RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 SCO2A0A1W2PP80 73 aa10.51□□□□□ -0.73
RAB4B-202ENST00000378307 KRBOX1C9JBD0 128 aa10.51□□□□□ -0.73
RAB4B-202ENST00000378307 SH2D1AO60880 128 aa10.51□□□□□ -0.73
RAB4B-202ENST00000378307 LTAP01374 205 aa10.51□□□□□ -0.73
RAB4B-202ENST00000378307 H2AFB1P0C5Y9 115 aa10.51□□□□□ -0.73
RAB4B-202ENST00000378307 NHLRC2Q8NBF2 726 aa10.51□□□□□ -0.73
RAB4B-202ENST00000378307 ZFP30Q9Y2G7 519 aa10.51□□□□□ -0.73
RAB4B-202ENST00000378307 TRBV6-1A0A0K0K1D8 114 aa10.5□□□□□ -0.73
RAB4B-202ENST00000378307 M0R036 132 aa10.5□□□□□ -0.73
RAB4B-202ENST00000378307 SIVA1O15304 175 aa10.5□□□□□ -0.73
RAB4B-202ENST00000378307 ORM1P02763 201 aa10.5□□□□□ -0.73
RAB4B-202ENST00000378307 SRIP30626 198 aa10.5□□□□□ -0.73
RAB4B-202ENST00000378307 UBE2G1P62253 170 aa10.5□□□□□ -0.73
RAB4B-202ENST00000378307 ZNF674Q2M3X9 581 aa10.5□□□□□ -0.73
RAB4B-202ENST00000378307 SLC25A29Q8N8R3 303 aa10.5□□□□□ -0.73
RAB4B-202ENST00000378307 PTH2Q96A98 100 aa10.5□□□□□ -0.73
RAB4B-202ENST00000378307 JPT2Q9H910 190 aa10.5□□□□□ -0.73
RAB4B-202ENST00000378307 A0A1W2PPQ1 181 aa10.49□□□□□ -0.73
RAB4B-202ENST00000378307 GRIFINA4D1Z8 144 aa10.49□□□□□ -0.73
RAB4B-202ENST00000378307 B4DEV8 164 aa10.49□□□□□ -0.73
RAB4B-202ENST00000378307 AKR1C3P42330 323 aa10.49□□□□□ -0.73
RAB4B-202ENST00000378307 EIF5AP63241 154 aaKnown RBP10.49□□□□□ -0.73
RAB4B-202ENST00000378307 Q6ZSN1 163 aa10.49□□□□□ -0.73
RAB4B-202ENST00000378307 WFDC10BQ8IUB3 73 aa10.49□□□□□ -0.73
RAB4B-202ENST00000378307 TCEAL7Q9BRU2 100 aa10.49□□□□□ -0.73
RAB4B-202ENST00000378307 TNFRSF18Q9Y5U5 241 aa10.49□□□□□ -0.73
RAB4B-202ENST00000378307 HSPG2P98160 4391 aa10.49□□□□□ -0.73
RAB4B-202ENST00000378307 H3BVH4 76 aa10.48□□□□□ -0.73
RAB4B-202ENST00000378307 C1QBP02746 253 aa10.48□□□□□ -0.73
RAB4B-202ENST00000378307 S100A4P26447 101 aaKnown RBP10.48□□□□□ -0.73
RAB4B-202ENST00000378307 ASIPP42127 132 aa10.48□□□□□ -0.73
RAB4B-202ENST00000378307 TTC32Q5I0X7 151 aa10.48□□□□□ -0.73
RAB4B-202ENST00000378307 FAM162BQ5T6X4 162 aa10.48□□□□□ -0.73
RAB4B-202ENST00000378307 PCNPQ8WW12 178 aaKnown RBP10.48□□□□□ -0.73
RAB4B-202ENST00000378307 SAMD10Q9BYL1 202 aa10.48□□□□□ -0.73
RAB4B-202ENST00000378307 hCG_2014768A0A024R1R8 64 aa10.47□□□□□ -0.73
RAB4B-202ENST00000378307 TMSB15BA0A087X1C1 80 aa10.47□□□□□ -0.73
RAB4B-202ENST00000378307 ARMS2P0C7Q2 107 aa10.47□□□□□ -0.73
RAB4B-202ENST00000378307 LINC00315P59091 139 aa10.47□□□□□ -0.73
RAB4B-202ENST00000378307 DNLZQ5SXM8 178 aa10.47□□□□□ -0.73
RAB4B-202ENST00000378307 DMRTA1Q5VZB9 504 aa10.47□□□□□ -0.73
RAB4B-202ENST00000378307 PARLQ9H300 379 aa10.47□□□□□ -0.73
RAB4B-202ENST00000378307 IL36BQ9NZH7 164 aa10.47□□□□□ -0.73
RAB4B-202ENST00000378307 Q9UF83 564 aa10.47□□□□□ -0.73
RAB4B-202ENST00000378307 APOBP04114 4563 aaKnown RBP10.46□□□□□ -0.73
RAB4B-202ENST00000378307 SULT1A2P50226 295 aa10.46□□□□□ -0.73
RAB4B-202ENST00000378307 LINC01559Q495D7 138 aa10.46□□□□□ -0.73
RAB4B-202ENST00000378307 UFSP1Q6NVU6 142 aa10.46□□□□□ -0.73
RAB4B-202ENST00000378307 TXNDC17Q9BRA2 123 aa10.46□□□□□ -0.73
RAB4B-202ENST00000378307 MLST8Q9BVC4 326 aa10.46□□□□□ -0.73
RAB4B-202ENST00000378307 TRAV1-1A0A0B4J248 108 aa10.45□□□□□ -0.74
RAB4B-202ENST00000378307 TRBV6-4A0A1B0GX49 114 aa10.45□□□□□ -0.74
RAB4B-202ENST00000378307 RPL19P84098 196 aaKnown RBP10.45□□□□□ -0.74
RAB4B-202ENST00000378307 Q6ZRN7 208 aaPredicted RBP10.45□□□□□ -0.74
RAB4B-202ENST00000378307 DERL1Q9BUN8 251 aa10.45□□□□□ -0.74
RAB4B-202ENST00000378307 SCRT2Q9NQ03 307 aa10.45□□□□□ -0.74
RAB4B-202ENST00000378307 GNG13Q9P2W3 67 aa10.45□□□□□ -0.74
RAB4B-202ENST00000378307 CIDEAO60543 219 aa10.44□□□□□ -0.74
RAB4B-202ENST00000378307 PIK3CD-AS1Q5SR53 167 aa10.44□□□□□ -0.74
RAB4B-202ENST00000378307 BAGE2Q86Y30 109 aa10.44□□□□□ -0.74
RAB4B-202ENST00000378307 RYR1P21817 5038 aa10.44□□□□□ -0.74
RAB4B-202ENST00000378307 A8MWV9 139 aa10.43□□□□□ -0.74
RAB4B-202ENST00000378307 S100A9P06702 114 aaKnown RBP10.43□□□□□ -0.74
RAB4B-202ENST00000378307 RAB5CP51148 216 aa10.43□□□□□ -0.74
RAB4B-202ENST00000378307 RHOHQ15669 191 aa10.43□□□□□ -0.74
RAB4B-202ENST00000378307 SLC51BQ86UW2 128 aa10.43□□□□□ -0.74
RAB4B-202ENST00000378307 C9orf62Q8N4C0 152 aa10.43□□□□□ -0.74
RAB4B-202ENST00000378307 PRADC1Q9BSG0 188 aa10.43□□□□□ -0.74
RAB4B-202ENST00000378307 LY96Q9Y6Y9 160 aa10.43□□□□□ -0.74
RAB4B-202ENST00000378307 DNAH10OSP0CZ25 163 aa10.42□□□□□ -0.74
RAB4B-202ENST00000378307 MGST1P10620 155 aaKnown RBP10.42□□□□□ -0.74
RAB4B-202ENST00000378307 RPL35P42766 123 aaKnown RBP10.42□□□□□ -0.74
RAB4B-202ENST00000378307 ZFP2Q6ZN57 461 aa10.42□□□□□ -0.74
RAB4B-202ENST00000378307 AKAP14Q86UN6 197 aa10.42□□□□□ -0.74
RAB4B-202ENST00000378307 C14orf178Q8N769 122 aaPredicted RBP10.42□□□□□ -0.74
RAB4B-202ENST00000378307 MANBALQ9NQG1 85 aa10.42□□□□□ -0.74
RAB4B-202ENST00000378307 A0A1B0GVG6 124 aa10.41□□□□□ -0.74
RAB4B-202ENST00000378307 IGLV2-8P01709 118 aa10.41□□□□□ -0.74
RAB4B-202ENST00000378307 CRYGDP07320 174 aa10.41□□□□□ -0.74
RAB4B-202ENST00000378307 MED14OSP0DP75 135 aa10.41□□□□□ -0.74
RAB4B-202ENST00000378307 BTF3P20290 206 aaKnown RBP10.41□□□□□ -0.74
RAB4B-202ENST00000378307 TIRAPP58753 221 aa10.41□□□□□ -0.74
RAB4B-202ENST00000378307 KRTAP10-2P60368 255 aa10.41□□□□□ -0.74
RAB4B-202ENST00000378307 EIF5AL1Q6IS14 154 aaKnown RBP10.41□□□□□ -0.74
RAB4B-202ENST00000378307 PRR27Q6MZM9 219 aa10.41□□□□□ -0.74
RAB4B-202ENST00000378307 C11orf52Q96A22 123 aa10.41□□□□□ -0.74
RAB4B-202ENST00000378307 PHLDA3Q9Y5J5 127 aa10.41□□□□□ -0.74
RAB4B-202ENST00000378307 A0A087WWL8 130 aa10.4□□□□□ -0.74
RAB4B-202ENST00000378307 GAGE12JA6NER3 117 aa10.4□□□□□ -0.74
RAB4B-202ENST00000378307 M0R381 172 aa10.4□□□□□ -0.74
RAB4B-202ENST00000378307 LINC00694P0DN24 101 aa10.4□□□□□ -0.74
RAB4B-202ENST00000378307 GAGE1Q13065 139 aa10.4□□□□□ -0.74
RAB4B-202ENST00000378307 GAGE4Q13068 117 aa10.4□□□□□ -0.74
RAB4B-202ENST00000378307 GAGE5Q13069 117 aa10.4□□□□□ -0.74
RAB4B-202ENST00000378307 GAGE13Q4V321 117 aa10.4□□□□□ -0.74
RAB4B-202ENST00000378307 SH2D6Q7Z4S9 175 aa10.4□□□□□ -0.74
RAB4B-202ENST00000378307 SPATA12Q7Z6I5 190 aa10.4□□□□□ -0.74
RAB4B-202ENST00000378307 SFRP2Q96HF1 295 aa10.4□□□□□ -0.74
RAB4B-202ENST00000378307 RAB19A4D1S5 217 aa10.39□□□□□ -0.75
RAB4B-202ENST00000378307 FAM74A4Q5TZK3 123 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms