RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 PRB2P02812 416 aaPredicted RBP11.04□□□□□ -0.64
COL4A3-202ENST00000396578 IGLC1P0CG04 106 aa11.04□□□□□ -0.64
COL4A3-202ENST00000396578 ZMAT4Q9H898 229 aa11.04□□□□□ -0.64
COL4A3-202ENST00000396578 Q6ZS92 163 aa11.04□□□□□ -0.64
COL4A3-202ENST00000396578 TPSG1Q9NRR2 321 aa11.04□□□□□ -0.64
COL4A3-202ENST00000396578 ZFP2Q6ZN57 461 aa11.04□□□□□ -0.64
COL4A3-202ENST00000396578 SVIPQ8NHG7 77 aa11.04□□□□□ -0.64
COL4A3-202ENST00000396578 IGKV3D-7A0A0C4DH55 119 aa11.04□□□□□ -0.64
COL4A3-202ENST00000396578 FAM120AOSQ5T036 256 aa11.04□□□□□ -0.64
COL4A3-202ENST00000396578 TRAV4A0A0B4J268 109 aa11.04□□□□□ -0.64
COL4A3-202ENST00000396578 ALPK3Q96L96 1907 aa11.03□□□□□ -0.64
COL4A3-202ENST00000396578 IGKV1OR2-108A0A075B7D4 117 aa11.03□□□□□ -0.64
COL4A3-202ENST00000396578 GNRH2O43555 120 aa11.03□□□□□ -0.64
COL4A3-202ENST00000396578 U3KQE9 123 aa11.03□□□□□ -0.64
COL4A3-202ENST00000396578 J3QLI3 93 aa11.03□□□□□ -0.64
COL4A3-202ENST00000396578 FOXE3Q13461 319 aa11.03□□□□□ -0.64
COL4A3-202ENST00000396578 TEN1Q86WV5 123 aa11.03□□□□□ -0.64
COL4A3-202ENST00000396578 LENEPQ9Y5L5 61 aa11.03□□□□□ -0.64
COL4A3-202ENST00000396578 CREBBPQ92793 2442 aa11.03□□□□□ -0.64
COL4A3-202ENST00000396578 NREPQ16612 68 aa11.02□□□□□ -0.64
COL4A3-202ENST00000396578 SND1-IT1Q9HBX3 110 aa11.02□□□□□ -0.64
COL4A3-202ENST00000396578 C15orf65H3BRN8 121 aa11.02□□□□□ -0.64
COL4A3-202ENST00000396578 OPRPNQ99935 248 aaPredicted RBP11.02□□□□□ -0.64
COL4A3-202ENST00000396578 IGLL5B9A064 214 aa11.02□□□□□ -0.65
COL4A3-202ENST00000396578 DAZ2Q13117 558 aaKnown RBP11.02□□□□□ -0.65
COL4A3-202ENST00000396578 DAZ4Q86SG3 579 aaKnown RBP11.02□□□□□ -0.65
COL4A3-202ENST00000396578 DAZ3Q9NR90 486 aaKnown RBP11.02□□□□□ -0.65
COL4A3-202ENST00000396578 NOTCH4Q99466 2003 aa11.02□□□□□ -0.65
COL4A3-202ENST00000396578 SPATA25Q9BR10 227 aa11.02□□□□□ -0.65
COL4A3-202ENST00000396578 Q6ZQT7 251 aa11.02□□□□□ -0.65
COL4A3-202ENST00000396578 DUX4L9Q6RFH8 374 aaPredicted RBP11.01□□□□□ -0.65
COL4A3-202ENST00000396578 H3BUA1 57 aa11.01□□□□□ -0.65
COL4A3-202ENST00000396578 FHL1Q13642 323 aa11.01□□□□□ -0.65
COL4A3-202ENST00000396578 Q96MF0 132 aa11.01□□□□□ -0.65
COL4A3-202ENST00000396578 ZNF503Q96F45 646 aa11.01□□□□□ -0.65
COL4A3-202ENST00000396578 KLF2Q9Y5W3 355 aaPredicted RBP11.01□□□□□ -0.65
COL4A3-202ENST00000396578 PROP1O75360 226 aa11□□□□□ -0.65
COL4A3-202ENST00000396578 ZNF491Q8N8L2 437 aa11□□□□□ -0.65
COL4A3-202ENST00000396578 RNF152Q8N8N0 203 aa11□□□□□ -0.65
COL4A3-202ENST00000396578 WDR86Q86TI4 376 aa11□□□□□ -0.65
COL4A3-202ENST00000396578 HIST2H2BCQ6DN03 193 aa11□□□□□ -0.65
COL4A3-202ENST00000396578 TANC1Q9C0D5 1861 aa11□□□□□ -0.65
COL4A3-202ENST00000396578 SEC61GP60059 68 aa11□□□□□ -0.65
COL4A3-202ENST00000396578 C5orf38Q86SI9 138 aa11□□□□□ -0.65
COL4A3-202ENST00000396578 MAPK1IP1LQ8NDC0 245 aa11□□□□□ -0.65
COL4A3-202ENST00000396578 PRR14LQ5THK1 2151 aa11□□□□□ -0.65
COL4A3-202ENST00000396578 MUSTN1Q8IVN3 82 aa10.99□□□□□ -0.65
COL4A3-202ENST00000396578 RPL39LQ96EH5 51 aaKnown RBP10.99□□□□□ -0.65
COL4A3-202ENST00000396578 C17orf77Q96MU5 243 aa10.99□□□□□ -0.65
COL4A3-202ENST00000396578 Q9HAA7 133 aa10.99□□□□□ -0.65
COL4A3-202ENST00000396578 PCNX3Q9H6A9 2034 aa10.99□□□□□ -0.65
COL4A3-202ENST00000396578 HIGD2BQ4VC39 106 aa10.99□□□□□ -0.65
COL4A3-202ENST00000396578 LOXP28300 417 aaPredicted RBP10.99□□□□□ -0.65
COL4A3-202ENST00000396578 CEP192Q8TEP8 1941 aa10.99□□□□□ -0.65
COL4A3-202ENST00000396578 COX7A2LO14548 114 aa10.99□□□□□ -0.65
COL4A3-202ENST00000396578 MRPL36Q9P0J6 103 aaKnown RBP10.99□□□□□ -0.65
COL4A3-202ENST00000396578 IL15RAQ13261 267 aa10.99□□□□□ -0.65
COL4A3-202ENST00000396578 A0A0J9YY99 117 aa10.98□□□□□ -0.65
COL4A3-202ENST00000396578 A4D1N5 150 aa10.98□□□□□ -0.65
COL4A3-202ENST00000396578 TIRAPP58753 221 aa10.98□□□□□ -0.65
COL4A3-202ENST00000396578 Q6ZR03 302 aa10.98□□□□□ -0.65
COL4A3-202ENST00000396578 IGLV3-9A0A075B6K5 115 aa10.98□□□□□ -0.65
COL4A3-202ENST00000396578 TMEM61Q8N0U2 210 aa10.98□□□□□ -0.65
COL4A3-202ENST00000396578 LYPD6BQ8NI32 183 aa10.98□□□□□ -0.65
COL4A3-202ENST00000396578 BRK1Q8WUW1 75 aa10.98□□□□□ -0.65
COL4A3-202ENST00000396578 JMJD7-PLA2G4BH0Y9G9 81 aa10.98□□□□□ -0.65
COL4A3-202ENST00000396578 CAMK2N2Q96S95 79 aa10.98□□□□□ -0.65
COL4A3-202ENST00000396578 ELANEP08246 267 aa10.98□□□□□ -0.65
COL4A3-202ENST00000396578 K7EQD1 137 aa10.97□□□□□ -0.65
COL4A3-202ENST00000396578 CDPF1Q6NVV7 123 aa10.97□□□□□ -0.65
COL4A3-202ENST00000396578 LGALS9O00182 355 aa10.97□□□□□ -0.65
COL4A3-202ENST00000396578 PRR20EP86478 221 aa10.97□□□□□ -0.65
COL4A3-202ENST00000396578 PRR20CP86479 221 aa10.97□□□□□ -0.65
COL4A3-202ENST00000396578 PRR20DP86480 221 aa10.97□□□□□ -0.65
COL4A3-202ENST00000396578 PRR20BP86481 221 aa10.97□□□□□ -0.65
COL4A3-202ENST00000396578 PRR20AP86496 221 aa10.97□□□□□ -0.65
COL4A3-202ENST00000396578 C1orf147Q96MC9 270 aaPredicted RBP10.97□□□□□ -0.65
COL4A3-202ENST00000396578 UNQ6494/PRO21346Q6UXR6 183 aa10.96□□□□□ -0.65
COL4A3-202ENST00000396578 ETV2O00321 342 aaPredicted RBP10.96□□□□□ -0.65
COL4A3-202ENST00000396578 C16orf74Q96GX8 76 aa10.96□□□□□ -0.65
COL4A3-202ENST00000396578 SP5Q6BEB4 398 aaPredicted RBP10.96□□□□□ -0.66
COL4A3-202ENST00000396578 TMEM256-PLSCR3K7ERE1 68 aa10.96□□□□□ -0.66
COL4A3-202ENST00000396578 HOXB4P17483 251 aaPredicted RBP10.96□□□□□ -0.66
COL4A3-202ENST00000396578 C9orf47Q6ZRZ4 202 aa10.96□□□□□ -0.66
COL4A3-202ENST00000396578 FOXI1Q12951 378 aa10.95□□□□□ -0.66
COL4A3-202ENST00000396578 TIMM17AQ99595 171 aa10.95□□□□□ -0.66
COL4A3-202ENST00000396578 WFDC2Q14508 124 aa10.95□□□□□ -0.66
COL4A3-202ENST00000396578 AGPAT4-IT1Q9H0P7 198 aa10.95□□□□□ -0.66
COL4A3-202ENST00000396578 ATP5G1P05496 136 aa10.95□□□□□ -0.66
COL4A3-202ENST00000396578 GYPEP15421 78 aa10.95□□□□□ -0.66
COL4A3-202ENST00000396578 HIGD1BQ9P298 99 aa10.95□□□□□ -0.66
COL4A3-202ENST00000396578 CCL24O00175 119 aa10.95□□□□□ -0.66
COL4A3-202ENST00000396578 CRYGBP07316 175 aa10.94□□□□□ -0.66
COL4A3-202ENST00000396578 GATA1P15976 413 aaPredicted RBP10.94□□□□□ -0.66
COL4A3-202ENST00000396578 DIAPH2-AS1Q14236 149 aa10.94□□□□□ -0.66
COL4A3-202ENST00000396578 LINC01620Q4KN68 170 aa10.94□□□□□ -0.66
COL4A3-202ENST00000396578 ARTNQ5T4W7 220 aa10.94□□□□□ -0.66
COL4A3-202ENST00000396578 COA6Q5JTJ3 125 aaKnown RBP10.94□□□□□ -0.66
COL4A3-202ENST00000396578 DSCAMO60469 2012 aa10.94□□□□□ -0.66
COL4A3-202ENST00000396578 SORL1Q92673 2214 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 796.9 ms