RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 C20orf78Q9BR46 151 aa12.34□□□□□ -0.43
PDZD4-202ENST00000393758 TNRC18O15417 2968 aaPredicted RBP12.34□□□□□ -0.43
PDZD4-202ENST00000393758 SPINK8P0C7L1 97 aa12.33□□□□□ -0.43
PDZD4-202ENST00000393758 GATD1Q8NB37 220 aa12.33□□□□□ -0.44
PDZD4-202ENST00000393758 MSRB2Q9Y3D2 182 aa12.33□□□□□ -0.44
PDZD4-202ENST00000393758 C9orf139Q6ZV77 190 aa12.33□□□□□ -0.44
PDZD4-202ENST00000393758 TLN2Q9Y4G6 2542 aa12.33□□□□□ -0.44
PDZD4-202ENST00000393758 MRAP2Q96G30 205 aa12.32□□□□□ -0.44
PDZD4-202ENST00000393758 NPC2P61916 151 aa12.32□□□□□ -0.44
PDZD4-202ENST00000393758 JPT2Q9H910 190 aa12.32□□□□□ -0.44
PDZD4-202ENST00000393758 TRBV7-1A0A0A6YYK4 115 aa12.32□□□□□ -0.44
PDZD4-202ENST00000393758 IGHV3-73A0A0B4J1V6 119 aa12.32□□□□□ -0.44
PDZD4-202ENST00000393758 E9PLD3 99 aa12.32□□□□□ -0.44
PDZD4-202ENST00000393758 IGHV4-39P01824 125 aa12.32□□□□□ -0.44
PDZD4-202ENST00000393758 ZNF688P0C7X2 276 aa12.32□□□□□ -0.44
PDZD4-202ENST00000393758 RPL39P62891 51 aaKnown RBP12.32□□□□□ -0.44
PDZD4-202ENST00000393758 CCDC140Q96MF4 163 aa12.32□□□□□ -0.44
PDZD4-202ENST00000393758 IGHG4P01861 327 aa12.31□□□□□ -0.44
PDZD4-202ENST00000393758 KHDC1LQ5JSQ8 128 aa12.31□□□□□ -0.44
PDZD4-202ENST00000393758 LINC00477Q96M19 166 aa12.31□□□□□ -0.44
PDZD4-202ENST00000393758 OOSP1A8MZH6 123 aa12.31□□□□□ -0.44
PDZD4-202ENST00000393758 OVOL3O00110 214 aa12.31□□□□□ -0.44
PDZD4-202ENST00000393758 NPFFO15130 113 aa12.31□□□□□ -0.44
PDZD4-202ENST00000393758 TRBV12-3P01733 135 aa12.31□□□□□ -0.44
PDZD4-202ENST00000393758 TM2D2Q9BX73 214 aa12.31□□□□□ -0.44
PDZD4-202ENST00000393758 SPANXB1Q9NS25 103 aaPredicted RBP12.31□□□□□ -0.44
PDZD4-202ENST00000393758 UNQ9165/PRO28630Q6UXU0 137 aa12.3□□□□□ -0.44
PDZD4-202ENST00000393758 RHPN1-AS1Q9BWJ2 59 aa12.3□□□□□ -0.44
PDZD4-202ENST00000393758 ZZEF1O43149 2961 aa12.3□□□□□ -0.44
PDZD4-202ENST00000393758 TRAV8-2A0A0B4J237 113 aa12.3□□□□□ -0.44
PDZD4-202ENST00000393758 LGALS1P09382 135 aaKnown RBP12.3□□□□□ -0.44
PDZD4-202ENST00000393758 PRR9Q5T870 116 aa12.3□□□□□ -0.44
PDZD4-202ENST00000393758 ZFP2Q6ZN57 461 aa12.3□□□□□ -0.44
PDZD4-202ENST00000393758 LY6G5BQ8NDX9 201 aa12.3□□□□□ -0.44
PDZD4-202ENST00000393758 PLEKHB2Q96CS7 222 aa12.3□□□□□ -0.44
PDZD4-202ENST00000393758 A8MWV9 139 aa12.3□□□□□ -0.44
PDZD4-202ENST00000393758 TRAV12-2A0A075B6T6 113 aa12.29□□□□□ -0.44
PDZD4-202ENST00000393758 ATP6V0BQ99437 205 aa12.29□□□□□ -0.44
PDZD4-202ENST00000393758 USP9XQ93008 2570 aaPredicted RBP12.29□□□□□ -0.44
PDZD4-202ENST00000393758 OVOL1O14753 267 aa12.29□□□□□ -0.44
PDZD4-202ENST00000393758 CDSNQ15517 529 aa12.29□□□□□ -0.44
PDZD4-202ENST00000393758 NRACQ8N912 160 aa12.29□□□□□ -0.44
PDZD4-202ENST00000393758 TAL2Q16559 108 aa12.29□□□□□ -0.44
PDZD4-202ENST00000393758 C1orf122Q6ZSJ8 110 aa12.29□□□□□ -0.44
PDZD4-202ENST00000393758 BAALCQ8WXS3 180 aa12.29□□□□□ -0.44
PDZD4-202ENST00000393758 ID1P41134 155 aa12.28□□□□□ -0.44
PDZD4-202ENST00000393758 UBE2E1P51965 193 aa12.28□□□□□ -0.44
PDZD4-202ENST00000393758 ZFAND3Q9H8U3 227 aa12.28□□□□□ -0.44
PDZD4-202ENST00000393758 ADARB2-AS1A8MUL3 147 aa12.28□□□□□ -0.44
PDZD4-202ENST00000393758 RBAKDNA6NC62 111 aa12.27□□□□□ -0.44
PDZD4-202ENST00000393758 SDHAF1A6NFY7 115 aa12.27□□□□□ -0.44
PDZD4-202ENST00000393758 ODF3BA8MYP8 253 aa12.27□□□□□ -0.44
PDZD4-202ENST00000393758 C9JAW5 83 aa12.27□□□□□ -0.44
PDZD4-202ENST00000393758 RASL10AQ92737 203 aa12.27□□□□□ -0.44
PDZD4-202ENST00000393758 IGHV7-4-1A0A0J9YVY3 117 aa12.27□□□□□ -0.45
PDZD4-202ENST00000393758 H3BUX3 64 aa12.27□□□□□ -0.45
PDZD4-202ENST00000393758 ZNF292O60281 2723 aa12.27□□□□□ -0.45
PDZD4-202ENST00000393758 PPP1R17O96001 155 aa12.27□□□□□ -0.45
PDZD4-202ENST00000393758 C20orf173Q96LM9 149 aa12.27□□□□□ -0.45
PDZD4-202ENST00000393758 ZNF48Q96MX3 618 aaPredicted RBP12.27□□□□□ -0.45
PDZD4-202ENST00000393758 MOB4Q9Y3A3 225 aa12.27□□□□□ -0.45
PDZD4-202ENST00000393758 C11orf86A6NJI1 115 aa12.26□□□□□ -0.45
PDZD4-202ENST00000393758 DUX5Q96PT3 197 aa12.26□□□□□ -0.45
PDZD4-202ENST00000393758 GEMIN7Q9H840 131 aaKnown RBP12.26□□□□□ -0.45
PDZD4-202ENST00000393758 KLK9Q9UKQ9 250 aa12.26□□□□□ -0.45
PDZD4-202ENST00000393758 A0A0U1RRA0 63 aa12.26□□□□□ -0.45
PDZD4-202ENST00000393758 CENPVL3A0A0U1RRI6 287 aa12.26□□□□□ -0.45
PDZD4-202ENST00000393758 OPRPNQ99935 248 aaPredicted RBP12.26□□□□□ -0.45
PDZD4-202ENST00000393758 VCYO14598 125 aa12.25□□□□□ -0.45
PDZD4-202ENST00000393758 LY6DQ14210 128 aa12.25□□□□□ -0.45
PDZD4-202ENST00000393758 SPXQ9BT56 116 aa12.25□□□□□ -0.45
PDZD4-202ENST00000393758 VCX2Q9H322 139 aa12.25□□□□□ -0.45
PDZD4-202ENST00000393758 PMVKQ15126 192 aa12.24□□□□□ -0.45
PDZD4-202ENST00000393758 RNASE13Q5GAN3 156 aaKnown RBP12.24□□□□□ -0.45
PDZD4-202ENST00000393758 C9orf47Q6ZRZ4 202 aa12.24□□□□□ -0.45
PDZD4-202ENST00000393758 COL27A1Q8IZC6 1860 aaPredicted RBP12.24□□□□□ -0.45
PDZD4-202ENST00000393758 ZNF876PQ49A33 203 aa12.24□□□□□ -0.45
PDZD4-202ENST00000393758 PAPPA-AS1Q5QFB9 102 aa12.23□□□□□ -0.45
PDZD4-202ENST00000393758 DGAT2L7PQ6IED9 249 aa12.23□□□□□ -0.45
PDZD4-202ENST00000393758 TOMM6Q96B49 74 aa12.23□□□□□ -0.45
PDZD4-202ENST00000393758 CLPSL1A2RUU4 121 aa12.23□□□□□ -0.45
PDZD4-202ENST00000393758 IGF2-ASQ6U949 168 aa12.23□□□□□ -0.45
PDZD4-202ENST00000393758 CNFNQ9BYD5 112 aa12.23□□□□□ -0.45
PDZD4-202ENST00000393758 ZMAT4Q9H898 229 aa12.23□□□□□ -0.45
PDZD4-202ENST00000393758 ERG28Q9UKR5 140 aa12.23□□□□□ -0.45
PDZD4-202ENST00000393758 K7ENP7 123 aa12.23□□□□□ -0.45
PDZD4-202ENST00000393758 FOXI1Q12951 378 aa12.23□□□□□ -0.45
PDZD4-202ENST00000393758 KLRB1Q12918 225 aa12.22□□□□□ -0.45
PDZD4-202ENST00000393758 ANAPC13Q9BS18 74 aa12.22□□□□□ -0.45
PDZD4-202ENST00000393758 SONP18583 2426 aaKnown RBP12.22□□□□□ -0.45
PDZD4-202ENST00000393758 KNCNA6PVL3 124 aa12.22□□□□□ -0.45
PDZD4-202ENST00000393758 SPINK13Q1W4C9 94 aa12.22□□□□□ -0.45
PDZD4-202ENST00000393758 POLQO75417 2590 aa12.21□□□□□ -0.45
PDZD4-202ENST00000393758 CSMD1Q96PZ7 3565 aa12.21□□□□□ -0.45
PDZD4-202ENST00000393758 BLCAPP62952 87 aa12.21□□□□□ -0.45
PDZD4-202ENST00000393758 IGLV2-18A0A075B6J9 118 aa12.21□□□□□ -0.45
PDZD4-202ENST00000393758 J3QQQ9 107 aa12.21□□□□□ -0.45
PDZD4-202ENST00000393758 TSPAN13O95857 204 aa12.21□□□□□ -0.45
PDZD4-202ENST00000393758 TMEM95Q3KNT9 176 aa12.21□□□□□ -0.45
PDZD4-202ENST00000393758 NEXN-AS1Q8NBZ9 246 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms