RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 HYDINQ4G0P3 5121 aa13.91□□□□□ -0.18
SNCA-203ENST00000394986 TRAV4A0A0B4J268 109 aa13.9□□□□□ -0.18
SNCA-203ENST00000394986 ARMS2P0C7Q2 107 aa13.9□□□□□ -0.18
SNCA-203ENST00000394986 FHL2Q14192 279 aa13.9□□□□□ -0.18
SNCA-203ENST00000394986 OR4C5Q8NGB2 326 aa13.9□□□□□ -0.18
SNCA-203ENST00000394986 VSIG2Q96IQ7 327 aa13.9□□□□□ -0.18
SNCA-203ENST00000394986 IL36BQ9NZH7 164 aa13.9□□□□□ -0.18
SNCA-203ENST00000394986 DNLZQ5SXM8 178 aa13.9□□□□□ -0.19
SNCA-203ENST00000394986 SMIM12Q96EX1 92 aa13.9□□□□□ -0.19
SNCA-203ENST00000394986 TRGV4A0A0C4DH28 118 aa13.89□□□□□ -0.19
SNCA-203ENST00000394986 C19orf71A6NCJ1 209 aa13.88□□□□□ -0.19
SNCA-203ENST00000394986 K7EN84 100 aa13.88□□□□□ -0.19
SNCA-203ENST00000394986 SRP19P09132 144 aaKnown RBP13.88□□□□□ -0.19
SNCA-203ENST00000394986 CFAP126Q5VTH2 177 aa13.88□□□□□ -0.19
SNCA-203ENST00000394986 MUC4Q99102 2169 aa13.87□□□□□ -0.19
SNCA-203ENST00000394986 IGHV3-73A0A0B4J1V6 119 aa13.87□□□□□ -0.19
SNCA-203ENST00000394986 RS1O15537 224 aa13.87□□□□□ -0.19
SNCA-203ENST00000394986 PAX4O43316 350 aa13.87□□□□□ -0.19
SNCA-203ENST00000394986 P0DMU3 169 aa13.87□□□□□ -0.19
SNCA-203ENST00000394986 FAM231AP0DMU4 169 aa13.87□□□□□ -0.19
SNCA-203ENST00000394986 FAM231CP0DMU5 169 aa13.87□□□□□ -0.19
SNCA-203ENST00000394986 CRYBA4P53673 196 aa13.87□□□□□ -0.19
SNCA-203ENST00000394986 SRSF3P84103 164 aaKnown RBP13.87□□□□□ -0.19
SNCA-203ENST00000394986 OCC1Q8TAD7 63 aa13.87□□□□□ -0.19
SNCA-203ENST00000394986 PTH2Q96A98 100 aa13.87□□□□□ -0.19
SNCA-203ENST00000394986 DAZAP1Q96EP5 407 aaKnown RBP13.87□□□□□ -0.19
SNCA-203ENST00000394986 JPT2Q9H910 190 aa13.87□□□□□ -0.19
SNCA-203ENST00000394986 SCRT2Q9NQ03 307 aa13.87□□□□□ -0.19
SNCA-203ENST00000394986 PRO0255Q9UI72 69 aa13.87□□□□□ -0.19
SNCA-203ENST00000394986 C9JQL5 133 aa13.86□□□□□ -0.19
SNCA-203ENST00000394986 GZMBP10144 247 aa13.86□□□□□ -0.19
SNCA-203ENST00000394986 DMRTA1Q5VZB9 504 aa13.86□□□□□ -0.19
SNCA-203ENST00000394986 UBE2DNLQ8IWF7 75 aa13.86□□□□□ -0.19
SNCA-203ENST00000394986 HHLA3Q9XRX5 114 aa13.86□□□□□ -0.19
SNCA-203ENST00000394986 PHLDA3Q9Y5J5 127 aa13.86□□□□□ -0.19
SNCA-203ENST00000394986 M0R381 172 aa13.85□□□□□ -0.19
SNCA-203ENST00000394986 OR2D3Q8NGH3 330 aa13.85□□□□□ -0.19
SNCA-203ENST00000394986 SMIM7Q9BQ49 75 aa13.85□□□□□ -0.19
SNCA-203ENST00000394986 MUC21A0A0G2JKD1 596 aa13.84□□□□□ -0.19
SNCA-203ENST00000394986 MUC21A0A140T8X8 626 aa13.84□□□□□ -0.19
SNCA-203ENST00000394986 H3BNG1 76 aa13.84□□□□□ -0.19
SNCA-203ENST00000394986 CXCL1P09341 107 aa13.84□□□□□ -0.19
SNCA-203ENST00000394986 A0A096LPF7 62 aa13.83□□□□□ -0.2
SNCA-203ENST00000394986 P01737 135 aa13.83□□□□□ -0.2
SNCA-203ENST00000394986 IFITM2Q01629 132 aa13.83□□□□□ -0.2
SNCA-203ENST00000394986 NUDT10Q8NFP7 164 aa13.83□□□□□ -0.2
SNCA-203ENST00000394986 OR10AG1Q8NH19 301 aa13.83□□□□□ -0.2
SNCA-203ENST00000394986 NUDT11Q96G61 164 aa13.83□□□□□ -0.2
SNCA-203ENST00000394986 SAMD10Q9BYL1 202 aa13.83□□□□□ -0.2
SNCA-203ENST00000394986 RNASE7Q9H1E1 156 aaKnown RBP13.83□□□□□ -0.2
SNCA-203ENST00000394986 BIN3Q9NQY0 253 aa13.83□□□□□ -0.2
SNCA-203ENST00000394986 NDUFS6O75380 124 aaKnown RBP13.82□□□□□ -0.2
SNCA-203ENST00000394986 MED14OSP0DP75 135 aa13.82□□□□□ -0.2
SNCA-203ENST00000394986 SLAQ13239 276 aa13.82□□□□□ -0.2
SNCA-203ENST00000394986 SYT8Q8NBV8 401 aa13.82□□□□□ -0.2
SNCA-203ENST00000394986 KMT2AQ03164 3969 aa13.82□□□□□ -0.2
SNCA-203ENST00000394986 ZNF727A8MUV8 499 aa13.81□□□□□ -0.2
SNCA-203ENST00000394986 GATA1P15976 413 aaPredicted RBP13.81□□□□□ -0.2
SNCA-203ENST00000394986 SSTP61278 116 aa13.81□□□□□ -0.2
SNCA-203ENST00000394986 PIK3CD-AS1Q5SR53 167 aa13.81□□□□□ -0.2
SNCA-203ENST00000394986 ICOSQ9Y6W8 199 aa13.81□□□□□ -0.2
SNCA-203ENST00000394986 LOC100131303A0A0U1RQF7 123 aa13.81□□□□□ -0.2
SNCA-203ENST00000394986 A8MWV9 139 aa13.81□□□□□ -0.2
SNCA-203ENST00000394986 SNAI2O43623 268 aa13.81□□□□□ -0.2
SNCA-203ENST00000394986 RAB14P61106 215 aa13.81□□□□□ -0.2
SNCA-203ENST00000394986 ZFP82Q8N141 532 aa13.81□□□□□ -0.2
SNCA-203ENST00000394986 TPPP3Q9BW30 176 aa13.81□□□□□ -0.2
SNCA-203ENST00000394986 A0A087WWL8 130 aa13.8□□□□□ -0.2
SNCA-203ENST00000394986 GYPEP15421 78 aa13.8□□□□□ -0.2
SNCA-203ENST00000394986 PEA15Q15121 130 aa13.8□□□□□ -0.2
SNCA-203ENST00000394986 RNF212Q495C1 297 aa13.8□□□□□ -0.2
SNCA-203ENST00000394986 SLC25A29Q8N8R3 303 aa13.8□□□□□ -0.2
SNCA-203ENST00000394986 SSBP4Q9BWG4 385 aaPredicted RBP13.8□□□□□ -0.2
SNCA-203ENST00000394986 LINC00588Q9Y4M8 146 aa13.8□□□□□ -0.2
SNCA-203ENST00000394986 NXPH4O95158 308 aa13.79□□□□□ -0.2
SNCA-203ENST00000394986 OR5AL1P0C617 328 aa13.79□□□□□ -0.2
SNCA-203ENST00000394986 IGLC6P0CF74 106 aa13.79□□□□□ -0.2
SNCA-203ENST00000394986 RPS20P60866 119 aaKnown RBP13.79□□□□□ -0.2
SNCA-203ENST00000394986 ESRGQ1W209 222 aa13.79□□□□□ -0.2
SNCA-203ENST00000394986 FAM74A4Q5TZK3 123 aa13.79□□□□□ -0.2
SNCA-203ENST00000394986 UFSP1Q6NVU6 142 aa13.79□□□□□ -0.2
SNCA-203ENST00000394986 Q6ZSN1 163 aa13.79□□□□□ -0.2
SNCA-203ENST00000394986 LINC01551Q86U37 167 aa13.79□□□□□ -0.2
SNCA-203ENST00000394986 SFRP2Q96HF1 295 aa13.79□□□□□ -0.2
SNCA-203ENST00000394986 RPP21Q9H633 154 aaKnown RBP13.79□□□□□ -0.2
SNCA-203ENST00000394986 NACAE9PAV3 2078 aa13.78□□□□□ -0.2
SNCA-203ENST00000394986 K7EQD1 137 aa13.78□□□□□ -0.2
SNCA-203ENST00000394986 CCL18P55774 89 aa13.78□□□□□ -0.2
SNCA-203ENST00000394986 FER1L6-AS1Q8NA97 138 aa13.78□□□□□ -0.2
SNCA-203ENST00000394986 LY96Q9Y6Y9 160 aa13.78□□□□□ -0.2
SNCA-203ENST00000394986 IGLV2-18A0A075B6J9 118 aa13.77□□□□□ -0.21
SNCA-203ENST00000394986 SPANXN1Q5VSR9 72 aa13.77□□□□□ -0.21
SNCA-203ENST00000394986 ZFP2Q6ZN57 461 aa13.77□□□□□ -0.21
SNCA-203ENST00000394986 DNAH6Q9C0G6 4158 aa13.76□□□□□ -0.21
SNCA-203ENST00000394986 XKRY2A2RUG3 117 aa13.76□□□□□ -0.21
SNCA-203ENST00000394986 CIDEAO60543 219 aa13.76□□□□□ -0.21
SNCA-203ENST00000394986 CRYGDP07320 174 aa13.76□□□□□ -0.21
SNCA-203ENST00000394986 MRPL23Q16540 153 aaKnown RBP13.76□□□□□ -0.21
SNCA-203ENST00000394986 CLLU1Q5K131 121 aa13.76□□□□□ -0.21
SNCA-203ENST00000394986 SRIP30626 198 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms