RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 AGRNO00468 2067 aa4.44□□□□□ -1.7
RFFL-202ENST00000394597 IGKV2-40A0A087WW87 121 aaPredicted RBP4.44□□□□□ -1.7
RFFL-202ENST00000394597 PRSS46E5RG02 174 aa4.44□□□□□ -1.7
RFFL-202ENST00000394597 IGKV2D-40P01614 121 aaPredicted RBP4.44□□□□□ -1.7
RFFL-202ENST00000394597 BRWD1-AS2P59051 145 aa4.44□□□□□ -1.7
RFFL-202ENST00000394597 LMO4P61968 165 aa4.44□□□□□ -1.7
RFFL-202ENST00000394597 NPBQ8NG41 125 aa4.44□□□□□ -1.7
RFFL-202ENST00000394597 FAM223BA6NKX1 122 aa4.44□□□□□ -1.7
RFFL-202ENST00000394597 CRYGCP07315 174 aa4.44□□□□□ -1.7
RFFL-202ENST00000394597 P0C879 139 aa4.44□□□□□ -1.7
RFFL-202ENST00000394597 EIF4EBP1Q13541 118 aaPredicted RBP4.44□□□□□ -1.7
RFFL-202ENST00000394597 CIRBPQ14011 172 aaKnown RBP4.44□□□□□ -1.7
RFFL-202ENST00000394597 UTF1Q5T230 341 aa4.44□□□□□ -1.7
RFFL-202ENST00000394597 FAM223AQ8IWN6 122 aa4.44□□□□□ -1.7
RFFL-202ENST00000394597 Q8TAT8 98 aa4.44□□□□□ -1.7
RFFL-202ENST00000394597 CHCHD5Q9BSY4 110 aa4.44□□□□□ -1.7
RFFL-202ENST00000394597 IGKV2D-26A0A0A0MRZ7 120 aa4.44□□□□□ -1.7
RFFL-202ENST00000394597 ZFP2Q6ZN57 461 aa4.44□□□□□ -1.7
RFFL-202ENST00000394597 Q8N8P6 123 aa4.44□□□□□ -1.7
RFFL-202ENST00000394597 SIRPDQ9H106 197 aa4.44□□□□□ -1.7
RFFL-202ENST00000394597 DSCAMO60469 2012 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 HCFC1P51610 2035 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 A0A087WX48 190 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 TMEM190Q8WZ59 177 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 SLC50A1Q9BRV3 221 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 TLN2Q9Y4G6 2542 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 TRAV4A0A0B4J268 109 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 G3V318 75 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 PPP1R17O96001 155 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 IGLV2-23P01705 113 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 SNRPD3P62318 126 aaKnown RBP4.43□□□□□ -1.7
RFFL-202ENST00000394597 THAP8Q8NA92 274 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 DEFB104AQ8WTQ1 72 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 URB1-AS1Q96HZ7 61 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 C8orf49Q96NF6 230 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 COL6A3P12111 3177 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 SETD2Q9BYW2 2564 aaPredicted RBP4.43□□□□□ -1.7
RFFL-202ENST00000394597 RHODO00212 210 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 TNFRSF13BO14836 293 aaPredicted RBP4.43□□□□□ -1.7
RFFL-202ENST00000394597 NPC2P61916 151 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 C1orf229Q6ZS94 237 aaPredicted RBP4.43□□□□□ -1.7
RFFL-202ENST00000394597 ZNF503Q96F45 646 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 DUX5Q96PT3 197 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 SPANXDQ9BXN6 97 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 SPANXCQ9NY87 97 aa4.43□□□□□ -1.7
RFFL-202ENST00000394597 INS-IGF2F8WCM5 200 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 LGALS1P09382 135 aaKnown RBP4.42□□□□□ -1.7
RFFL-202ENST00000394597 CFC1BP0CG36 223 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 CFC1P0CG37 223 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 FAM74A4Q5TZK3 123 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 CFAP126Q5VTH2 177 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 IGFBPL1Q8WX77 278 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 FAM167A-AS1Q96KT0 104 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 TRIOO75962 3097 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 TCL1BO95988 128 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 CD7P09564 240 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 HIST1H4AP62805 103 aaKnown RBP4.42□□□□□ -1.7
RFFL-202ENST00000394597 LINC00322Q6ZN03 302 aaPredicted RBP4.42□□□□□ -1.7
RFFL-202ENST00000394597 SHANK2-AS3Q9BTD1 123 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 IGHV3OR16-12A0A075B7B8 117 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 IGKV1OR2-108A0A075B7D4 117 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 IGHV4-38-2P0DP08 117 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 IL17RELQ6ZVW7 336 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 TMEM75Q8N9X5 138 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 CARD19Q96LW7 228 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 PEMTQ9UBM1 199 aa4.42□□□□□ -1.7
RFFL-202ENST00000394597 DEFB112Q30KQ8 113 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 C2orf66Q6UXQ4 117 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 LYPD1Q8N2G4 141 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 PIP4P2Q8N4L2 257 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 RNF182Q8N6D2 247 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 ODF3BA8MYP8 253 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 LINC01620Q4KN68 170 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 SIGLEC15Q6ZMC9 328 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 PPDPFQ9H3Y8 114 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 IGHV7-81A0A0B4J1V7 117 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 OVOL3O00110 214 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 GATA1P15976 413 aaPredicted RBP4.41□□□□□ -1.7
RFFL-202ENST00000394597 TRPT1Q86TN4 253 aaKnown RBP4.41□□□□□ -1.7
RFFL-202ENST00000394597 Q8N1Y9 231 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 Q8N9W7 124 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 KLHL30-AS1Q8NEE0 82 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 TNFRSF18Q9Y5U5 241 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 TRGV11A0A075B6L2 103 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 C19orf71A6NCJ1 209 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 SMIM9A6NGZ8 99 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 E7EUB6 86 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 RS1O15537 224 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 DUX3Q96PT4 197 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 VPREB3Q9UKI3 123 aa4.41□□□□□ -1.7
RFFL-202ENST00000394597 TRAV26-2A0A0B4J265 109 aa4.4□□□□□ -1.7
RFFL-202ENST00000394597 IGHG4P01861 327 aa4.4□□□□□ -1.7
RFFL-202ENST00000394597 SRD5A1P18405 259 aa4.4□□□□□ -1.7
RFFL-202ENST00000394597 HERVK_113P63121 156 aa4.4□□□□□ -1.7
RFFL-202ENST00000394597 PATE2Q6UY27 113 aa4.4□□□□□ -1.7
RFFL-202ENST00000394597 LRRC75A-AS1Q8N1F1 130 aa4.4□□□□□ -1.7
RFFL-202ENST00000394597 GATD1Q8NB37 220 aa4.4□□□□□ -1.7
RFFL-202ENST00000394597 A0A0U1RRA0 63 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 A0A1W2PRX2 142 aa4.4□□□□□ -1.71
RFFL-202ENST00000394597 LINC00694P0DN24 101 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms