RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 MAP1LC3CQ9BXW4 147 aa10.99□□□□□ -0.65
RAB3IP-203ENST00000378809 TMEM160Q9NX00 188 aa10.99□□□□□ -0.65
RAB3IP-203ENST00000378809 TSSC4Q9Y5U2 329 aaPredicted RBP10.99□□□□□ -0.65
RAB3IP-203ENST00000378809 RNASE3P12724 160 aaKnown RBP10.99□□□□□ -0.65
RAB3IP-203ENST00000378809 FXYD7P58549 80 aa10.99□□□□□ -0.65
RAB3IP-203ENST00000378809 C16orf95Q9H693 158 aa10.99□□□□□ -0.65
RAB3IP-203ENST00000378809 LAMTOR2Q9Y2Q5 125 aa10.99□□□□□ -0.65
RAB3IP-203ENST00000378809 NF1P21359 2839 aa10.99□□□□□ -0.65
RAB3IP-203ENST00000378809 SYS1-DBNDD2H3BUS1 97 aa10.98□□□□□ -0.65
RAB3IP-203ENST00000378809 MED14OSP0DP75 135 aa10.98□□□□□ -0.65
RAB3IP-203ENST00000378809 DEFB114Q30KQ6 69 aa10.98□□□□□ -0.65
RAB3IP-203ENST00000378809 CD300EQ496F6 205 aaPredicted RBP10.98□□□□□ -0.65
RAB3IP-203ENST00000378809 C14orf178Q8N769 122 aaPredicted RBP10.98□□□□□ -0.65
RAB3IP-203ENST00000378809 ZNF124Q15973 351 aa10.97□□□□□ -0.65
RAB3IP-203ENST00000378809 SPATA12Q7Z6I5 190 aa10.97□□□□□ -0.65
RAB3IP-203ENST00000378809 OR2K2Q8NGT1 345 aa10.97□□□□□ -0.65
RAB3IP-203ENST00000378809 MTORP42345 2549 aa10.97□□□□□ -0.65
RAB3IP-203ENST00000378809 C20orf202A1L168 122 aa10.97□□□□□ -0.65
RAB3IP-203ENST00000378809 SPATA45Q537H7 98 aa10.97□□□□□ -0.65
RAB3IP-203ENST00000378809 ZNF705AQ6ZN79 300 aaPredicted RBP10.97□□□□□ -0.65
RAB3IP-203ENST00000378809 SCRT2Q9NQ03 307 aa10.97□□□□□ -0.65
RAB3IP-203ENST00000378809 MGPP08493 103 aa10.96□□□□□ -0.65
RAB3IP-203ENST00000378809 FHL3Q13643 280 aa10.96□□□□□ -0.65
RAB3IP-203ENST00000378809 AP1S3Q96PC3 154 aa10.96□□□□□ -0.65
RAB3IP-203ENST00000378809 DPH3P1Q9H4G8 78 aa10.96□□□□□ -0.65
RAB3IP-203ENST00000378809 TRAV2A0A0B4J234 112 aa10.96□□□□□ -0.66
RAB3IP-203ENST00000378809 OR4C46A6NHA9 309 aa10.96□□□□□ -0.66
RAB3IP-203ENST00000378809 C14orf144Q96I85 54 aa10.96□□□□□ -0.66
RAB3IP-203ENST00000378809 MCRIP2Q9BUT9 160 aaKnown RBP10.96□□□□□ -0.66
RAB3IP-203ENST00000378809 NXT2Q9NPJ8 142 aaKnown RBP10.96□□□□□ -0.66
RAB3IP-203ENST00000378809 A0A096LNJ9 63 aa10.95□□□□□ -0.66
RAB3IP-203ENST00000378809 HBDP02042 147 aa10.95□□□□□ -0.66
RAB3IP-203ENST00000378809 HLA-DRB4P13762 266 aa10.95□□□□□ -0.66
RAB3IP-203ENST00000378809 MAJINQ3KP22 176 aa10.95□□□□□ -0.66
RAB3IP-203ENST00000378809 JMJD8Q96S16 334 aa10.95□□□□□ -0.66
RAB3IP-203ENST00000378809 C20orf144Q9BQM9 153 aa10.95□□□□□ -0.66
RAB3IP-203ENST00000378809 NDUFAF3Q9BU61 184 aa10.95□□□□□ -0.66
RAB3IP-203ENST00000378809 ZNF747Q9BV97 191 aa10.95□□□□□ -0.66
RAB3IP-203ENST00000378809 MAP6D1Q9H9H5 199 aa10.95□□□□□ -0.66
RAB3IP-203ENST00000378809 HLA-DRB4X5D2U9 266 aa10.95□□□□□ -0.66
RAB3IP-203ENST00000378809 HIVEP2P31629 2446 aa10.94□□□□□ -0.66
RAB3IP-203ENST00000378809 NOTCH2Q04721 2471 aa10.94□□□□□ -0.66
RAB3IP-203ENST00000378809 IGHV1OR15-1A0A075B7D0 117 aa10.94□□□□□ -0.66
RAB3IP-203ENST00000378809 CRXO43186 299 aaPredicted RBP10.94□□□□□ -0.66
RAB3IP-203ENST00000378809 AMTNQ6UX39 209 aa10.94□□□□□ -0.66
RAB3IP-203ENST00000378809 MRAP2Q96G30 205 aa10.94□□□□□ -0.66
RAB3IP-203ENST00000378809 SMIM17P0DL12 118 aa10.94□□□□□ -0.66
RAB3IP-203ENST00000378809 Q8N1Y9 231 aa10.94□□□□□ -0.66
RAB3IP-203ENST00000378809 NRACQ8N912 160 aa10.94□□□□□ -0.66
RAB3IP-203ENST00000378809 SPAG8Q99932 426 aaPredicted RBP10.94□□□□□ -0.66
RAB3IP-203ENST00000378809 MDFICQ9P1T7 246 aa10.94□□□□□ -0.66
RAB3IP-203ENST00000378809 H3BMM0 161 aa10.93□□□□□ -0.66
RAB3IP-203ENST00000378809 HTN1P15515 57 aa10.93□□□□□ -0.66
RAB3IP-203ENST00000378809 NSUN5P1Q3KNT7 163 aa10.93□□□□□ -0.66
RAB3IP-203ENST00000378809 PET117Q6UWS5 81 aa10.93□□□□□ -0.66
RAB3IP-203ENST00000378809 IGHV3-16A0A0C4DH30 117 aa10.92□□□□□ -0.66
RAB3IP-203ENST00000378809 PMCHL2Q9BQD1 86 aa10.92□□□□□ -0.66
RAB3IP-203ENST00000378809 TRAV9-2A0A087WT02 112 aa10.92□□□□□ -0.66
RAB3IP-203ENST00000378809 INAFM1C9JVW0 142 aa10.92□□□□□ -0.66
RAB3IP-203ENST00000378809 AGRNO00468 2067 aa10.92□□□□□ -0.66
RAB3IP-203ENST00000378809 Q8N8P6 123 aa10.92□□□□□ -0.66
RAB3IP-203ENST00000378809 CBY3A6NI87 242 aa10.91□□□□□ -0.66
RAB3IP-203ENST00000378809 NXPH4O95158 308 aa10.91□□□□□ -0.66
RAB3IP-203ENST00000378809 NDUFA7O95182 113 aa10.91□□□□□ -0.66
RAB3IP-203ENST00000378809 MIEN1Q9BRT3 115 aa10.91□□□□□ -0.66
RAB3IP-203ENST00000378809 JPT2Q9H910 190 aa10.91□□□□□ -0.66
RAB3IP-203ENST00000378809 ZNF256Q9Y2P7 627 aaPredicted RBP10.91□□□□□ -0.66
RAB3IP-203ENST00000378809 SORL1Q92673 2214 aa10.91□□□□□ -0.66
RAB3IP-203ENST00000378809 OTOGQ6ZRI0 2925 aa10.91□□□□□ -0.66
RAB3IP-203ENST00000378809 RBMY1BA6NDE4 496 aaKnown RBP10.91□□□□□ -0.66
RAB3IP-203ENST00000378809 RBMY1EA6NEQ0 496 aaKnown RBP10.91□□□□□ -0.66
RAB3IP-203ENST00000378809 SAP30O75446 220 aa10.91□□□□□ -0.66
RAB3IP-203ENST00000378809 RBMY1DP0C7P1 496 aaKnown RBP10.91□□□□□ -0.66
RAB3IP-203ENST00000378809 C18orf15Q96N68 181 aa10.91□□□□□ -0.66
RAB3IP-203ENST00000378809 A0A087WWL8 130 aa10.9□□□□□ -0.66
RAB3IP-203ENST00000378809 TCAPO15273 167 aa10.9□□□□□ -0.66
RAB3IP-203ENST00000378809 PROK1P58294 105 aa10.9□□□□□ -0.66
RAB3IP-203ENST00000378809 SYT8Q8NBV8 401 aa10.9□□□□□ -0.66
RAB3IP-203ENST00000378809 RPL39LQ96EH5 51 aaKnown RBP10.9□□□□□ -0.66
RAB3IP-203ENST00000378809 TRGV11A0A075B6L2 103 aa10.89□□□□□ -0.67
RAB3IP-203ENST00000378809 TRAV25A0A0B4J276 109 aa10.89□□□□□ -0.67
RAB3IP-203ENST00000378809 RBMY1A1P0DJD3 496 aaKnown RBP10.89□□□□□ -0.67
RAB3IP-203ENST00000378809 RBMY1CP0DJD4 496 aa10.89□□□□□ -0.67
RAB3IP-203ENST00000378809 RBMY1FQ15415 496 aaKnown RBP10.89□□□□□ -0.67
RAB3IP-203ENST00000378809 FAM74A4Q5TZK3 123 aa10.89□□□□□ -0.67
RAB3IP-203ENST00000378809 RASL10AQ92737 203 aa10.89□□□□□ -0.67
RAB3IP-203ENST00000378809 C9orf85Q96MD7 179 aa10.89□□□□□ -0.67
RAB3IP-203ENST00000378809 SETD2Q9BYW2 2564 aaPredicted RBP10.89□□□□□ -0.67
RAB3IP-203ENST00000378809 IGLV2-18A0A075B6J9 118 aa10.89□□□□□ -0.67
RAB3IP-203ENST00000378809 LINC01546A6NGU7 62 aa10.89□□□□□ -0.67
RAB3IP-203ENST00000378809 HSBP1L1C9JCN9 74 aa10.89□□□□□ -0.67
RAB3IP-203ENST00000378809 F5H697 171 aa10.89□□□□□ -0.67
RAB3IP-203ENST00000378809 FCER1GP30273 86 aa10.89□□□□□ -0.67
RAB3IP-203ENST00000378809 TMEM158Q8WZ71 300 aa10.89□□□□□ -0.67
RAB3IP-203ENST00000378809 IFI27L1Q96BM0 104 aa10.89□□□□□ -0.67
RAB3IP-203ENST00000378809 hDV102S1A0JD36 115 aa10.88□□□□□ -0.67
RAB3IP-203ENST00000378809 IGLL1P15814 213 aa10.88□□□□□ -0.67
RAB3IP-203ENST00000378809 SUMO2P61956 95 aaKnown RBP10.88□□□□□ -0.67
RAB3IP-203ENST00000378809 ODF3L2Q3SX64 289 aa10.88□□□□□ -0.67
RAB3IP-203ENST00000378809 LINC01545Q5VT33 79 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms