RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 LINC01549A6NIU2 74 aa10.22□□□□□ -0.77
NPHP4-203ENST00000378169 A0A087WX48 190 aa10.21□□□□□ -0.77
NPHP4-203ENST00000378169 LINC00322Q6ZN03 302 aaPredicted RBP10.21□□□□□ -0.77
NPHP4-203ENST00000378169 DKK2Q9UBU2 259 aa10.21□□□□□ -0.77
NPHP4-203ENST00000378169 KLF12Q9Y4X4 402 aa10.21□□□□□ -0.77
NPHP4-203ENST00000378169 ATG2AQ2TAZ0 1938 aa10.21□□□□□ -0.78
NPHP4-203ENST00000378169 COPS9Q8WXC6 57 aa10.21□□□□□ -0.78
NPHP4-203ENST00000378169 ZNF625Q96I27 306 aaPredicted RBP10.21□□□□□ -0.78
NPHP4-203ENST00000378169 CHAC1Q9BUX1 264 aa10.21□□□□□ -0.78
NPHP4-203ENST00000378169 C11orf68Q9H3H3 251 aaKnown RBP10.21□□□□□ -0.78
NPHP4-203ENST00000378169 TRPT1Q86TN4 253 aaKnown RBP10.21□□□□□ -0.78
NPHP4-203ENST00000378169 MRPS16Q9Y3D3 137 aaKnown RBP10.21□□□□□ -0.78
NPHP4-203ENST00000378169 MGAQ8IWI9 3026 aa10.2□□□□□ -0.78
NPHP4-203ENST00000378169 H3BUA1 57 aa10.2□□□□□ -0.78
NPHP4-203ENST00000378169 ZNF747Q9BV97 191 aa10.2□□□□□ -0.78
NPHP4-203ENST00000378169 TRBV7-9A0A0J9YWB2 115 aa10.2□□□□□ -0.78
NPHP4-203ENST00000378169 GAGE12JA6NER3 117 aa10.2□□□□□ -0.78
NPHP4-203ENST00000378169 GAGE1Q13065 139 aa10.2□□□□□ -0.78
NPHP4-203ENST00000378169 GAGE4Q13068 117 aa10.2□□□□□ -0.78
NPHP4-203ENST00000378169 GAGE5Q13069 117 aa10.2□□□□□ -0.78
NPHP4-203ENST00000378169 GAGE13Q4V321 117 aa10.2□□□□□ -0.78
NPHP4-203ENST00000378169 C1QTNF4Q9BXJ3 329 aa10.2□□□□□ -0.78
NPHP4-203ENST00000378169 FLNBO75369 2602 aaKnown RBP10.2□□□□□ -0.78
NPHP4-203ENST00000378169 OR5A1Q8NGJ0 315 aa10.2□□□□□ -0.78
NPHP4-203ENST00000378169 PRADC1Q9BSG0 188 aa10.2□□□□□ -0.78
NPHP4-203ENST00000378169 ESDP10768 282 aa10.19□□□□□ -0.78
NPHP4-203ENST00000378169 CMC4P56277 68 aaPredicted RBP10.19□□□□□ -0.78
NPHP4-203ENST00000378169 LGALS1P09382 135 aaKnown RBP10.19□□□□□ -0.78
NPHP4-203ENST00000378169 APRG1Q8IVJ8 170 aa10.19□□□□□ -0.78
NPHP4-203ENST00000378169 GAGE12BA1L429 117 aa10.18□□□□□ -0.78
NPHP4-203ENST00000378169 ODF3BA8MYP8 253 aa10.18□□□□□ -0.78
NPHP4-203ENST00000378169 GAGE7O76087 117 aa10.18□□□□□ -0.78
NPHP4-203ENST00000378169 GAGE12FP0CL80 117 aa10.18□□□□□ -0.78
NPHP4-203ENST00000378169 GAGE12GP0CL81 117 aa10.18□□□□□ -0.78
NPHP4-203ENST00000378169 GAGE12IP0CL82 117 aa10.18□□□□□ -0.78
NPHP4-203ENST00000378169 ZNF124Q15973 351 aa10.18□□□□□ -0.78
NPHP4-203ENST00000378169 FRYLO94915 3013 aa10.18□□□□□ -0.78
NPHP4-203ENST00000378169 MALP21145 153 aa10.18□□□□□ -0.78
NPHP4-203ENST00000378169 RNF114Q9Y508 228 aa10.18□□□□□ -0.78
NPHP4-203ENST00000378169 C16orf54Q6UWD8 224 aa10.18□□□□□ -0.78
NPHP4-203ENST00000378169 IGLV2-8P01709 118 aa10.18□□□□□ -0.78
NPHP4-203ENST00000378169 IGHG2P01859 326 aa10.18□□□□□ -0.78
NPHP4-203ENST00000378169 ZNRF2Q8NHG8 242 aa10.18□□□□□ -0.78
NPHP4-203ENST00000378169 ATP6V0BQ99437 205 aa10.18□□□□□ -0.78
NPHP4-203ENST00000378169 PRORYQ9H606 182 aa10.18□□□□□ -0.78
NPHP4-203ENST00000378169 CFAP161Q6P656 301 aa10.17□□□□□ -0.78
NPHP4-203ENST00000378169 LGALS9BQ3B8N2 356 aa10.17□□□□□ -0.78
NPHP4-203ENST00000378169 RNASE13Q5GAN3 156 aaKnown RBP10.17□□□□□ -0.78
NPHP4-203ENST00000378169 LGALS9CQ6DKI2 356 aa10.17□□□□□ -0.78
NPHP4-203ENST00000378169 Q6ZVH6 145 aa10.17□□□□□ -0.78
NPHP4-203ENST00000378169 KLF5Q13887 457 aaPredicted RBP10.17□□□□□ -0.78
NPHP4-203ENST00000378169 RPL39LQ96EH5 51 aaKnown RBP10.17□□□□□ -0.78
NPHP4-203ENST00000378169 RBAKDNA6NC62 111 aa10.16□□□□□ -0.78
NPHP4-203ENST00000378169 LINC00158P58513 81 aa10.16□□□□□ -0.78
NPHP4-203ENST00000378169 CCDC140Q96MF4 163 aa10.16□□□□□ -0.78
NPHP4-203ENST00000378169 CENPEQ02224 2701 aa10.16□□□□□ -0.78
NPHP4-203ENST00000378169 IGHV4OR15-8A0A075B7B6 117 aa10.16□□□□□ -0.78
NPHP4-203ENST00000378169 A0A087WW49 117 aa10.16□□□□□ -0.78
NPHP4-203ENST00000378169 AZU1P20160 251 aa10.16□□□□□ -0.78
NPHP4-203ENST00000378169 LENEPQ9Y5L5 61 aa10.16□□□□□ -0.78
NPHP4-203ENST00000378169 TMEM238C9JI98 176 aa10.16□□□□□ -0.78
NPHP4-203ENST00000378169 RHODO00212 210 aa10.16□□□□□ -0.78
NPHP4-203ENST00000378169 CD5LO43866 347 aa10.16□□□□□ -0.78
NPHP4-203ENST00000378169 TIMM21Q9BVV7 248 aa10.16□□□□□ -0.78
NPHP4-203ENST00000378169 ERG28Q9UKR5 140 aa10.16□□□□□ -0.78
NPHP4-203ENST00000378169 PLEKHB2Q96CS7 222 aa10.15□□□□□ -0.78
NPHP4-203ENST00000378169 MRPL53Q96EL3 112 aaKnown RBP10.15□□□□□ -0.78
NPHP4-203ENST00000378169 COX11Q9Y6N1 276 aa10.15□□□□□ -0.78
NPHP4-203ENST00000378169 TNRC18O15417 2968 aaPredicted RBP10.15□□□□□ -0.78
NPHP4-203ENST00000378169 EXPH5Q8NEV8 1989 aa10.15□□□□□ -0.78
NPHP4-203ENST00000378169 A8MWV9 139 aa10.15□□□□□ -0.78
NPHP4-203ENST00000378169 COX8AP10176 69 aa10.15□□□□□ -0.78
NPHP4-203ENST00000378169 UBE2V1Q13404 147 aa10.15□□□□□ -0.78
NPHP4-203ENST00000378169 PGPEP1Q9NXJ5 209 aa10.15□□□□□ -0.78
NPHP4-203ENST00000378169 CPAMD8Q8IZJ3 1885 aa10.15□□□□□ -0.78
NPHP4-203ENST00000378169 F8VRH5 84 aa10.15□□□□□ -0.78
NPHP4-203ENST00000378169 CCL24O00175 119 aa10.15□□□□□ -0.78
NPHP4-203ENST00000378169 PMVKQ15126 192 aa10.15□□□□□ -0.78
NPHP4-203ENST00000378169 I3L3M4 83 aa10.15□□□□□ -0.79
NPHP4-203ENST00000378169 PAX2Q02962 417 aa10.15□□□□□ -0.79
NPHP4-203ENST00000378169 MYO15AQ9UKN7 3530 aa10.14□□□□□ -0.79
NPHP4-203ENST00000378169 ZNF80P51504 273 aaPredicted RBP10.14□□□□□ -0.79
NPHP4-203ENST00000378169 C19orf71A6NCJ1 209 aa10.14□□□□□ -0.79
NPHP4-203ENST00000378169 CRYGBP07316 175 aa10.14□□□□□ -0.79
NPHP4-203ENST00000378169 PRIMA1Q86XR5 153 aa10.14□□□□□ -0.79
NPHP4-203ENST00000378169 PCP2Q8IVA1 136 aa10.14□□□□□ -0.79
NPHP4-203ENST00000378169 C11orf71Q6IPW1 123 aa10.14□□□□□ -0.79
NPHP4-203ENST00000378169 FOXI2Q6ZQN5 318 aa10.14□□□□□ -0.79
NPHP4-203ENST00000378169 MTURNQ8N3F0 131 aa10.13□□□□□ -0.79
NPHP4-203ENST00000378169 LY6LH3BQJ8 138 aa10.13□□□□□ -0.79
NPHP4-203ENST00000378169 MORN3Q6PF18 240 aaPredicted RBP10.13□□□□□ -0.79
NPHP4-203ENST00000378169 NPSP0C0P6 89 aa10.13□□□□□ -0.79
NPHP4-203ENST00000378169 DPH3Q96FX2 82 aa10.12□□□□□ -0.79
NPHP4-203ENST00000378169 TRAV8-2A0A0B4J237 113 aa10.12□□□□□ -0.79
NPHP4-203ENST00000378169 KIR2DL5BA0A0G2JN68 375 aa10.12□□□□□ -0.79
NPHP4-203ENST00000378169 KIR2DL5BA0A0G2JPC4 375 aa10.12□□□□□ -0.79
NPHP4-203ENST00000378169 M0R2P5 195 aa10.12□□□□□ -0.79
NPHP4-203ENST00000378169 KIR2DL5AQ8N109 375 aa10.12□□□□□ -0.79
NPHP4-203ENST00000378169 C3orf56Q8N813 242 aa10.12□□□□□ -0.79
NPHP4-203ENST00000378169 TTTY13Q9BZ97 58 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms