RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 COX14Q96I36 57 aa2.72□□□□□ -1.97
XRCC4-203ENST00000396027 FAM167A-AS1Q96KT0 104 aa2.72□□□□□ -1.97
XRCC4-203ENST00000396027 TIMM17AQ99595 171 aa2.72□□□□□ -1.97
XRCC4-203ENST00000396027 TMEM14BQ9NUH8 114 aa2.72□□□□□ -1.97
XRCC4-203ENST00000396027 RNF186Q9NXI6 227 aa2.72□□□□□ -1.97
XRCC4-203ENST00000396027 UBE2D4Q9Y2X8 147 aa2.72□□□□□ -1.97
XRCC4-203ENST00000396027 SPTBP11277 2137 aa2.71□□□□□ -1.97
XRCC4-203ENST00000396027 PCNX3Q9H6A9 2034 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 LOC389332A0A1B0GUA5 103 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 TMEM30CPA0ZSE6 113 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 TMEM202A6NGA9 273 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 H0YGX0 51 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 SOCS3O14543 225 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 NXPH3O95157 252 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 ARMS2P0C7Q2 107 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 CD28P10747 220 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 ZNF22P17026 224 aaPredicted RBP2.71□□□□□ -1.98
XRCC4-203ENST00000396027 ZNF137PP52743 207 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 ZNF138P52744 262 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 APOC4P55056 127 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 PRCDQ00LT1 54 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 TCF15Q12870 199 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 PIGYQ3MUY2 71 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 ZNF876PQ49A33 203 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 CEMP1Q6PRD7 247 aaPredicted RBP2.71□□□□□ -1.98
XRCC4-203ENST00000396027 LYPD5Q6UWN5 251 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 FP248Q71RG6 208 aaPredicted RBP2.71□□□□□ -1.98
XRCC4-203ENST00000396027 DEFB132Q7Z7B7 95 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 Q86TA4 180 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 LINC01561Q8N1V8 128 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 ZCCHC24Q8N2G6 241 aaKnown RBP2.71□□□□□ -1.98
XRCC4-203ENST00000396027 MAPKAPK5-AS1Q8N8E1 139 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 THAP8Q8NA92 274 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 WFDC11Q8NEX6 87 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 DCTN5Q9BTE1 182 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 UBL5Q9BZL1 73 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 CYP4F30PQ9H0H9 118 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 Q9Y3F1 56 aa2.71□□□□□ -1.98
XRCC4-203ENST00000396027 SPAG17Q6Q759 2223 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 IGHV4-4A0A075B6R2 117 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 IGHV1OR21-1A0A087WYE8 117 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 TRAV41A0A0B4J266 112 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 IGKV1-8A0A0C4DH67 115 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 IGKV1-6A0A0C4DH72 117 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 A0A1B0GW54 56 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 C19orf84I3L1E1 186 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 LEPROTO15243 131 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 NDUFA3O95167 84 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 CISD3P0C7P0 127 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 S100A4P26447 101 aaKnown RBP2.7□□□□□ -1.98
XRCC4-203ENST00000396027 UBE2E1P51965 193 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 ZNF134P52741 427 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 FAM27E3Q08E93 113 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 DEFB134Q4QY38 66 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 NRACQ8N912 160 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 UBE2E2Q96LR5 201 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 SMIM14Q96QK8 99 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 PRR25Q96S07 402 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 Q9H3A6 140 aa2.7□□□□□ -1.98
XRCC4-203ENST00000396027 PHPT1Q9NRX4 125 aaPredicted RBP2.7□□□□□ -1.98
XRCC4-203ENST00000396027 ABCA7Q8IZY2 2146 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 LOC100131303A0A0U1RQF7 123 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 C17orf98A8MV24 154 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 E7EQL1 145 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 OXTP01178 125 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 IGHV1-69P01742 117 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 IGHV4-39P01824 125 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 ZNF883P0CG24 379 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 UBE2AP49459 152 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 SEM1Q6ZVN7 128 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 VN1R4Q7Z5H5 301 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 PLXDC1Q8IUK5 500 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 C20orf197Q8N268 126 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 C3orf56Q8N813 242 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 ITLN1Q8WWA0 313 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 IMMP1LQ96LU5 166 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 SMIM2Q9BVW6 85 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 COL4A3Q01955 1670 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 MPDZO75970 2070 aa2.69□□□□□ -1.98
XRCC4-203ENST00000396027 IGLV2-18A0A075B6J9 118 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 IGKV1-12A0A0C4DH73 117 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 J3QT63 122 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 TRIAP1O43715 76 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 NDUFB1O75438 58 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 SNRNP200O75643 2136 aaKnown RBP2.68□□□□□ -1.98
XRCC4-203ENST00000396027 IGKV1D-16P01601 117 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 IGKV1D-12P01611 117 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 BAALC-AS2P0C853 105 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 SAA1P0DJI8 122 aaPredicted RBP2.68□□□□□ -1.98
XRCC4-203ENST00000396027 CD52P31358 61 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 HOXA4Q00056 320 aaPredicted RBP2.68□□□□□ -1.98
XRCC4-203ENST00000396027 CCL14Q16627 93 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 SFTA2Q6UW10 78 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 LYZL1Q6UWQ5 148 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 IGFL2Q6UWQ7 119 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 LCA10Q71F78 164 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 Q8N2B8 174 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 CD177Q8N6Q3 437 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 NKAPP1Q8N9T2 125 aa2.68□□□□□ -1.98
XRCC4-203ENST00000396027 TET1Q8NFU7 2136 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms