RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 SFTA3P0C7M3 94 aa10.56□□□□□ -0.72
SUMO1-203ENST00000392246 CASC10Q5T4H9 136 aa10.56□□□□□ -0.72
SUMO1-203ENST00000392246 FAM231DQ6ZW35 169 aa10.56□□□□□ -0.72
SUMO1-203ENST00000392246 PTH2Q96A98 100 aa10.56□□□□□ -0.72
SUMO1-203ENST00000392246 RNASE7Q9H1E1 156 aaKnown RBP10.56□□□□□ -0.72
SUMO1-203ENST00000392246 KLK5Q9Y337 293 aaPredicted RBP10.56□□□□□ -0.72
SUMO1-203ENST00000392246 MED14OSP0DP75 135 aa10.55□□□□□ -0.72
SUMO1-203ENST00000392246 HTN3P15516 51 aa10.55□□□□□ -0.72
SUMO1-203ENST00000392246 ERVFC1-1P60608 527 aa10.55□□□□□ -0.72
SUMO1-203ENST00000392246 ZNF876PQ49A33 203 aa10.55□□□□□ -0.72
SUMO1-203ENST00000392246 COMMD7Q86VX2 200 aa10.55□□□□□ -0.72
SUMO1-203ENST00000392246 RPL23P62829 140 aaKnown RBP10.54□□□□□ -0.72
SUMO1-203ENST00000392246 NDUFAF3Q9BU61 184 aa10.54□□□□□ -0.72
SUMO1-203ENST00000392246 RPP21Q9H633 154 aaKnown RBP10.54□□□□□ -0.72
SUMO1-203ENST00000392246 SCRT2Q9NQ03 307 aa10.54□□□□□ -0.72
SUMO1-203ENST00000392246 PHLDA3Q9Y5J5 127 aa10.54□□□□□ -0.72
SUMO1-203ENST00000392246 ADIRFQ15847 76 aa10.53□□□□□ -0.72
SUMO1-203ENST00000392246 PIK3CD-AS1Q5SR53 167 aa10.53□□□□□ -0.72
SUMO1-203ENST00000392246 F5H768 121 aa10.53□□□□□ -0.72
SUMO1-203ENST00000392246 GATCO43716 136 aaKnown RBP10.53□□□□□ -0.72
SUMO1-203ENST00000392246 OR5AL1P0C617 328 aa10.53□□□□□ -0.72
SUMO1-203ENST00000392246 GZMBP10144 247 aa10.53□□□□□ -0.72
SUMO1-203ENST00000392246 SYT8Q8NBV8 401 aa10.53□□□□□ -0.72
SUMO1-203ENST00000392246 ISOC2Q96AB3 205 aa10.53□□□□□ -0.72
SUMO1-203ENST00000392246 SSBP4Q9BWG4 385 aaPredicted RBP10.53□□□□□ -0.72
SUMO1-203ENST00000392246 OSTCQ9NRP0 149 aa10.53□□□□□ -0.72
SUMO1-203ENST00000392246 STARD9Q9P2P6 4700 aa10.52□□□□□ -0.73
SUMO1-203ENST00000392246 TRAV4A0A0B4J268 109 aa10.52□□□□□ -0.73
SUMO1-203ENST00000392246 SNAI2O43623 268 aa10.52□□□□□ -0.73
SUMO1-203ENST00000392246 DMRTA1Q5VZB9 504 aa10.52□□□□□ -0.73
SUMO1-203ENST00000392246 C15orf54Q8N8G6 183 aa10.52□□□□□ -0.73
SUMO1-203ENST00000392246 OR4C5Q8NGB2 326 aa10.52□□□□□ -0.73
SUMO1-203ENST00000392246 IGLL5B9A064 214 aa10.51□□□□□ -0.73
SUMO1-203ENST00000392246 IGHV3-53P01767 116 aa10.51□□□□□ -0.73
SUMO1-203ENST00000392246 IGLC6P0CF74 106 aa10.51□□□□□ -0.73
SUMO1-203ENST00000392246 CT83Q5H943 113 aa10.51□□□□□ -0.73
SUMO1-203ENST00000392246 ZFP82Q8N141 532 aa10.51□□□□□ -0.73
SUMO1-203ENST00000392246 POM121L12Q8N7R1 296 aa10.51□□□□□ -0.73
SUMO1-203ENST00000392246 FER1L6-AS1Q8NA97 138 aa10.51□□□□□ -0.73
SUMO1-203ENST00000392246 SFRP2Q96HF1 295 aa10.51□□□□□ -0.73
SUMO1-203ENST00000392246 FAM210BQ96KR6 192 aa10.51□□□□□ -0.73
SUMO1-203ENST00000392246 A0A1W2PPQ1 181 aa10.5□□□□□ -0.73
SUMO1-203ENST00000392246 TMEM218A2RU14 115 aa10.5□□□□□ -0.73
SUMO1-203ENST00000392246 A8MWL6 223 aa10.5□□□□□ -0.73
SUMO1-203ENST00000392246 M0R381 172 aa10.5□□□□□ -0.73
SUMO1-203ENST00000392246 NACAE9PAV3 2078 aa10.5□□□□□ -0.73
SUMO1-203ENST00000392246 DYNC2H1Q8NCM8 4307 aaKnown RBP10.5□□□□□ -0.73
SUMO1-203ENST00000392246 IGHV4-4A0A075B6R2 117 aa10.49□□□□□ -0.73
SUMO1-203ENST00000392246 A8MWV9 139 aa10.49□□□□□ -0.73
SUMO1-203ENST00000392246 F2Z2F3 143 aa10.49□□□□□ -0.73
SUMO1-203ENST00000392246 RS1O15537 224 aa10.49□□□□□ -0.73
SUMO1-203ENST00000392246 CIDEAO60543 219 aa10.49□□□□□ -0.73
SUMO1-203ENST00000392246 HOXA5P20719 270 aa10.49□□□□□ -0.73
SUMO1-203ENST00000392246 TCTAP57738 103 aa10.49□□□□□ -0.73
SUMO1-203ENST00000392246 PNRC1Q12796 327 aaPredicted RBP10.49□□□□□ -0.73
SUMO1-203ENST00000392246 SPANXN1Q5VSR9 72 aa10.49□□□□□ -0.73
SUMO1-203ENST00000392246 CFAP126Q5VTH2 177 aa10.49□□□□□ -0.73
SUMO1-203ENST00000392246 OR10AG1Q8NH19 301 aa10.49□□□□□ -0.73
SUMO1-203ENST00000392246 ZNF479Q96JC4 524 aa10.49□□□□□ -0.73
SUMO1-203ENST00000392246 TPPP3Q9BW30 176 aa10.49□□□□□ -0.73
SUMO1-203ENST00000392246 SLAQ13239 276 aa10.48□□□□□ -0.73
SUMO1-203ENST00000392246 FHL2Q14192 279 aa10.48□□□□□ -0.73
SUMO1-203ENST00000392246 TMEM88Q6PEY1 159 aa10.48□□□□□ -0.73
SUMO1-203ENST00000392246 OR10G8Q8NGN5 311 aa10.48□□□□□ -0.73
SUMO1-203ENST00000392246 TRGV4A0A0C4DH28 118 aa10.48□□□□□ -0.73
SUMO1-203ENST00000392246 MUC21A0A0G2JKD1 596 aa10.48□□□□□ -0.73
SUMO1-203ENST00000392246 MUC21A0A140T8X8 626 aa10.48□□□□□ -0.73
SUMO1-203ENST00000392246 F8W036 122 aa10.48□□□□□ -0.73
SUMO1-203ENST00000392246 NXPH4O95158 308 aa10.48□□□□□ -0.73
SUMO1-203ENST00000392246 CACNG7P62955 275 aa10.48□□□□□ -0.73
SUMO1-203ENST00000392246 LYZL1Q6UWQ5 148 aa10.48□□□□□ -0.73
SUMO1-203ENST00000392246 V9GYV3 84 aa10.48□□□□□ -0.73
SUMO1-203ENST00000392246 TRAV26-1A0A087WT03 109 aa10.47□□□□□ -0.73
SUMO1-203ENST00000392246 TSKUQ8WUA8 353 aa10.47□□□□□ -0.73
SUMO1-203ENST00000392246 GTSF1Q8WW33 167 aa10.47□□□□□ -0.73
SUMO1-203ENST00000392246 SEC11CQ9BY50 192 aa10.47□□□□□ -0.73
SUMO1-203ENST00000392246 GFRA4Q9GZZ7 299 aa10.47□□□□□ -0.73
SUMO1-203ENST00000392246 PRO0255Q9UI72 69 aa10.47□□□□□ -0.73
SUMO1-203ENST00000392246 HHLA3Q9XRX5 114 aa10.47□□□□□ -0.73
SUMO1-203ENST00000392246 FAM231BA6NCW3 169 aa10.46□□□□□ -0.74
SUMO1-203ENST00000392246 ADCYAP1P18509 176 aa10.46□□□□□ -0.74
SUMO1-203ENST00000392246 CTRLP40313 264 aa10.46□□□□□ -0.74
SUMO1-203ENST00000392246 FOXA3P55318 350 aaPredicted RBP10.46□□□□□ -0.74
SUMO1-203ENST00000392246 SSTP61278 116 aa10.46□□□□□ -0.74
SUMO1-203ENST00000392246 WDR73Q6P4I2 378 aa10.46□□□□□ -0.74
SUMO1-203ENST00000392246 ZFP2Q6ZN57 461 aa10.46□□□□□ -0.74
SUMO1-203ENST00000392246 JPT2Q9H910 190 aa10.46□□□□□ -0.74
SUMO1-203ENST00000392246 APLNQ9ULZ1 77 aa10.46□□□□□ -0.74
SUMO1-203ENST00000392246 H3BNG1 76 aa10.45□□□□□ -0.74
SUMO1-203ENST00000392246 C15orf53Q8NAA6 179 aa10.45□□□□□ -0.74
SUMO1-203ENST00000392246 PLECQ15149 4684 aaKnown RBP10.45□□□□□ -0.74
SUMO1-203ENST00000392246 IGHV3-73A0A0B4J1V6 119 aa10.44□□□□□ -0.74
SUMO1-203ENST00000392246 A0A0J9YY99 117 aa10.44□□□□□ -0.74
SUMO1-203ENST00000392246 RHODO00212 210 aa10.44□□□□□ -0.74
SUMO1-203ENST00000392246 CRYBA4P53673 196 aa10.44□□□□□ -0.74
SUMO1-203ENST00000392246 CNFNQ9BYD5 112 aa10.44□□□□□ -0.74
SUMO1-203ENST00000392246 SAMD10Q9BYL1 202 aa10.44□□□□□ -0.74
SUMO1-203ENST00000392246 A0A087WWL8 130 aa10.43□□□□□ -0.74
SUMO1-203ENST00000392246 HIGD1CA8MV81 97 aa10.43□□□□□ -0.74
SUMO1-203ENST00000392246 PPP1R2P9O14990 202 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms