RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 BTF3P20290 206 aaKnown RBP13.04□□□□□ -0.32
TMEM88B-201ENST00000378821 ZNF575Q86XF7 245 aa13.04□□□□□ -0.32
TMEM88B-201ENST00000378821 C9orf85Q96MD7 179 aa13.04□□□□□ -0.32
TMEM88B-201ENST00000378821 KRTAP1-5Q9BYS1 174 aa13.04□□□□□ -0.32
TMEM88B-201ENST00000378821 SFTA3P0C7M3 94 aa13.03□□□□□ -0.32
TMEM88B-201ENST00000378821 BCL2P10415 239 aa13.03□□□□□ -0.32
TMEM88B-201ENST00000378821 RNASE3P12724 160 aaKnown RBP13.03□□□□□ -0.32
TMEM88B-201ENST00000378821 MEF2BQ02080 365 aaPredicted RBP13.03□□□□□ -0.32
TMEM88B-201ENST00000378821 ZNF674Q2M3X9 581 aa13.03□□□□□ -0.32
TMEM88B-201ENST00000378821 FAM162BQ5T6X4 162 aa13.03□□□□□ -0.32
TMEM88B-201ENST00000378821 TXNDC17Q9BRA2 123 aa13.03□□□□□ -0.32
TMEM88B-201ENST00000378821 DERL1Q9BUN8 251 aa13.03□□□□□ -0.32
TMEM88B-201ENST00000378821 ORM1P02763 201 aa13.02□□□□□ -0.33
TMEM88B-201ENST00000378821 RPL35P42766 123 aaKnown RBP13.02□□□□□ -0.33
TMEM88B-201ENST00000378821 TTC32Q5I0X7 151 aa13.02□□□□□ -0.33
TMEM88B-201ENST00000378821 ZNF479Q96JC4 524 aa13.02□□□□□ -0.33
TMEM88B-201ENST00000378821 MLST8Q9BVC4 326 aa13.02□□□□□ -0.33
TMEM88B-201ENST00000378821 B4DEV8 164 aa13.01□□□□□ -0.33
TMEM88B-201ENST00000378821 KRBOX1C9JBD0 128 aa13.01□□□□□ -0.33
TMEM88B-201ENST00000378821 M0R036 132 aa13.01□□□□□ -0.33
TMEM88B-201ENST00000378821 FHL2Q14192 279 aa13.01□□□□□ -0.33
TMEM88B-201ENST00000378821 BAGE2Q86Y30 109 aa13.01□□□□□ -0.33
TMEM88B-201ENST00000378821 TRAV4A0A0B4J268 109 aa13□□□□□ -0.33
TMEM88B-201ENST00000378821 C9JCJ5 164 aa13□□□□□ -0.33
TMEM88B-201ENST00000378821 BLOC1S1P78537 153 aa13□□□□□ -0.33
TMEM88B-201ENST00000378821 VAX2Q9UIW0 290 aa13□□□□□ -0.33
TMEM88B-201ENST00000378821 PDE6DO43924 150 aa12.99□□□□□ -0.33
TMEM88B-201ENST00000378821 ASIPP42127 132 aa12.99□□□□□ -0.33
TMEM88B-201ENST00000378821 SLAQ13239 276 aa12.99□□□□□ -0.33
TMEM88B-201ENST00000378821 LINC01559Q495D7 138 aa12.99□□□□□ -0.33
TMEM88B-201ENST00000378821 ZNF876PQ49A33 203 aa12.99□□□□□ -0.33
TMEM88B-201ENST00000378821 TMSB15BA0A087X1C1 80 aa12.98□□□□□ -0.33
TMEM88B-201ENST00000378821 TRGV4A0A0C4DH28 118 aa12.98□□□□□ -0.33
TMEM88B-201ENST00000378821 GRIFINA4D1Z8 144 aa12.98□□□□□ -0.33
TMEM88B-201ENST00000378821 PGPEP1LA6NFU8 196 aa12.98□□□□□ -0.33
TMEM88B-201ENST00000378821 H3BVH4 76 aa12.98□□□□□ -0.33
TMEM88B-201ENST00000378821 PAX4O43316 350 aa12.98□□□□□ -0.33
TMEM88B-201ENST00000378821 S100A4P26447 101 aaKnown RBP12.98□□□□□ -0.33
TMEM88B-201ENST00000378821 CRYBA4P53673 196 aa12.98□□□□□ -0.33
TMEM88B-201ENST00000378821 CENPWQ5EE01 88 aa12.98□□□□□ -0.33
TMEM88B-201ENST00000378821 ZNF506Q5JVG8 444 aa12.98□□□□□ -0.33
TMEM88B-201ENST00000378821 OR4C5Q8NGB2 326 aa12.98□□□□□ -0.33
TMEM88B-201ENST00000378821 LYPD6BQ8NI32 183 aa12.98□□□□□ -0.33
TMEM88B-201ENST00000378821 PRO0255Q9UI72 69 aa12.98□□□□□ -0.33
TMEM88B-201ENST00000378821 TAGLN2P37802 199 aaKnown RBP12.97□□□□□ -0.33
TMEM88B-201ENST00000378821 DNLZQ5SXM8 178 aa12.97□□□□□ -0.33
TMEM88B-201ENST00000378821 PTH2Q96A98 100 aa12.97□□□□□ -0.33
TMEM88B-201ENST00000378821 IL36BQ9NZH7 164 aa12.97□□□□□ -0.33
TMEM88B-201ENST00000378821 HHLA3Q9XRX5 114 aa12.97□□□□□ -0.33
TMEM88B-201ENST00000378821 RYR1P21817 5038 aa12.97□□□□□ -0.33
TMEM88B-201ENST00000378821 RAB19A4D1S5 217 aa12.96□□□□□ -0.33
TMEM88B-201ENST00000378821 CDK2AP2O75956 126 aa12.96□□□□□ -0.33
TMEM88B-201ENST00000378821 RPL19P84098 196 aaKnown RBP12.96□□□□□ -0.33
TMEM88B-201ENST00000378821 PRR27Q6MZM9 219 aa12.96□□□□□ -0.33
TMEM88B-201ENST00000378821 MED9Q9NWA0 146 aa12.96□□□□□ -0.33
TMEM88B-201ENST00000378821 ICOSQ9Y6W8 199 aa12.96□□□□□ -0.33
TMEM88B-201ENST00000378821 C16orf90A8MZG2 172 aa12.95□□□□□ -0.34
TMEM88B-201ENST00000378821 RS1O15537 224 aa12.95□□□□□ -0.34
TMEM88B-201ENST00000378821 IGLV2-8P01709 118 aa12.95□□□□□ -0.34
TMEM88B-201ENST00000378821 CFAP126Q5VTH2 177 aa12.95□□□□□ -0.34
TMEM88B-201ENST00000378821 TRBV20OR9-2A0A075B6H5 130 aa12.94□□□□□ -0.34
TMEM88B-201ENST00000378821 ARMS2P0C7Q2 107 aa12.94□□□□□ -0.34
TMEM88B-201ENST00000378821 RBFOX3A6NFN3 312 aa12.93□□□□□ -0.34
TMEM88B-201ENST00000378821 SIVA1O15304 175 aa12.93□□□□□ -0.34
TMEM88B-201ENST00000378821 GNG4P50150 75 aa12.93□□□□□ -0.34
TMEM88B-201ENST00000378821 MRPL23Q16540 153 aaKnown RBP12.93□□□□□ -0.34
TMEM88B-201ENST00000378821 LYPD5Q6UWN5 251 aa12.93□□□□□ -0.34
TMEM88B-201ENST00000378821 Q6ZRN7 208 aaPredicted RBP12.93□□□□□ -0.34
TMEM88B-201ENST00000378821 IGHV3-73A0A0B4J1V6 119 aa12.92□□□□□ -0.34
TMEM88B-201ENST00000378821 MGST1P10620 155 aaKnown RBP12.92□□□□□ -0.34
TMEM88B-201ENST00000378821 GATA1P15976 413 aaPredicted RBP12.92□□□□□ -0.34
TMEM88B-201ENST00000378821 SCRT2Q9NQ03 307 aa12.92□□□□□ -0.34
TMEM88B-201ENST00000378821 NXPH4O95158 308 aa12.91□□□□□ -0.34
TMEM88B-201ENST00000378821 CXCL1P09341 107 aa12.91□□□□□ -0.34
TMEM88B-201ENST00000378821 TOR2AQ5JU69 321 aa12.91□□□□□ -0.34
TMEM88B-201ENST00000378821 PIK3CD-AS1Q5SR53 167 aa12.91□□□□□ -0.34
TMEM88B-201ENST00000378821 DMRTA1Q5VZB9 504 aa12.91□□□□□ -0.34
TMEM88B-201ENST00000378821 SMIM12Q96EX1 92 aa12.91□□□□□ -0.34
TMEM88B-201ENST00000378821 KRTAP4-5Q9BYR2 181 aa12.91□□□□□ -0.34
TMEM88B-201ENST00000378821 PARLQ9H300 379 aa12.91□□□□□ -0.34
TMEM88B-201ENST00000378821 JPT2Q9H910 190 aa12.91□□□□□ -0.34
TMEM88B-201ENST00000378821 HSPG2P98160 4391 aa12.9□□□□□ -0.34
TMEM88B-201ENST00000378821 LOC100131303A0A0U1RQF7 123 aa12.9□□□□□ -0.34
TMEM88B-201ENST00000378821 K7EQD1 137 aa12.9□□□□□ -0.34
TMEM88B-201ENST00000378821 GYPEP15421 78 aa12.9□□□□□ -0.34
TMEM88B-201ENST00000378821 LINC00315P59091 139 aa12.9□□□□□ -0.34
TMEM88B-201ENST00000378821 TEX261Q6UWH6 196 aa12.9□□□□□ -0.34
TMEM88B-201ENST00000378821 NEGR1Q7Z3B1 354 aa12.9□□□□□ -0.34
TMEM88B-201ENST00000378821 SPATA12Q7Z6I5 190 aa12.9□□□□□ -0.34
TMEM88B-201ENST00000378821 PCNPQ8WW12 178 aaKnown RBP12.9□□□□□ -0.34
TMEM88B-201ENST00000378821 PHLDA3Q9Y5J5 127 aa12.9□□□□□ -0.34
TMEM88B-201ENST00000378821 A8MWV9 139 aa12.89□□□□□ -0.35
TMEM88B-201ENST00000378821 SYT8Q8NBV8 401 aa12.89□□□□□ -0.35
TMEM88B-201ENST00000378821 LRP1BQ9NZR2 4599 aa12.89□□□□□ -0.35
TMEM88B-201ENST00000378821 C19orf71A6NCJ1 209 aa12.88□□□□□ -0.35
TMEM88B-201ENST00000378821 TMEM250H0YL14 139 aa12.88□□□□□ -0.35
TMEM88B-201ENST00000378821 M0R381 172 aa12.88□□□□□ -0.35
TMEM88B-201ENST00000378821 CIDEAO60543 219 aa12.88□□□□□ -0.35
TMEM88B-201ENST00000378821 KRTAP10-2P60368 255 aa12.88□□□□□ -0.35
TMEM88B-201ENST00000378821 SLC25A29Q8N8R3 303 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms