RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TRAV10A0A0B4J240 114 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 FABP5P3A8MUU1 101 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 IGKV2D-40P01614 121 aaPredicted RBP5.07□□□□□ -1.6
NEDD9-202ENST00000379446 RPS20P60866 119 aaKnown RBP5.07□□□□□ -1.6
NEDD9-202ENST00000379446 NHP2Q9NX24 153 aaKnown RBP5.07□□□□□ -1.6
NEDD9-202ENST00000379446 DSCAML1Q8TD84 2053 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 PLXNB1O43157 2135 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 FREM2Q5SZK8 3169 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 LOC107984156A0A0G2JMH3 177 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 IGHV4-30-4P0DP06 118 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 GUSBP1Q15486 140 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 MRPL52Q86TS9 123 aaKnown RBP5.07□□□□□ -1.6
NEDD9-202ENST00000379446 ARL17AQ8IVW1 177 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 Q8N9W7 124 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 KIR3DS1Q14943 382 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 Q6ZQT7 251 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 TMEM136Q6ZRR5 245 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 MRPL32Q9BYC8 188 aaKnown RBP5.07□□□□□ -1.6
NEDD9-202ENST00000379446 Q9H3A6 140 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 NCOR1P1Q9H4R4 102 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 TMEM160Q9NX00 188 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 A0A1B0GWB2 263 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 A8MWL6 223 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 APOHP02749 345 aaPredicted RBP5.07□□□□□ -1.6
NEDD9-202ENST00000379446 Q0VG73 95 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 ETDBQ3ZM63 59 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 MYOZ3Q8TDC0 251 aa5.07□□□□□ -1.6
NEDD9-202ENST00000379446 TRBV9A0A0B4J1U6 114 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 NPIPB5A8MRT5 1133 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 M0R3E3 92 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 LINC00310P59036 64 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 HERVK_113P61574 105 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 PAPPA-AS1Q5QFB9 102 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 ADAMTSL5Q6ZMM2 481 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 LINC00311Q8N616 119 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 MS4A6AQ9H2W1 248 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 ST20Q9HBF5 79 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 RETNQ9HD89 108 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.06□□□□□ -1.6
NEDD9-202ENST00000379446 SYS1-DBNDD2H3BUS1 97 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 BRI3O95415 125 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 P0DMU3 169 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 FAM231AP0DMU4 169 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 FAM231CP0DMU5 169 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 GYPEP15421 78 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 SCGB1D4Q6XE38 83 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 RNF182Q8N6D2 247 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 Q8TAT8 98 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 GTSF1Q8WW33 167 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 NXT2Q9NPJ8 142 aaKnown RBP5.06□□□□□ -1.6
NEDD9-202ENST00000379446 MRPL16Q9NX20 251 aaKnown RBP5.06□□□□□ -1.6
NEDD9-202ENST00000379446 TRAV26-1A0A087WT03 109 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 A0A0J9YWU9 116 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 ATP5LO75964 103 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 APOMO95445 188 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 COX19Q49B96 90 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 AMTNQ6UX39 209 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 ZNF491Q8N8L2 437 aa5.06□□□□□ -1.6
NEDD9-202ENST00000379446 IZUMO1RA6ND01 250 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 F6UB75 175 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 WDFY4Q6ZS81 3184 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 K7ERJ3 54 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 PPBPP02775 128 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 C4orf48Q5BLP8 95 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 OR5A1Q8NGJ0 315 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 MUC7Q8TAX7 377 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 TRAV25A0A0B4J276 109 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 RBMY1BA6NDE4 496 aaKnown RBP5.05□□□□□ -1.6
NEDD9-202ENST00000379446 RBMY1EA6NEQ0 496 aaKnown RBP5.05□□□□□ -1.6
NEDD9-202ENST00000379446 TOMM40O96008 361 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 RBMY1DP0C7P1 496 aaKnown RBP5.05□□□□□ -1.6
NEDD9-202ENST00000379446 P0C879 139 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 SMIM13P0DJ93 91 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 SAMD5Q5TGI4 173 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 SH2D6Q7Z4S9 175 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 NUP35Q8NFH5 326 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 V9GYV3 84 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 ZNF815PA8K554 130 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 J3QL48 77 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 HSD52Q0P140 79 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 GAGE6Q13070 117 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 NEGR1Q7Z3B1 354 aa5.05□□□□□ -1.6
NEDD9-202ENST00000379446 NANOS2P60321 138 aaKnown RBP5.04□□□□□ -1.6
NEDD9-202ENST00000379446 SS18Q15532 418 aa5.04□□□□□ -1.6
NEDD9-202ENST00000379446 ATP6V0BQ99437 205 aa5.04□□□□□ -1.6
NEDD9-202ENST00000379446 SS18L2Q9UHA2 77 aa5.04□□□□□ -1.6
NEDD9-202ENST00000379446 A0A087WWL8 130 aa5.04□□□□□ -1.6
NEDD9-202ENST00000379446 H7C2G1 150 aa5.04□□□□□ -1.6
NEDD9-202ENST00000379446 HBBP68871 147 aa5.04□□□□□ -1.6
NEDD9-202ENST00000379446 ODF1Q14990 250 aa5.04□□□□□ -1.6
NEDD9-202ENST00000379446 C1orf229Q6ZS94 237 aaPredicted RBP5.04□□□□□ -1.6
NEDD9-202ENST00000379446 EXOC3-AS1Q8N2X6 119 aa5.04□□□□□ -1.6
NEDD9-202ENST00000379446 FAM90A9PA6NNJ1 464 aa5.04□□□□□ -1.6
NEDD9-202ENST00000379446 PEX7O00628 323 aa5.04□□□□□ -1.6
NEDD9-202ENST00000379446 ZNF833PQ6ZTB9 187 aa5.04□□□□□ -1.6
NEDD9-202ENST00000379446 ZNRF2Q8NHG8 242 aa5.04□□□□□ -1.6
NEDD9-202ENST00000379446 TTTY13Q9BZ97 58 aa5.04□□□□□ -1.6
NEDD9-202ENST00000379446 TRAV13-1A0A0B4J241 112 aa5.04□□□□□ -1.6
NEDD9-202ENST00000379446 CTRLP40313 264 aa5.04□□□□□ -1.6
NEDD9-202ENST00000379446 HCFC1P51610 2035 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms