RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 PRB4P10163 310 aaPredicted RBP0.64□□□□□ -2.31
TRAJ40-201ENST00000390497 ARPC4P59998 168 aa0.64□□□□□ -2.31
TRAJ40-201ENST00000390497 RPL37P61927 97 aaKnown RBP0.64□□□□□ -2.31
TRAJ40-201ENST00000390497 ZNF56Q15929 161 aa0.64□□□□□ -2.31
TRAJ40-201ENST00000390497 SCIMPQ6UWF3 145 aa0.64□□□□□ -2.31
TRAJ40-201ENST00000390497 C10orf95Q9H7T3 257 aa0.64□□□□□ -2.31
TRAJ40-201ENST00000390497 TMEM14BQ9NUH8 114 aa0.64□□□□□ -2.31
TRAJ40-201ENST00000390497 TMEM2Q9UHN6 1383 aa0.64□□□□□ -2.31
TRAJ40-201ENST00000390497 RREB1Q92766 1687 aa0.64□□□□□ -2.31
TRAJ40-201ENST00000390497 MUC4Q99102 2169 aa0.64□□□□□ -2.31
TRAJ40-201ENST00000390497 BCORL1Q5H9F3 1711 aa0.64□□□□□ -2.31
TRAJ40-201ENST00000390497 FCGBPQ9Y6R7 5405 aaPredicted RBP0.63□□□□□ -2.31
TRAJ40-201ENST00000390497 ADGRB1O14514 1584 aa0.63□□□□□ -2.31
TRAJ40-201ENST00000390497 PTPRMP28827 1452 aa0.63□□□□□ -2.31
TRAJ40-201ENST00000390497 CPDO75976 1380 aa0.63□□□□□ -2.31
TRAJ40-201ENST00000390497 A0A0D9SG42 100 aa0.63□□□□□ -2.31
TRAJ40-201ENST00000390497 FAM236AA0A1B0GUQ0 79 aa0.63□□□□□ -2.31
TRAJ40-201ENST00000390497 FAM236BA0A1B0GV22 79 aa0.63□□□□□ -2.31
TRAJ40-201ENST00000390497 TSTD1Q8NFU3 115 aa0.63□□□□□ -2.31
TRAJ40-201ENST00000390497 DSCR8Q96T75 97 aa0.63□□□□□ -2.31
TRAJ40-201ENST00000390497 BET1LQ9NYM9 111 aa0.63□□□□□ -2.31
TRAJ40-201ENST00000390497 DAPK1P53355 1430 aa0.63□□□□□ -2.31
TRAJ40-201ENST00000390497 ASCC3Q8N3C0 2202 aaKnown RBP0.62□□□□□ -2.31
TRAJ40-201ENST00000390497 ZNF142P52746 1687 aaPredicted RBP0.62□□□□□ -2.31
TRAJ40-201ENST00000390497 ZNF670-ZNF695F2Z2N8 137 aa0.62□□□□□ -2.31
TRAJ40-201ENST00000390497 K7ERU9 68 aa0.62□□□□□ -2.31
TRAJ40-201ENST00000390497 NPFFO15130 113 aa0.62□□□□□ -2.31
TRAJ40-201ENST00000390497 LINC00694P0DN24 101 aa0.62□□□□□ -2.31
TRAJ40-201ENST00000390497 PYYP10082 97 aa0.62□□□□□ -2.31
TRAJ40-201ENST00000390497 SPANXN1Q5VSR9 72 aa0.62□□□□□ -2.31
TRAJ40-201ENST00000390497 CYP2G1PQ6ZSU1 146 aa0.62□□□□□ -2.31
TRAJ40-201ENST00000390497 TMEM141Q96I45 108 aa0.62□□□□□ -2.31
TRAJ40-201ENST00000390497 PSMG3Q9BT73 122 aaPredicted RBP0.62□□□□□ -2.31
TRAJ40-201ENST00000390497 TMEM191AQ9H0A3 160 aa0.62□□□□□ -2.31
TRAJ40-201ENST00000390497 TPT1P8Q9HAU6 139 aa0.62□□□□□ -2.31
TRAJ40-201ENST00000390497 KCPQ6ZWJ8 1503 aa0.62□□□□□ -2.31
TRAJ40-201ENST00000390497 DLEC1Q9Y238 1755 aa0.62□□□□□ -2.31
TRAJ40-201ENST00000390497 MYH1P12882 1939 aa0.62□□□□□ -2.31
TRAJ40-201ENST00000390497 LY6G6CO95867 125 aa0.61□□□□□ -2.31
TRAJ40-201ENST00000390497 SLC25A6P12236 298 aa0.61□□□□□ -2.31
TRAJ40-201ENST00000390497 GUCA1AP43080 201 aaPredicted RBP0.61□□□□□ -2.31
TRAJ40-201ENST00000390497 RRAS2P62070 204 aaPredicted RBP0.61□□□□□ -2.31
TRAJ40-201ENST00000390497 RPS25P62851 125 aaKnown RBP0.61□□□□□ -2.31
TRAJ40-201ENST00000390497 LINC01545Q5VT33 79 aa0.61□□□□□ -2.31
TRAJ40-201ENST00000390497 GRIN2AQ12879 1464 aa0.61□□□□□ -2.31
TRAJ40-201ENST00000390497 FANCMQ8IYD8 2048 aa0.6□□□□□ -2.31
TRAJ40-201ENST00000390497 A0A096LNT2 108 aa0.6□□□□□ -2.31
TRAJ40-201ENST00000390497 HMGN1P05114 100 aa0.6□□□□□ -2.31
TRAJ40-201ENST00000390497 COPZ1P61923 177 aa0.6□□□□□ -2.31
TRAJ40-201ENST00000390497 SPCS2Q15005 226 aa0.6□□□□□ -2.31
TRAJ40-201ENST00000390497 OR2T2Q6IF00 324 aa0.6□□□□□ -2.31
TRAJ40-201ENST00000390497 SLC48A1Q6P1K1 146 aa0.6□□□□□ -2.31
TRAJ40-201ENST00000390497 Q6ZUT4 128 aa0.6□□□□□ -2.31
TRAJ40-201ENST00000390497 ZGRF1Q86YA3 2104 aa0.6□□□□□ -2.31
TRAJ40-201ENST00000390497 CCDC167Q9P0B6 97 aa0.6□□□□□ -2.31
TRAJ40-201ENST00000390497 CITO14578 2027 aa0.6□□□□□ -2.31
TRAJ40-201ENST00000390497 CHD3Q12873 2000 aaKnown RBP0.59□□□□□ -2.31
TRAJ40-201ENST00000390497 SOGA1O94964 1423 aa0.59□□□□□ -2.31
TRAJ40-201ENST00000390497 RBAKDNA6NC62 111 aa0.59□□□□□ -2.31
TRAJ40-201ENST00000390497 PIPP12273 146 aaPredicted RBP0.59□□□□□ -2.31
TRAJ40-201ENST00000390497 PLAC8Q9NZF1 115 aa0.59□□□□□ -2.31
TRAJ40-201ENST00000390497 EML5Q05BV3 1969 aa0.59□□□□□ -2.32
TRAJ40-201ENST00000390497 HELZP42694 1942 aaKnown RBP0.58□□□□□ -2.32
TRAJ40-201ENST00000390497 BICRAQ9NZM4 1560 aa0.58□□□□□ -2.32
TRAJ40-201ENST00000390497 SNRNP200O75643 2136 aaKnown RBP0.58□□□□□ -2.32
TRAJ40-201ENST00000390497 TANC2Q9HCD6 1990 aa0.58□□□□□ -2.32
TRAJ40-201ENST00000390497 IFNA17P01571 189 aa0.58□□□□□ -2.32
TRAJ40-201ENST00000390497 SPINK7P58062 85 aa0.58□□□□□ -2.32
TRAJ40-201ENST00000390497 SSBP1Q04837 148 aaKnown RBP0.58□□□□□ -2.32
TRAJ40-201ENST00000390497 CCDC58Q4VC31 144 aa0.58□□□□□ -2.32
TRAJ40-201ENST00000390497 FAM74A4Q5TZK3 123 aa0.58□□□□□ -2.32
TRAJ40-201ENST00000390497 MIC13Q5XKP0 118 aa0.58□□□□□ -2.32
TRAJ40-201ENST00000390497 IFI27L1Q96BM0 104 aa0.58□□□□□ -2.32
TRAJ40-201ENST00000390497 TSC22D3Q99576 134 aa0.58□□□□□ -2.32
TRAJ40-201ENST00000390497 NDUFA12Q9UI09 145 aa0.58□□□□□ -2.32
TRAJ40-201ENST00000390497 VIRMAQ69YN4 1812 aaKnown RBP0.58□□□□□ -2.32
TRAJ40-201ENST00000390497 PLXNA2O75051 1894 aa0.57□□□□□ -2.32
TRAJ40-201ENST00000390497 TRAV12-3A0A0B4J271 114 aa0.57□□□□□ -2.32
TRAJ40-201ENST00000390497 M0R129 80 aa0.57□□□□□ -2.32
TRAJ40-201ENST00000390497 PIRTP0C851 137 aa0.57□□□□□ -2.32
TRAJ40-201ENST00000390497 CCL3L1P16619 93 aa0.57□□□□□ -2.32
TRAJ40-201ENST00000390497 RPL7L1Q6DKI1 246 aaKnown RBP0.57□□□□□ -2.32
TRAJ40-201ENST00000390497 KRTAP19-3Q7Z4W3 81 aa0.57□□□□□ -2.32
TRAJ40-201ENST00000390497 TSKUQ8WUA8 353 aa0.57□□□□□ -2.32
TRAJ40-201ENST00000390497 COPS9Q8WXC6 57 aa0.57□□□□□ -2.32
TRAJ40-201ENST00000390497 CDK13Q14004 1512 aaKnown RBP0.57□□□□□ -2.32
TRAJ40-201ENST00000390497 ZFC3H1O60293 1989 aaKnown RBP0.57□□□□□ -2.32
TRAJ40-201ENST00000390497 ATG2AQ2TAZ0 1938 aa0.56□□□□□ -2.32
TRAJ40-201ENST00000390497 MED12Q93074 2177 aa0.56□□□□□ -2.32
TRAJ40-201ENST00000390497 A6NIN4 97 aa0.56□□□□□ -2.32
TRAJ40-201ENST00000390497 F2Z2F3 143 aa0.56□□□□□ -2.32
TRAJ40-201ENST00000390497 IL5P05113 134 aa0.56□□□□□ -2.32
TRAJ40-201ENST00000390497 SARNPP82979 210 aaKnown RBP0.56□□□□□ -2.32
TRAJ40-201ENST00000390497 EMX2Q04743 252 aa0.56□□□□□ -2.32
TRAJ40-201ENST00000390497 KCNRGQ8N5I3 272 aa0.56□□□□□ -2.32
TRAJ40-201ENST00000390497 ARL11Q969Q4 196 aa0.56□□□□□ -2.32
TRAJ40-201ENST00000390497 SPTSSAQ969W0 71 aa0.56□□□□□ -2.32
TRAJ40-201ENST00000390497 FAM103A1Q9BTL3 118 aaKnown RBP0.56□□□□□ -2.32
TRAJ40-201ENST00000390497 RPRMQ9NS64 109 aa0.56□□□□□ -2.32
TRAJ40-201ENST00000390497 TMEM242Q9NWH2 141 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 213.3 ms