RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 PRM2P04554 102 aa11.54□□□□□ -0.56
MCF2L-205ENST00000397017 SNHG12Q9BXW3 62 aa11.54□□□□□ -0.56
MCF2L-205ENST00000397017 C19orf71A6NCJ1 209 aa11.54□□□□□ -0.56
MCF2L-205ENST00000397017 RASL11AQ6T310 242 aa11.54□□□□□ -0.56
MCF2L-205ENST00000397017 NDUFAF3Q9BU61 184 aa11.54□□□□□ -0.56
MCF2L-205ENST00000397017 HBDP02042 147 aa11.54□□□□□ -0.56
MCF2L-205ENST00000397017 PSMB8P28062 276 aa11.54□□□□□ -0.56
MCF2L-205ENST00000397017 Q0VG73 95 aa11.54□□□□□ -0.56
MCF2L-205ENST00000397017 TDRG1Q3Y452 100 aa11.54□□□□□ -0.56
MCF2L-205ENST00000397017 POLR3KQ9Y2Y1 108 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-205ENST00000397017 MGAM2Q2M2H8 2515 aa11.53□□□□□ -0.56
MCF2L-205ENST00000397017 GPHB5Q86YW7 130 aa11.53□□□□□ -0.56
MCF2L-205ENST00000397017 TMEM158Q8WZ71 300 aa11.53□□□□□ -0.56
MCF2L-205ENST00000397017 JPT2Q9H910 190 aa11.53□□□□□ -0.56
MCF2L-205ENST00000397017 TNFRSF18Q9Y5U5 241 aa11.53□□□□□ -0.56
MCF2L-205ENST00000397017 SVEP1Q4LDE5 3571 aa11.53□□□□□ -0.56
MCF2L-205ENST00000397017 SAMD13Q5VXD3 122 aa11.53□□□□□ -0.56
MCF2L-205ENST00000397017 Q6ZVH6 145 aa11.53□□□□□ -0.56
MCF2L-205ENST00000397017 PHLDA1Q8WV24 401 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-205ENST00000397017 TRAV8-2A0A0B4J237 113 aa11.52□□□□□ -0.56
MCF2L-205ENST00000397017 SCGB1D4Q6XE38 83 aa11.52□□□□□ -0.56
MCF2L-205ENST00000397017 IFI27L1Q96BM0 104 aa11.52□□□□□ -0.56
MCF2L-205ENST00000397017 SIGLEC8Q9NYZ4 499 aa11.52□□□□□ -0.57
MCF2L-205ENST00000397017 FAM231BA6NCW3 169 aa11.52□□□□□ -0.57
MCF2L-205ENST00000397017 LY6G6DO95868 133 aa11.52□□□□□ -0.57
MCF2L-205ENST00000397017 OR2K2Q8NGT1 345 aa11.52□□□□□ -0.57
MCF2L-205ENST00000397017 C2orf88Q9BSF0 95 aa11.52□□□□□ -0.57
MCF2L-205ENST00000397017 IGKV3D-20A0A0C4DH25 116 aa11.51□□□□□ -0.57
MCF2L-205ENST00000397017 DPH3P1Q9H4G8 78 aa11.51□□□□□ -0.57
MCF2L-205ENST00000397017 ST20Q9HBF5 79 aa11.51□□□□□ -0.57
MCF2L-205ENST00000397017 CSTL1Q9H114 145 aa11.51□□□□□ -0.57
MCF2L-205ENST00000397017 UBR5O95071 2799 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-205ENST00000397017 DEFB130BP0DP73 79 aa11.51□□□□□ -0.57
MCF2L-205ENST00000397017 DEFB130AP0DP74 79 aa11.51□□□□□ -0.57
MCF2L-205ENST00000397017 PPBPP02775 128 aa11.5□□□□□ -0.57
MCF2L-205ENST00000397017 IGHV1OR15-1A0A075B7D0 117 aa11.5□□□□□ -0.57
MCF2L-205ENST00000397017 IGHV1-24A0A0C4DH33 117 aa11.5□□□□□ -0.57
MCF2L-205ENST00000397017 TSSC4Q9Y5U2 329 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-205ENST00000397017 TMEM170BQ5T4T1 132 aa11.5□□□□□ -0.57
MCF2L-205ENST00000397017 PSMG3-AS1Q96PY0 264 aa11.49□□□□□ -0.57
MCF2L-205ENST00000397017 STPG4Q8N801 248 aa11.49□□□□□ -0.57
MCF2L-205ENST00000397017 NXT2Q9NPJ8 142 aaKnown RBP11.49□□□□□ -0.57
MCF2L-205ENST00000397017 UQCR10Q9UDW1 63 aa11.49□□□□□ -0.57
MCF2L-205ENST00000397017 TP53TG3Q9ULZ0 132 aa11.49□□□□□ -0.57
MCF2L-205ENST00000397017 IGHV3-38A0A0C4DH36 116 aa11.49□□□□□ -0.57
MCF2L-205ENST00000397017 CHCHD1Q96BP2 118 aaKnown RBP11.49□□□□□ -0.57
MCF2L-205ENST00000397017 RPL39LQ96EH5 51 aaKnown RBP11.49□□□□□ -0.57
MCF2L-205ENST00000397017 NF1P21359 2839 aa11.48□□□□□ -0.57
MCF2L-205ENST00000397017 IGHV3-64A0A075B6Q5 118 aa11.48□□□□□ -0.57
MCF2L-205ENST00000397017 MRPS12O15235 138 aaKnown RBP11.48□□□□□ -0.57
MCF2L-205ENST00000397017 IGLV1-40P01703 118 aa11.48□□□□□ -0.57
MCF2L-205ENST00000397017 GTSCR1Q86UQ5 136 aa11.48□□□□□ -0.57
MCF2L-205ENST00000397017 MBD6Q96DN6 1003 aa11.48□□□□□ -0.57
MCF2L-205ENST00000397017 MRPL16Q9NX20 251 aaKnown RBP11.48□□□□□ -0.57
MCF2L-205ENST00000397017 MDFICQ9P1T7 246 aa11.48□□□□□ -0.57
MCF2L-205ENST00000397017 SPENQ96T58 3664 aaKnown RBP11.48□□□□□ -0.57
MCF2L-205ENST00000397017 SYS1-DBNDD2H3BUS1 97 aa11.48□□□□□ -0.57
MCF2L-205ENST00000397017 SLC25A34Q6PIV7 304 aa11.48□□□□□ -0.57
MCF2L-205ENST00000397017 RNASE8Q8TDE3 154 aaKnown RBP11.48□□□□□ -0.57
MCF2L-205ENST00000397017 TRGV11A0A075B6L2 103 aa11.48□□□□□ -0.57
MCF2L-205ENST00000397017 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-205ENST00000397017 PRR9Q5T870 116 aa11.48□□□□□ -0.57
MCF2L-205ENST00000397017 C3orf56Q8N813 242 aa11.47□□□□□ -0.57
MCF2L-205ENST00000397017 C11orf21Q9P2W6 132 aa11.47□□□□□ -0.57
MCF2L-205ENST00000397017 RAB37Q96AX2 223 aa11.47□□□□□ -0.57
MCF2L-205ENST00000397017 INSP01308 110 aa11.47□□□□□ -0.57
MCF2L-205ENST00000397017 Q8N1Y9 231 aa11.47□□□□□ -0.57
MCF2L-205ENST00000397017 LINC01006Q8NI28 216 aa11.47□□□□□ -0.57
MCF2L-205ENST00000397017 LBHQ53QV2 105 aaPredicted RBP11.46□□□□□ -0.57
MCF2L-205ENST00000397017 C9orf47Q6ZRZ4 202 aa11.46□□□□□ -0.57
MCF2L-205ENST00000397017 AMMECR1LQ6DCA0 310 aa11.46□□□□□ -0.57
MCF2L-205ENST00000397017 CSMD1Q96PZ7 3565 aa11.46□□□□□ -0.58
MCF2L-205ENST00000397017 K7EMT4 169 aa11.46□□□□□ -0.58
MCF2L-205ENST00000397017 APCP25054 2843 aa11.45□□□□□ -0.58
MCF2L-205ENST00000397017 CD5LO43866 347 aa11.45□□□□□ -0.58
MCF2L-205ENST00000397017 LAGE3Q14657 143 aa11.45□□□□□ -0.58
MCF2L-205ENST00000397017 WFDC10AQ9H1F0 79 aa11.45□□□□□ -0.58
MCF2L-205ENST00000397017 CELSR1Q9NYQ6 3014 aa11.45□□□□□ -0.58
MCF2L-205ENST00000397017 ATP6V0BQ99437 205 aa11.45□□□□□ -0.58
MCF2L-205ENST00000397017 A0A087X0K7 114 aa11.45□□□□□ -0.58
MCF2L-205ENST00000397017 RBAKDNA6NC62 111 aa11.45□□□□□ -0.58
MCF2L-205ENST00000397017 GCSHP23434 173 aa11.45□□□□□ -0.58
MCF2L-205ENST00000397017 TMEM97Q5BJF2 176 aa11.45□□□□□ -0.58
MCF2L-205ENST00000397017 TRAV9-2A0A087WT02 112 aa11.44□□□□□ -0.58
MCF2L-205ENST00000397017 NPIPB6E9PJ23 425 aa11.44□□□□□ -0.58
MCF2L-205ENST00000397017 SRSF9Q13242 221 aaKnown RBP eCLIP11.44□□□□□ -0.58
MCF2L-205ENST00000397017 TRGV4A0A0C4DH28 118 aa11.44□□□□□ -0.58
MCF2L-205ENST00000397017 GAS8-AS1O95177 125 aa11.44□□□□□ -0.58
MCF2L-205ENST00000397017 GAGE12BA1L429 117 aa11.44□□□□□ -0.58
MCF2L-205ENST00000397017 GAGE7O76087 117 aa11.44□□□□□ -0.58
MCF2L-205ENST00000397017 GAGE12FP0CL80 117 aa11.44□□□□□ -0.58
MCF2L-205ENST00000397017 GAGE12GP0CL81 117 aa11.44□□□□□ -0.58
MCF2L-205ENST00000397017 GAGE12IP0CL82 117 aa11.44□□□□□ -0.58
MCF2L-205ENST00000397017 SUMO2P61956 95 aaKnown RBP11.44□□□□□ -0.58
MCF2L-205ENST00000397017 FOXI2Q6ZQN5 318 aa11.44□□□□□ -0.58
MCF2L-205ENST00000397017 TMEM262E9PQX1 116 aa11.43□□□□□ -0.58
MCF2L-205ENST00000397017 ESM1Q9NQ30 184 aa11.43□□□□□ -0.58
MCF2L-205ENST00000397017 A0A0J9YX75 114 aa11.43□□□□□ -0.58
MCF2L-205ENST00000397017 ZNF415Q09FC8 603 aa11.43□□□□□ -0.58
MCF2L-205ENST00000397017 COA6Q5JTJ3 125 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms