RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 ZNF503Q96F45 646 aa13.38□□□□□ -0.27
SGCB-201ENST00000381431 C1orf229Q6ZS94 237 aaPredicted RBP13.38□□□□□ -0.27
SGCB-201ENST00000381431 Q96MF0 132 aa13.38□□□□□ -0.27
SGCB-201ENST00000381431 ANKRD39Q53RE8 183 aa13.38□□□□□ -0.27
SGCB-201ENST00000381431 CRPP02741 224 aa13.37□□□□□ -0.27
SGCB-201ENST00000381431 HLA-DRB4P13762 266 aa13.37□□□□□ -0.27
SGCB-201ENST00000381431 DEFB112Q30KQ8 113 aa13.37□□□□□ -0.27
SGCB-201ENST00000381431 Q8N9W7 124 aa13.37□□□□□ -0.27
SGCB-201ENST00000381431 HLA-DRB4X5D2U9 266 aa13.37□□□□□ -0.27
SGCB-201ENST00000381431 BUB3O43684 328 aa13.37□□□□□ -0.27
SGCB-201ENST00000381431 IGHV4-38-2P0DP08 117 aa13.37□□□□□ -0.27
SGCB-201ENST00000381431 DEFB1P60022 68 aa13.37□□□□□ -0.27
SGCB-201ENST00000381431 ZNRF2Q8NHG8 242 aa13.37□□□□□ -0.27
SGCB-201ENST00000381431 BPTFQ12830 3046 aa13.37□□□□□ -0.27
SGCB-201ENST00000381431 I3L3M4 83 aa13.37□□□□□ -0.27
SGCB-201ENST00000381431 K7EP13 123 aa13.37□□□□□ -0.27
SGCB-201ENST00000381431 Q8N7P7 452 aa13.36□□□□□ -0.27
SGCB-201ENST00000381431 RHODO00212 210 aa13.36□□□□□ -0.27
SGCB-201ENST00000381431 C1QTNF4Q9BXJ3 329 aa13.36□□□□□ -0.27
SGCB-201ENST00000381431 TTTY13Q9BZ97 58 aa13.36□□□□□ -0.27
SGCB-201ENST00000381431 PRSS29PA6NIE9 313 aa13.36□□□□□ -0.27
SGCB-201ENST00000381431 VWC2LB2RUY7 222 aa13.36□□□□□ -0.27
SGCB-201ENST00000381431 LINC01619G3V211 115 aa13.36□□□□□ -0.27
SGCB-201ENST00000381431 CMC4P56277 68 aaPredicted RBP13.36□□□□□ -0.27
SGCB-201ENST00000381431 DEFB136Q30KP8 78 aa13.36□□□□□ -0.27
SGCB-201ENST00000381431 H3BMG7 143 aa13.36□□□□□ -0.27
SGCB-201ENST00000381431 IGF2-ASQ6U949 168 aa13.36□□□□□ -0.27
SGCB-201ENST00000381431 JPT2Q9H910 190 aa13.36□□□□□ -0.27
SGCB-201ENST00000381431 S100A7L2Q5SY68 101 aa13.35□□□□□ -0.27
SGCB-201ENST00000381431 ZFP36P26651 326 aaKnown RBP13.35□□□□□ -0.27
SGCB-201ENST00000381431 NPBQ8NG41 125 aa13.35□□□□□ -0.27
SGCB-201ENST00000381431 ADORA2A-AS1P86434 159 aa13.35□□□□□ -0.27
SGCB-201ENST00000381431 Q8NA96 180 aa13.34□□□□□ -0.27
SGCB-201ENST00000381431 GAGE7O76087 117 aa13.34□□□□□ -0.27
SGCB-201ENST00000381431 GAGE12FP0CL80 117 aa13.34□□□□□ -0.27
SGCB-201ENST00000381431 GAGE12GP0CL81 117 aa13.34□□□□□ -0.27
SGCB-201ENST00000381431 GAGE12IP0CL82 117 aa13.34□□□□□ -0.27
SGCB-201ENST00000381431 TMEM141Q96I45 108 aa13.34□□□□□ -0.27
SGCB-201ENST00000381431 KIAA1549Q9HCM3 1950 aa13.34□□□□□ -0.27
SGCB-201ENST00000381431 HCFC1P51610 2035 aa13.34□□□□□ -0.27
SGCB-201ENST00000381431 RPL39LQ96EH5 51 aaKnown RBP13.34□□□□□ -0.27
SGCB-201ENST00000381431 KLF12Q9Y4X4 402 aa13.34□□□□□ -0.27
SGCB-201ENST00000381431 IGHV4-30-2A0A087WSY4 118 aa13.33□□□□□ -0.27
SGCB-201ENST00000381431 SLC25A20O43772 301 aa13.33□□□□□ -0.27
SGCB-201ENST00000381431 IGKV1D-37A0A075B6S9 117 aa13.33□□□□□ -0.28
SGCB-201ENST00000381431 NRGNQ92686 78 aa13.33□□□□□ -0.28
SGCB-201ENST00000381431 AJUBAQ96IF1 538 aa13.33□□□□□ -0.28
SGCB-201ENST00000381431 C20orf78Q9BR46 151 aa13.33□□□□□ -0.28
SGCB-201ENST00000381431 NDUFA12Q9UI09 145 aa13.33□□□□□ -0.28
SGCB-201ENST00000381431 DSCAMO60469 2012 aa13.33□□□□□ -0.28
SGCB-201ENST00000381431 A0A1W2PPM0 123 aa13.32□□□□□ -0.28
SGCB-201ENST00000381431 CCL25O15444 150 aa13.32□□□□□ -0.28
SGCB-201ENST00000381431 AZU1P20160 251 aa13.32□□□□□ -0.28
SGCB-201ENST00000381431 J3QQQ9 107 aa13.31□□□□□ -0.28
SGCB-201ENST00000381431 LINC00322Q6ZN03 302 aaPredicted RBP13.31□□□□□ -0.28
SGCB-201ENST00000381431 K7EP34 96 aa13.31□□□□□ -0.28
SGCB-201ENST00000381431 HOXD3P31249 432 aaPredicted RBP13.31□□□□□ -0.28
SGCB-201ENST00000381431 FANCD2OSQ96PS1 177 aa13.31□□□□□ -0.28
SGCB-201ENST00000381431 PFN2P35080 140 aa13.31□□□□□ -0.28
SGCB-201ENST00000381431 ZFAND6Q6FIF0 208 aa13.31□□□□□ -0.28
SGCB-201ENST00000381431 INS-IGF2F8WCM5 200 aa13.3□□□□□ -0.28
SGCB-201ENST00000381431 K7EMI3 77 aa13.3□□□□□ -0.28
SGCB-201ENST00000381431 SPINK8P0C7L1 97 aa13.3□□□□□ -0.28
SGCB-201ENST00000381431 TSSC4Q9Y5U2 329 aaPredicted RBP13.3□□□□□ -0.28
SGCB-201ENST00000381431 CRYGCP07315 174 aa13.3□□□□□ -0.28
SGCB-201ENST00000381431 ELANEP08246 267 aa13.3□□□□□ -0.28
SGCB-201ENST00000381431 CEND1Q8N111 149 aa13.3□□□□□ -0.28
SGCB-201ENST00000381431 Q71RC1 249 aaPredicted RBP13.3□□□□□ -0.28
SGCB-201ENST00000381431 DEFB125Q8N687 156 aa13.3□□□□□ -0.28
SGCB-201ENST00000381431 TRBV25-1A0A075B6N4 114 aa13.29□□□□□ -0.28
SGCB-201ENST00000381431 FGF6P10767 208 aa13.29□□□□□ -0.28
SGCB-201ENST00000381431 LEPROTO15243 131 aa13.29□□□□□ -0.28
SGCB-201ENST00000381431 LINC01545Q5VT33 79 aa13.29□□□□□ -0.28
SGCB-201ENST00000381431 LENEPQ9Y5L5 61 aa13.29□□□□□ -0.28
SGCB-201ENST00000381431 MTORP42345 2549 aa13.29□□□□□ -0.28
SGCB-201ENST00000381431 LRRK2Q5S007 2527 aa13.29□□□□□ -0.28
SGCB-201ENST00000381431 ATP6V0BQ99437 205 aa13.28□□□□□ -0.28
SGCB-201ENST00000381431 ZNF493Q6ZR52 646 aa13.28□□□□□ -0.28
SGCB-201ENST00000381431 RBAKDNA6NC62 111 aa13.28□□□□□ -0.28
SGCB-201ENST00000381431 IGLV2-8P01709 118 aa13.28□□□□□ -0.28
SGCB-201ENST00000381431 C12orf74Q32Q52 190 aa13.28□□□□□ -0.28
SGCB-201ENST00000381431 PRO1854Q9UHT4 67 aa13.27□□□□□ -0.28
SGCB-201ENST00000381431 WI2-2373I1.2A0A1W2PRP0 233 aa13.27□□□□□ -0.28
SGCB-201ENST00000381431 GAGE6Q13070 117 aa13.27□□□□□ -0.28
SGCB-201ENST00000381431 MRPL53Q96EL3 112 aaKnown RBP13.27□□□□□ -0.28
SGCB-201ENST00000381431 C5orf56Q8N8D9 126 aa13.26□□□□□ -0.29
SGCB-201ENST00000381431 C19orf71A6NCJ1 209 aa13.25□□□□□ -0.29
SGCB-201ENST00000381431 VPREB3Q9UKI3 123 aa13.25□□□□□ -0.29
SGCB-201ENST00000381431 MKI67P46013 3256 aaKnown RBP13.25□□□□□ -0.29
SGCB-201ENST00000381431 TRBV20-1A0A075B6N2 111 aa13.25□□□□□ -0.29
SGCB-201ENST00000381431 PRB1P04280 392 aa13.25□□□□□ -0.29
SGCB-201ENST00000381431 H3BUA1 57 aa13.25□□□□□ -0.29
SGCB-201ENST00000381431 EIF4EBP1Q13541 118 aaPredicted RBP13.25□□□□□ -0.29
SGCB-201ENST00000381431 APRG1Q8IVJ8 170 aa13.25□□□□□ -0.29
SGCB-201ENST00000381431 J3QLI3 93 aa13.24□□□□□ -0.29
SGCB-201ENST00000381431 SIVA1O15304 175 aa13.24□□□□□ -0.29
SGCB-201ENST00000381431 NXPH4O95158 308 aa13.24□□□□□ -0.29
SGCB-201ENST00000381431 CDH23Q9H251 3354 aa13.24□□□□□ -0.29
SGCB-201ENST00000381431 A0A096LPF7 62 aa13.24□□□□□ -0.29
SGCB-201ENST00000381431 SLURP1P55000 103 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms