RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 TEX43Q6ZNM6 134 aa10.09□□□□□ -0.79
PTPRN2-202ENST00000389416 GAGE10A6NGK3 116 aa10.09□□□□□ -0.79
PTPRN2-202ENST00000389416 DLX4Q92988 240 aaPredicted RBP10.09□□□□□ -0.79
PTPRN2-202ENST00000389416 LENEPQ9Y5L5 61 aa10.09□□□□□ -0.79
PTPRN2-202ENST00000389416 LINC01549A6NIU2 74 aa10.09□□□□□ -0.79
PTPRN2-202ENST00000389416 NDUFAF3Q9BU61 184 aa10.09□□□□□ -0.79
PTPRN2-202ENST00000389416 EXPH5Q8NEV8 1989 aa10.08□□□□□ -0.8
PTPRN2-202ENST00000389416 TMEM89A2RUT3 159 aa10.08□□□□□ -0.8
PTPRN2-202ENST00000389416 IGF1P05019 195 aa10.08□□□□□ -0.8
PTPRN2-202ENST00000389416 FABP2P12104 132 aa10.08□□□□□ -0.8
PTPRN2-202ENST00000389416 AVPP01185 164 aa10.08□□□□□ -0.8
PTPRN2-202ENST00000389416 HIST2H2BDQ6DRA6 164 aa10.08□□□□□ -0.8
PTPRN2-202ENST00000389416 NOP10Q9NPE3 64 aaKnown RBP10.08□□□□□ -0.8
PTPRN2-202ENST00000389416 LAMTOR2Q9Y2Q5 125 aa10.08□□□□□ -0.8
PTPRN2-202ENST00000389416 CRYGBP07316 175 aa10.08□□□□□ -0.8
PTPRN2-202ENST00000389416 RNASE1P07998 156 aaKnown RBP10.08□□□□□ -0.8
PTPRN2-202ENST00000389416 WIPF2Q8TF74 440 aaPredicted RBP10.08□□□□□ -0.8
PTPRN2-202ENST00000389416 COPS9Q8WXC6 57 aa10.08□□□□□ -0.8
PTPRN2-202ENST00000389416 PYGO2Q9BRQ0 406 aa10.07□□□□□ -0.8
PTPRN2-202ENST00000389416 C11orf68Q9H3H3 251 aaKnown RBP10.07□□□□□ -0.8
PTPRN2-202ENST00000389416 ZNF815PA8K554 130 aa10.07□□□□□ -0.8
PTPRN2-202ENST00000389416 RBAKDNA6NC62 111 aa10.07□□□□□ -0.8
PTPRN2-202ENST00000389416 TYMSP04818 313 aa10.07□□□□□ -0.8
PTPRN2-202ENST00000389416 A0A096LPF7 62 aa10.07□□□□□ -0.8
PTPRN2-202ENST00000389416 MYCNOSP40205 109 aa10.06□□□□□ -0.8
PTPRN2-202ENST00000389416 C2orf66Q6UXQ4 117 aa10.06□□□□□ -0.8
PTPRN2-202ENST00000389416 hDV102S1A0JD36 115 aa10.06□□□□□ -0.8
PTPRN2-202ENST00000389416 SYS1-DBNDD2H3BUS1 97 aa10.06□□□□□ -0.8
PTPRN2-202ENST00000389416 LY6G6DO95868 133 aa10.06□□□□□ -0.8
PTPRN2-202ENST00000389416 NPYP01303 97 aa10.06□□□□□ -0.8
PTPRN2-202ENST00000389416 Q6ZSV7 163 aa10.06□□□□□ -0.8
PTPRN2-202ENST00000389416 C4orf3Q8WVX3 66 aa10.06□□□□□ -0.8
PTPRN2-202ENST00000389416 ZC2HC1BQ5TFG8 222 aa10.06□□□□□ -0.8
PTPRN2-202ENST00000389416 TP53TG1Q9Y2A0 90 aa10.06□□□□□ -0.8
PTPRN2-202ENST00000389416 U3KQE9 123 aa10.06□□□□□ -0.8
PTPRN2-202ENST00000389416 Q0VG73 95 aa10.06□□□□□ -0.8
PTPRN2-202ENST00000389416 ZNF48Q96MX3 618 aaPredicted RBP10.06□□□□□ -0.8
PTPRN2-202ENST00000389416 IGLC2P0DOY2 106 aa10.05□□□□□ -0.8
PTPRN2-202ENST00000389416 PYY3Q5JQD4 70 aa10.05□□□□□ -0.8
PTPRN2-202ENST00000389416 PIFOQ8TCI5 191 aa10.05□□□□□ -0.8
PTPRN2-202ENST00000389416 SPXQ9BT56 116 aa10.05□□□□□ -0.8
PTPRN2-202ENST00000389416 SFTA2Q6UW10 78 aa10.05□□□□□ -0.8
PTPRN2-202ENST00000389416 ZNF503Q96F45 646 aa10.05□□□□□ -0.8
PTPRN2-202ENST00000389416 MSRB1Q9NZV6 116 aa10.04□□□□□ -0.8
PTPRN2-202ENST00000389416 TRAV2A0A0B4J234 112 aa10.04□□□□□ -0.8
PTPRN2-202ENST00000389416 A0A1B0GV72 72 aa10.04□□□□□ -0.8
PTPRN2-202ENST00000389416 SMIM13P0DJ93 91 aa10.04□□□□□ -0.8
PTPRN2-202ENST00000389416 M0R2P5 195 aa10.04□□□□□ -0.8
PTPRN2-202ENST00000389416 Q6ZS46 218 aa10.04□□□□□ -0.8
PTPRN2-202ENST00000389416 NDUFS6O75380 124 aaKnown RBP10.04□□□□□ -0.8
PTPRN2-202ENST00000389416 LINC01559Q495D7 138 aa10.03□□□□□ -0.8
PTPRN2-202ENST00000389416 IGF2BP2-AS1Q96M15 143 aa10.03□□□□□ -0.8
PTPRN2-202ENST00000389416 SMR3AQ99954 134 aa10.03□□□□□ -0.8
PTPRN2-202ENST00000389416 CPAMD8Q8IZJ3 1885 aa10.03□□□□□ -0.8
PTPRN2-202ENST00000389416 NHP2Q9NX24 153 aaKnown RBP10.03□□□□□ -0.8
PTPRN2-202ENST00000389416 SIGLEC8Q9NYZ4 499 aa10.03□□□□□ -0.8
PTPRN2-202ENST00000389416 CENPEQ02224 2701 aa10.02□□□□□ -0.8
PTPRN2-202ENST00000389416 A0A0J9YY99 117 aa10.02□□□□□ -0.8
PTPRN2-202ENST00000389416 I3L3M4 83 aa10.02□□□□□ -0.8
PTPRN2-202ENST00000389416 MTURNQ8N3F0 131 aa10.02□□□□□ -0.8
PTPRN2-202ENST00000389416 Q8N8P6 123 aa10.02□□□□□ -0.8
PTPRN2-202ENST00000389416 TRIOO75962 3097 aa10.02□□□□□ -0.81
PTPRN2-202ENST00000389416 GATA1P15976 413 aaPredicted RBP10.02□□□□□ -0.81
PTPRN2-202ENST00000389416 SMIM2Q9BVW6 85 aa10.02□□□□□ -0.81
PTPRN2-202ENST00000389416 LINC00158P58513 81 aa10.02□□□□□ -0.81
PTPRN2-202ENST00000389416 CKS1BP61024 79 aa10.02□□□□□ -0.81
PTPRN2-202ENST00000389416 TRBV25-1A0A075B6N4 114 aa10.01□□□□□ -0.81
PTPRN2-202ENST00000389416 SEC11AP67812 179 aa10.01□□□□□ -0.81
PTPRN2-202ENST00000389416 TRBV7-9A0A0J9YWB2 115 aa10.01□□□□□ -0.81
PTPRN2-202ENST00000389416 GAGE6Q13070 117 aa10.01□□□□□ -0.81
PTPRN2-202ENST00000389416 C6orf226Q5I0X4 101 aa10.01□□□□□ -0.81
PTPRN2-202ENST00000389416 ADAMTSL5Q6ZMM2 481 aa10.01□□□□□ -0.81
PTPRN2-202ENST00000389416 PAX4O43316 350 aa10.01□□□□□ -0.81
PTPRN2-202ENST00000389416 Q8N6K4 173 aa10.01□□□□□ -0.81
PTPRN2-202ENST00000389416 STPG4Q8N801 248 aa10.01□□□□□ -0.81
PTPRN2-202ENST00000389416 F8P00451 2351 aa10.01□□□□□ -0.81
PTPRN2-202ENST00000389416 PLNP26678 52 aa10□□□□□ -0.81
PTPRN2-202ENST00000389416 NPC2P61916 151 aa10□□□□□ -0.81
PTPRN2-202ENST00000389416 C9orf47Q6ZRZ4 202 aa10□□□□□ -0.81
PTPRN2-202ENST00000389416 Q8N1Y9 231 aa10□□□□□ -0.81
PTPRN2-202ENST00000389416 KLF12Q9Y4X4 402 aa10□□□□□ -0.81
PTPRN2-202ENST00000389416 DNAL4O96015 105 aa10□□□□□ -0.81
PTPRN2-202ENST00000389416 TRAV25A0A0B4J276 109 aa9.99□□□□□ -0.81
PTPRN2-202ENST00000389416 DEFB135Q30KP9 77 aa9.99□□□□□ -0.81
PTPRN2-202ENST00000389416 ZMAT4Q9H898 229 aa9.99□□□□□ -0.81
PTPRN2-202ENST00000389416 ESM1Q9NQ30 184 aa9.99□□□□□ -0.81
PTPRN2-202ENST00000389416 PSCAO43653 123 aa9.99□□□□□ -0.81
PTPRN2-202ENST00000389416 TMEM243Q9BU79 118 aa9.99□□□□□ -0.81
PTPRN2-202ENST00000389416 ZNF625Q96I27 306 aaPredicted RBP9.98□□□□□ -0.81
PTPRN2-202ENST00000389416 MRPS16Q9Y3D3 137 aaKnown RBP9.98□□□□□ -0.81
PTPRN2-202ENST00000389416 A0A0J9YX75 114 aa9.98□□□□□ -0.81
PTPRN2-202ENST00000389416 DEFB4AO15263 64 aa9.98□□□□□ -0.81
PTPRN2-202ENST00000389416 HLA-DRB4P13762 266 aa9.98□□□□□ -0.81
PTPRN2-202ENST00000389416 SS18Q15532 418 aa9.98□□□□□ -0.81
PTPRN2-202ENST00000389416 HLA-DRB4X5D2U9 266 aa9.98□□□□□ -0.81
PTPRN2-202ENST00000389416 MORN3Q6PF18 240 aaPredicted RBP9.98□□□□□ -0.81
PTPRN2-202ENST00000389416 LINC01006Q8NI28 216 aa9.98□□□□□ -0.81
PTPRN2-202ENST00000389416 ADAMTS20P59510 1910 aa9.97□□□□□ -0.81
PTPRN2-202ENST00000389416 GTSF1Q8WW33 167 aa9.97□□□□□ -0.81
PTPRN2-202ENST00000389416 RASL10AQ92737 203 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms