 ZFP2Q6ZN57 461 aa11.41□□□□□ -0.58
APTR-201ENST00000398043 Q6ZSN1 163 aa11.41□□□□□ -0.58
APTR-201ENST00000398043 PKD1P98161 4303 aa11.41□□□□□ -0.58
APTR-201ENST00000398043 PKHD1P08F94 4074 aa11.4□□□□□ -0.58
APTR-201ENST00000398043 IGHV3-73A0A0B4J1V6 119 aa11.4□□□□□ -0.58
APTR-201ENST00000398043 A8MWV9 139 aa11.4□□□□□ -0.58
APTR-201ENST00000398043 SIVA1O15304 175 aa11.4□□□□□ -0.58
APTR-201ENST00000398043 BCL2P10415 239 aa11.4□□□□□ -0.58
APTR-201ENST00000398043 MEF2BQ02080 365 aaPredicted RBP11.4□□□□□ -0.58
APTR-201ENST00000398043 PCNPQ8WW12 178 aaKnown RBP11.4□□□□□ -0.58
APTR-201ENST00000398043 SAMD10Q9BYL1 202 aa11.4□□□□□ -0.58
APTR-201ENST00000398043 TMSB15BA0A087X1C1 80 aa11.39□□□□□ -0.59
APTR-201ENST00000398043 CXCL1P09341 107 aa11.39□□□□□ -0.59
APTR-201ENST00000398043 MED14OSP0DP75 135 aa11.39□□□□□ -0.59
APTR-201ENST00000398043 MGST1P10620 155 aaKnown RBP11.39□□□□□ -0.59
APTR-201ENST00000398043 NKX2-5P52952 324 aaPredicted RBP11.39□□□□□ -0.59
APTR-201ENST00000398043 TIRAPP58753 221 aa11.39□□□□□ -0.59
APTR-201ENST00000398043 RPL19P84098 196 aaKnown RBP11.39□□□□□ -0.59
APTR-201ENST00000398043 ALKAL2Q6UX46 152 aa11.39□□□□□ -0.59
APTR-201ENST00000398043 LYPD6BQ8NI32 183 aa11.39□□□□□ -0.59
APTR-201ENST00000398043 TRBV20OR9-2A0A075B6H5 130 aa11.38□□□□□ -0.59
APTR-201ENST00000398043 LINC00694P0DN24 101 aa11.38□□□□□ -0.59
APTR-201ENST00000398043 BTF3P20290 206 aaKnown RBP11.38□□□□□ -0.59
APTR-201ENST00000398043 TNP2Q05952 138 aa11.38□□□□□ -0.59
APTR-201ENST00000398043 RHOHQ15669 191 aa11.38□□□□□ -0.59
APTR-201ENST00000398043 SH2D6Q7Z4S9 175 aa11.38□□□□□ -0.59
APTR-201ENST00000398043 SSBP4Q9BWG4 385 aaPredicted RBP11.38□□□□□ -0.59
APTR-201ENST00000398043 VAX2Q9UIW0 290 aa11.38□□□□□ -0.59
APTR-201ENST00000398043 RAB19A4D1S5 217 aa11.37□□□□□ -0.59
APTR-201ENST00000398043 PDE6DO43924 150 aa11.37□□□□□ -0.59
APTR-201ENST00000398043 IFNA1P01562 189 aa11.37□□□□□ -0.59
APTR-201ENST00000398043 CRYGDP07320 174 aa11.37□□□□□ -0.59
APTR-201ENST00000398043 CENPWQ5EE01 88 aa11.37□□□□□ -0.59
APTR-201ENST00000398043 WFDC10BQ8IUB3 73 aa11.37□□□□□ -0.59
APTR-201ENST00000398043 SFRP2Q96HF1 295 aa11.37□□□□□ -0.59
APTR-201ENST00000398043 PRADC1Q9BSG0 188 aa11.37□□□□□ -0.59
APTR-201ENST00000398043 Q9UF83 564 aa11.37□□□□□ -0.59
APTR-201ENST00000398043 BOLA1Q9Y3E2 137 aa11.37□□□□□ -0.59
APTR-201ENST00000398043 SNAI2O43623 268 aa11.36□□□□□ -0.59
APTR-201ENST00000398043 Q6ZRN7 208 aaPredicted RBP11.36□□□□□ -0.59
APTR-201ENST00000398043 SYT8Q8NBV8 401 aa11.36□□□□□ -0.59
APTR-201ENST00000398043 SMIM12Q96EX1 92 aa11.36□□□□□ -0.59
APTR-201ENST00000398043 PHLDA3Q9Y5J5 127 aa11.36□□□□□ -0.59
APTR-201ENST00000398043 C19orf71A6NCJ1 209 aa11.35□□□□□ -0.59
APTR-201ENST00000398043 DNAH10OSP0CZ25 163 aa11.35□□□□□ -0.59
APTR-201ENST00000398043 TAGLN2P37802 199 aaKnown RBP11.35□□□□□ -0.59
APTR-201ENST00000398043 PRR27Q6MZM9 219 aa11.35□□□□□ -0.59
APTR-201ENST00000398043 M0R381 172 aa11.34□□□□□ -0.59
APTR-201ENST00000398043 RHODO00212 210 aa11.34□□□□□ -0.59
APTR-201ENST00000398043 OR5AL1P0C617 328 aa11.34□□□□□ -0.59
APTR-201ENST00000398043 LINC00315P59091 139 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms