RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 C18orf65Q6ZTR6 163 aa11.44□□□□□ -0.58
CPSF7-202ENST00000394888 UFC1Q9Y3C8 167 aa11.44□□□□□ -0.58
CPSF7-202ENST00000394888 A0A0G2JLM5 398 aa11.44□□□□□ -0.58
CPSF7-202ENST00000394888 DSCR9P59020 149 aa11.44□□□□□ -0.58
CPSF7-202ENST00000394888 Q6YL49 198 aa11.44□□□□□ -0.58
CPSF7-202ENST00000394888 C14orf178Q8N769 122 aaPredicted RBP11.44□□□□□ -0.58
CPSF7-202ENST00000394888 LRRK2Q5S007 2527 aa11.43□□□□□ -0.58
CPSF7-202ENST00000394888 TSHBP01222 138 aa11.43□□□□□ -0.58
CPSF7-202ENST00000394888 SPANXN1Q5VSR9 72 aa11.43□□□□□ -0.58
CPSF7-202ENST00000394888 MAPKAPK5-AS1Q8N8E1 139 aa11.43□□□□□ -0.58
CPSF7-202ENST00000394888 ITPR3Q14573 2671 aa11.43□□□□□ -0.58
CPSF7-202ENST00000394888 ZNF843Q8N446 348 aa11.43□□□□□ -0.58
CPSF7-202ENST00000394888 K7EP13 123 aa11.42□□□□□ -0.58
CPSF7-202ENST00000394888 M0R381 172 aa11.42□□□□□ -0.58
CPSF7-202ENST00000394888 SIVA1O15304 175 aa11.42□□□□□ -0.58
CPSF7-202ENST00000394888 RBMY1A1P0DJD3 496 aaKnown RBP11.42□□□□□ -0.58
CPSF7-202ENST00000394888 RBMY1CP0DJD4 496 aa11.42□□□□□ -0.58
CPSF7-202ENST00000394888 RBMY1FQ15415 496 aaKnown RBP11.42□□□□□ -0.58
CPSF7-202ENST00000394888 AMTNQ6UX39 209 aa11.42□□□□□ -0.58
CPSF7-202ENST00000394888 WFDC12Q8WWY7 111 aa11.42□□□□□ -0.58
CPSF7-202ENST00000394888 TOMM6Q96B49 74 aa11.42□□□□□ -0.58
CPSF7-202ENST00000394888 K7EQG2 157 aa11.42□□□□□ -0.58
CPSF7-202ENST00000394888 TMEM97Q5BJF2 176 aa11.42□□□□□ -0.58
CPSF7-202ENST00000394888 C12orf54Q6X4T0 127 aa11.42□□□□□ -0.58
CPSF7-202ENST00000394888 MRPL35Q9NZE8 188 aaKnown RBP11.42□□□□□ -0.58
CPSF7-202ENST00000394888 TMEM89A2RUT3 159 aa11.42□□□□□ -0.58
CPSF7-202ENST00000394888 IGHV4OR15-8A0A075B7B6 117 aa11.41□□□□□ -0.58
CPSF7-202ENST00000394888 A0A087WW49 117 aa11.41□□□□□ -0.58
CPSF7-202ENST00000394888 CRYGDP07320 174 aa11.41□□□□□ -0.58
CPSF7-202ENST00000394888 C9orf85Q96MD7 179 aa11.41□□□□□ -0.58
CPSF7-202ENST00000394888 NEXN-AS1Q8NBZ9 246 aa11.41□□□□□ -0.58
CPSF7-202ENST00000394888 RNASE8Q8TDE3 154 aaKnown RBP11.41□□□□□ -0.58
CPSF7-202ENST00000394888 DOPEY2Q9Y3R5 2298 aa11.41□□□□□ -0.58
CPSF7-202ENST00000394888 FOXC2Q99958 501 aa11.41□□□□□ -0.58
CPSF7-202ENST00000394888 ABCA12Q86UK0 2595 aa11.41□□□□□ -0.58
CPSF7-202ENST00000394888 A0A0J9YX75 114 aa11.4□□□□□ -0.58
CPSF7-202ENST00000394888 SUMO2P61956 95 aaKnown RBP11.4□□□□□ -0.58
CPSF7-202ENST00000394888 PHLDA1Q8WV24 401 aaPredicted RBP11.4□□□□□ -0.58
CPSF7-202ENST00000394888 DPH3P1Q9H4G8 78 aa11.4□□□□□ -0.58
CPSF7-202ENST00000394888 CHD6Q8TD26 2715 aa11.4□□□□□ -0.58
CPSF7-202ENST00000394888 A0A087WX48 190 aa11.4□□□□□ -0.58
CPSF7-202ENST00000394888 ASIPP42127 132 aa11.4□□□□□ -0.58
CPSF7-202ENST00000394888 UFSP1Q6NVU6 142 aa11.4□□□□□ -0.58
CPSF7-202ENST00000394888 Q8N2B8 174 aa11.4□□□□□ -0.58
CPSF7-202ENST00000394888 J3QLI3 93 aa11.4□□□□□ -0.58
CPSF7-202ENST00000394888 TCTEX1D4Q5JR98 221 aa11.4□□□□□ -0.58
CPSF7-202ENST00000394888 VPREB3Q9UKI3 123 aa11.4□□□□□ -0.58
CPSF7-202ENST00000394888 IGKCP01834 107 aa11.39□□□□□ -0.59
CPSF7-202ENST00000394888 HLA-DRB4P13762 266 aa11.39□□□□□ -0.59
CPSF7-202ENST00000394888 C20orf78Q9BR46 151 aa11.39□□□□□ -0.59
CPSF7-202ENST00000394888 HLA-DRB4X5D2U9 266 aa11.39□□□□□ -0.59
CPSF7-202ENST00000394888 IGHV3-16A0A0C4DH30 117 aa11.39□□□□□ -0.59
CPSF7-202ENST00000394888 LGALS9O00182 355 aa11.39□□□□□ -0.59
CPSF7-202ENST00000394888 ODF3Q96PU9 254 aa11.39□□□□□ -0.59
CPSF7-202ENST00000394888 GTSCR1Q86UQ5 136 aa11.38□□□□□ -0.59
CPSF7-202ENST00000394888 OR9G4Q8NGQ1 327 aa11.38□□□□□ -0.59
CPSF7-202ENST00000394888 POLR2KP53803 58 aaKnown RBP11.38□□□□□ -0.59
CPSF7-202ENST00000394888 MDFICQ9P1T7 246 aa11.38□□□□□ -0.59
CPSF7-202ENST00000394888 TRAV12-1A0A0B4J245 112 aa11.38□□□□□ -0.59
CPSF7-202ENST00000394888 A8MTW9 85 aa11.38□□□□□ -0.59
CPSF7-202ENST00000394888 NEGR1Q7Z3B1 354 aa11.38□□□□□ -0.59
CPSF7-202ENST00000394888 RPL11P62913 178 aaKnown RBP11.37□□□□□ -0.59
CPSF7-202ENST00000394888 HIST2H2BDQ6DRA6 164 aa11.37□□□□□ -0.59
CPSF7-202ENST00000394888 HIGD1BQ9P298 99 aa11.37□□□□□ -0.59
CPSF7-202ENST00000394888 LGALS1P09382 135 aaKnown RBP11.37□□□□□ -0.59
CPSF7-202ENST00000394888 NMUP48645 174 aa11.37□□□□□ -0.59
CPSF7-202ENST00000394888 RBX1P62877 108 aa11.37□□□□□ -0.59
CPSF7-202ENST00000394888 AMMECR1LQ6DCA0 310 aa11.37□□□□□ -0.59
CPSF7-202ENST00000394888 PTPN13Q12923 2485 aa11.37□□□□□ -0.59
CPSF7-202ENST00000394888 ATP5LO75964 103 aa11.37□□□□□ -0.59
CPSF7-202ENST00000394888 TGFAP01135 160 aa11.37□□□□□ -0.59
CPSF7-202ENST00000394888 ZC2HC1BQ5TFG8 222 aa11.37□□□□□ -0.59
CPSF7-202ENST00000394888 BAALCQ8WXS3 180 aa11.37□□□□□ -0.59
CPSF7-202ENST00000394888 SETXQ7Z333 2677 aaKnown RBP11.36□□□□□ -0.59
CPSF7-202ENST00000394888 TRAV12-2A0A075B6T6 113 aa11.36□□□□□ -0.59
CPSF7-202ENST00000394888 C7orf71A4D174 169 aa11.36□□□□□ -0.59
CPSF7-202ENST00000394888 RBMY1BA6NDE4 496 aaKnown RBP11.36□□□□□ -0.59
CPSF7-202ENST00000394888 RBMY1EA6NEQ0 496 aaKnown RBP11.36□□□□□ -0.59
CPSF7-202ENST00000394888 RBMY1DP0C7P1 496 aaKnown RBP11.36□□□□□ -0.59
CPSF7-202ENST00000394888 SEC11AP67812 179 aa11.36□□□□□ -0.59
CPSF7-202ENST00000394888 SUMO4Q6EEV6 95 aa11.36□□□□□ -0.59
CPSF7-202ENST00000394888 TRBV25-1A0A075B6N4 114 aa11.36□□□□□ -0.59
CPSF7-202ENST00000394888 TRAV12-3A0A0B4J271 114 aa11.36□□□□□ -0.59
CPSF7-202ENST00000394888 DPM2O94777 84 aa11.36□□□□□ -0.59
CPSF7-202ENST00000394888 ZNF688P0C7X2 276 aa11.36□□□□□ -0.59
CPSF7-202ENST00000394888 FXYD2P54710 66 aa11.36□□□□□ -0.59
CPSF7-202ENST00000394888 RPL32P62910 135 aaKnown RBP11.36□□□□□ -0.59
CPSF7-202ENST00000394888 FAM104AQ969W3 186 aa11.36□□□□□ -0.59
CPSF7-202ENST00000394888 HOXA3O43365 443 aaPredicted RBP11.36□□□□□ -0.59
CPSF7-202ENST00000394888 SYNJ2BPP57105 145 aa11.36□□□□□ -0.59
CPSF7-202ENST00000394888 HSD52Q0P140 79 aa11.36□□□□□ -0.59
CPSF7-202ENST00000394888 PHLDA3Q9Y5J5 127 aa11.36□□□□□ -0.59
CPSF7-202ENST00000394888 IGLV4-69A0A075B6H9 119 aa11.35□□□□□ -0.59
CPSF7-202ENST00000394888 A1L4Q6 167 aa11.35□□□□□ -0.59
CPSF7-202ENST00000394888 IGIPA6NJ69 53 aa11.35□□□□□ -0.59
CPSF7-202ENST00000394888 DUX5Q96PT3 197 aa11.35□□□□□ -0.59
CPSF7-202ENST00000394888 HOXD3P31249 432 aaPredicted RBP11.35□□□□□ -0.59
CPSF7-202ENST00000394888 PSMG4Q5JS54 123 aa11.34□□□□□ -0.59
CPSF7-202ENST00000394888 BEX4Q9NWD9 120 aaPredicted RBP11.34□□□□□ -0.59
CPSF7-202ENST00000394888 PRSS1P07477 247 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms