RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 CXorf51AA0A1B0GTR3 108 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 TMEM218A2RU14 115 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 NUPR2A6NF83 97 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 A6NIN4 97 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 OOSP1A8MZH6 123 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 APOC4-APOC2K7ER74 178 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 M0R2N4 97 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 HCRTO43612 131 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 MRPS14O60783 128 aaKnown RBP0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 TNFP01375 233 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 IFNA17P01571 189 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 IGLV3-1P01715 115 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 IGHV3-30P01768 117 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 APOC2P02655 101 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 GYPBP06028 91 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 CCKP06307 115 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 SMIM6P0DI80 62 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 IGHV3-30-5P0DP03 117 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 PIPP12273 146 aaPredicted RBP0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 IL9P15248 144 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 PDE6GP18545 87 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 FXYD4P59646 89 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 HSD52Q0P140 79 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 C9orf116Q5BN46 136 aaPredicted RBP0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 C9orf153Q5TBE3 101 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 SPANXN1Q5VSR9 72 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 Q6AWC8 147 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 RPL7L1Q6DKI1 246 aaKnown RBP0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 UNQ6190/PRO20217Q6UXQ8 127 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 LINC00322Q6ZN03 302 aaPredicted RBP0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 Q6ZS92 163 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 GTF2H5Q6ZYL4 71 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 Q8N8P6 123 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 ZNF563Q8TA94 476 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 TSKUQ8WUA8 353 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 ZCCHC13Q8WW36 166 aaKnown RBP0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 PPDPFLQ8WWR9 84 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 IFI27L1Q96BM0 104 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 MRPL57Q9BQC6 102 aaKnown RBP0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 ATG5Q9H1Y0 275 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 MED9Q9NWA0 146 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 IER3IP1Q9Y5U9 82 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 ANK1P16157 1881 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 NALCNQ8IZF0 1738 aa0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.5□□□□□ -2.33
TRAJ3-201ENST00000390534 COL4A4P53420 1690 aaPredicted RBP0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 USP54Q70EL1 1684 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 ADGRB1O14514 1584 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 ASCC3Q8N3C0 2202 aaKnown RBP0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 CFTRP13569 1480 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 TECTAO75443 2155 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 MYOM3Q5VTT5 1437 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 PTPRDP23468 1912 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 AKAP11Q9UKA4 1901 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 TRAV30A0A087WSZ9 112 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 IGLV3-32A0A0A0MS00 114 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 TRBV6-7A0A0A0MS04 114 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 IGKV3D-7A0A0C4DH55 119 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 IGKV3OR2-268A0A0C4DH90 116 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 TRBV10-1A0A0K0K1A3 114 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 LOC101927531A0A1B0GV80 90 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 TCRBV3S1A0A5B6 114 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 S100A8P05109 93 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 SPINK8P0C7L1 97 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 IFITM1P13164 125 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 CBLN1P23435 193 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 NPC2P61916 151 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 INSL4Q14641 139 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 SPATA45Q537H7 98 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 NCMAPQ5T1S8 102 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 GDF5OSQ5U4N7 250 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 KRTAP5-11Q6L8G4 156 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 SLC48A1Q6P1K1 146 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 LINC00299Q6ZSB3 139 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 SBSPONQ8IVN8 264 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 C8orf59Q8N0T1 100 aaPredicted RBP0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 SVBPQ8N300 66 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 ACBD7Q8N6N7 88 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 SPTSSBQ8NFR3 76 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 LINC00526Q96FQ7 95 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 DMAC1Q96GE9 116 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 OBSCN-AS1Q96MR7 158 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 ODF3Q96PU9 254 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 DSCR8Q96T75 97 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 KRTAP17-1Q9BYP8 105 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 RPRMQ9NS64 109 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 MRPL35Q9NZE8 188 aaKnown RBP0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 PLXNA2O75051 1894 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 SIP14410 1827 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 STRCP1A6NGW2 1772 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 RIMS1Q86UR5 1692 aaKnown RBP0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 WDR97A6NE52 1622 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 LRP5O75197 1615 aa0.49□□□□□ -2.33
TRAJ3-201ENST00000390534 MCM3APO60318 1980 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 ZNF518AQ6AHZ1 1483 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 KTN1Q86UP2 1357 aaKnown RBP0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 CCNB3Q8WWL7 1395 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 KIAA1549LQ6ZVL6 1849 aa0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 TNRC6BQ9UPQ9 1833 aaKnown RBP0.48□□□□□ -2.33
TRAJ3-201ENST00000390534 SORL1Q92673 2214 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms