RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 SRSF1Q07955 248 aaKnown RBP eCLIP8.33□□□□□ -1.08
BRF1-204ENST00000392557 WFDC2Q14508 124 aa8.33□□□□□ -1.08
BRF1-204ENST00000392557 CEND1Q8N111 149 aa8.33□□□□□ -1.08
BRF1-204ENST00000392557 Q8N8P6 123 aa8.33□□□□□ -1.08
BRF1-204ENST00000392557 PHLDA3Q9Y5J5 127 aa8.33□□□□□ -1.08
BRF1-204ENST00000392557 IGKV3D-20A0A0C4DH25 116 aa8.33□□□□□ -1.08
BRF1-204ENST00000392557 IGHV4-38-2P0DP08 117 aa8.33□□□□□ -1.08
BRF1-204ENST00000392557 C14orf178Q8N769 122 aaPredicted RBP8.33□□□□□ -1.08
BRF1-204ENST00000392557 GATD1Q8NB37 220 aa8.33□□□□□ -1.08
BRF1-204ENST00000392557 TEX15Q9BXT5 2789 aa8.32□□□□□ -1.08
BRF1-204ENST00000392557 MAPKAPK5-AS1Q8N8E1 139 aa8.32□□□□□ -1.08
BRF1-204ENST00000392557 TGFAP01135 160 aa8.32□□□□□ -1.08
BRF1-204ENST00000392557 IGHV3-11P01762 117 aa8.32□□□□□ -1.08
BRF1-204ENST00000392557 Q8N6K4 173 aa8.32□□□□□ -1.08
BRF1-204ENST00000392557 BBC3Q96PG8 261 aaPredicted RBP8.32□□□□□ -1.08
BRF1-204ENST00000392557 HHLA3Q9XRX5 114 aa8.32□□□□□ -1.08
BRF1-204ENST00000392557 TSSC4Q9Y5U2 329 aaPredicted RBP8.32□□□□□ -1.08
BRF1-204ENST00000392557 A0A1B0GWB2 263 aa8.32□□□□□ -1.08
BRF1-204ENST00000392557 F5H697 171 aa8.32□□□□□ -1.08
BRF1-204ENST00000392557 BUB3O43684 328 aa8.32□□□□□ -1.08
BRF1-204ENST00000392557 C11orf21Q9P2W6 132 aa8.32□□□□□ -1.08
BRF1-204ENST00000392557 NEGR1Q7Z3B1 354 aa8.31□□□□□ -1.08
BRF1-204ENST00000392557 SLC50A1Q9BRV3 221 aa8.31□□□□□ -1.08
BRF1-204ENST00000392557 MRPL16Q9NX20 251 aaKnown RBP8.31□□□□□ -1.08
BRF1-204ENST00000392557 APOMO95445 188 aa8.31□□□□□ -1.08
BRF1-204ENST00000392557 IGHG4P01861 327 aa8.31□□□□□ -1.08
BRF1-204ENST00000392557 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.31□□□□□ -1.08
BRF1-204ENST00000392557 C8orf86Q6ZUL3 223 aa8.31□□□□□ -1.08
BRF1-204ENST00000392557 SMPXQ9UHP9 88 aa8.31□□□□□ -1.08
BRF1-204ENST00000392557 C10orf105Q8TEF2 133 aa8.31□□□□□ -1.08
BRF1-204ENST00000392557 EEF1AKMT3Q96AZ1 226 aa8.31□□□□□ -1.08
BRF1-204ENST00000392557 AJUBAQ96IF1 538 aa8.3□□□□□ -1.08
BRF1-204ENST00000392557 CITED2Q99967 270 aaPredicted RBP8.3□□□□□ -1.08
BRF1-204ENST00000392557 NIPBLQ6KC79 2804 aaeCLIP8.3□□□□□ -1.08
BRF1-204ENST00000392557 IGF1P05019 195 aa8.3□□□□□ -1.08
BRF1-204ENST00000392557 AZU1P20160 251 aa8.3□□□□□ -1.08
BRF1-204ENST00000392557 RNASE4P34096 147 aaKnown RBP8.3□□□□□ -1.08
BRF1-204ENST00000392557 RAB9AP51151 201 aa8.3□□□□□ -1.08
BRF1-204ENST00000392557 C12orf74Q32Q52 190 aa8.3□□□□□ -1.08
BRF1-204ENST00000392557 CD300EQ496F6 205 aaPredicted RBP8.3□□□□□ -1.08
BRF1-204ENST00000392557 ZNF418Q8TF45 676 aaPredicted RBP8.3□□□□□ -1.08
BRF1-204ENST00000392557 SIGMAR1Q99720 223 aa8.3□□□□□ -1.08
BRF1-204ENST00000392557 IGHV1-69DA0A0B4J2H0 117 aa8.3□□□□□ -1.08
BRF1-204ENST00000392557 IGLL5B9A064 214 aa8.3□□□□□ -1.08
BRF1-204ENST00000392557 H3BUX3 64 aa8.3□□□□□ -1.08
BRF1-204ENST00000392557 IGHV1-69P01742 117 aa8.3□□□□□ -1.08
BRF1-204ENST00000392557 HERV-K104P63124 156 aa8.3□□□□□ -1.08
BRF1-204ENST00000392557 ATP5G2Q06055 141 aa8.3□□□□□ -1.08
BRF1-204ENST00000392557 EBI3Q14213 229 aa8.3□□□□□ -1.08
BRF1-204ENST00000392557 LINC01559Q495D7 138 aa8.3□□□□□ -1.08
BRF1-204ENST00000392557 GAGE13Q4V321 117 aa8.3□□□□□ -1.08
BRF1-204ENST00000392557 TMEM190Q8WZ59 177 aa8.3□□□□□ -1.08
BRF1-204ENST00000392557 OR10J6PQ8NGY7 276 aa8.29□□□□□ -1.08
BRF1-204ENST00000392557 ZNF815PA8K554 130 aa8.29□□□□□ -1.08
BRF1-204ENST00000392557 RPL39LQ96EH5 51 aaKnown RBP8.29□□□□□ -1.08
BRF1-204ENST00000392557 H7C1H1 209 aa8.28□□□□□ -1.08
BRF1-204ENST00000392557 PLNP26678 52 aa8.28□□□□□ -1.08
BRF1-204ENST00000392557 A0A087WX48 190 aa8.28□□□□□ -1.08
BRF1-204ENST00000392557 PAX8Q06710 450 aa8.28□□□□□ -1.08
BRF1-204ENST00000392557 DUX5Q96PT3 197 aa8.28□□□□□ -1.08
BRF1-204ENST00000392557 PGPEP1Q9NXJ5 209 aa8.28□□□□□ -1.08
BRF1-204ENST00000392557 F6UB75 175 aa8.28□□□□□ -1.08
BRF1-204ENST00000392557 SCGB1C2P0DMR2 95 aa8.28□□□□□ -1.08
BRF1-204ENST00000392557 COX6B1P14854 86 aa8.28□□□□□ -1.08
BRF1-204ENST00000392557 PSMB2P49721 201 aa8.28□□□□□ -1.08
BRF1-204ENST00000392557 FAM74A4Q5TZK3 123 aa8.28□□□□□ -1.08
BRF1-204ENST00000392557 FAM110DQ8TAY7 271 aaPredicted RBP8.28□□□□□ -1.08
BRF1-204ENST00000392557 CHD6Q8TD26 2715 aa8.28□□□□□ -1.08
BRF1-204ENST00000392557 HOXA3O43365 443 aaPredicted RBP8.27□□□□□ -1.08
BRF1-204ENST00000392557 IGKV3-20P01619 116 aa8.27□□□□□ -1.08
BRF1-204ENST00000392557 MSMBP08118 114 aa8.27□□□□□ -1.08
BRF1-204ENST00000392557 CRYBA4P53673 196 aa8.27□□□□□ -1.08
BRF1-204ENST00000392557 PSMG4Q5JS54 123 aa8.27□□□□□ -1.08
BRF1-204ENST00000392557 C5orf56Q8N8D9 126 aa8.27□□□□□ -1.08
BRF1-204ENST00000392557 VCX2Q9H322 139 aa8.27□□□□□ -1.08
BRF1-204ENST00000392557 HIGD1BQ9P298 99 aa8.27□□□□□ -1.08
BRF1-204ENST00000392557 ASIPP42127 132 aa8.27□□□□□ -1.09
BRF1-204ENST00000392557 FOXI2Q6ZQN5 318 aa8.27□□□□□ -1.09
BRF1-204ENST00000392557 SMIM2Q9BVW6 85 aa8.27□□□□□ -1.09
BRF1-204ENST00000392557 MOB4Q9Y3A3 225 aa8.27□□□□□ -1.09
BRF1-204ENST00000392557 GAGE12HA6NDE8 117 aa8.27□□□□□ -1.09
BRF1-204ENST00000392557 F8VRH5 84 aa8.27□□□□□ -1.09
BRF1-204ENST00000392557 H7C2G1 150 aa8.27□□□□□ -1.09
BRF1-204ENST00000392557 SUMO2P61956 95 aaKnown RBP8.27□□□□□ -1.09
BRF1-204ENST00000392557 HECTD1Q9ULT8 2610 aa8.27□□□□□ -1.09
BRF1-204ENST00000392557 MXRA5Q9NR99 2828 aa8.27□□□□□ -1.09
BRF1-204ENST00000392557 TRAV41A0A0B4J266 112 aa8.26□□□□□ -1.09
BRF1-204ENST00000392557 BLCAPP62952 87 aa8.26□□□□□ -1.09
BRF1-204ENST00000392557 C2orf66Q6UXQ4 117 aa8.26□□□□□ -1.09
BRF1-204ENST00000392557 MYMXA0A1B0GTQ4 84 aa8.26□□□□□ -1.09
BRF1-204ENST00000392557 ORMDL2Q53FV1 153 aa8.26□□□□□ -1.09
BRF1-204ENST00000392557 TMEM170BQ5T4T1 132 aa8.26□□□□□ -1.09
BRF1-204ENST00000392557 KLHL30-AS1Q8NEE0 82 aa8.26□□□□□ -1.09
BRF1-204ENST00000392557 CCDC140Q96MF4 163 aa8.26□□□□□ -1.09
BRF1-204ENST00000392557 PRADC1Q9BSG0 188 aa8.26□□□□□ -1.09
BRF1-204ENST00000392557 TRAV26-1A0A087WT03 109 aa8.26□□□□□ -1.09
BRF1-204ENST00000392557 AVPP01185 164 aa8.26□□□□□ -1.09
BRF1-204ENST00000392557 SLC25A16P16260 332 aa8.26□□□□□ -1.09
BRF1-204ENST00000392557 ZFAND3Q9H8U3 227 aa8.26□□□□□ -1.09
BRF1-204ENST00000392557 LINC01549A6NIU2 74 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms