RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 EGR2P11161 476 aaPredicted RBP6.6□□□□□ -1.35
VPS36-201ENST00000378060 SYNJ2BPP57105 145 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 DEFB131AP59861 70 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 PATE2Q6UY27 113 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 DEFB104AQ8WTQ1 72 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 UBE2WQ96B02 151 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 GAGE12HA6NDE8 117 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 IGKV1-17P01599 117 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 MSMBP08118 114 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 C12orf74Q32Q52 190 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 HLA-DMBP28068 263 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 AGPAT4-IT1Q9H0P7 198 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 H3BUA1 57 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 J3QQQ9 107 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 CR1LQ2VPA4 569 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 TDRG1Q3Y452 100 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 LINC01356Q8N9X3 169 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 C17orf77Q96MU5 243 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 CTSZQ9UBR2 303 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 CCL25O15444 150 aa6.59□□□□□ -1.35
VPS36-201ENST00000378060 KMT2BQ9UMN6 2715 aaPredicted RBP6.59□□□□□ -1.35
VPS36-201ENST00000378060 ARHGAP21Q5T5U3 1957 aa6.59□□□□□ -1.35
VPS36-201ENST00000378060 TRAV26-2A0A0B4J265 109 aa6.59□□□□□ -1.35
VPS36-201ENST00000378060 H3BMG7 143 aa6.59□□□□□ -1.35
VPS36-201ENST00000378060 IGLV2-14P01704 120 aa6.59□□□□□ -1.35
VPS36-201ENST00000378060 FGF6P10767 208 aa6.59□□□□□ -1.35
VPS36-201ENST00000378060 SPINK13Q1W4C9 94 aa6.59□□□□□ -1.35
VPS36-201ENST00000378060 NDUFA12Q9UI09 145 aa6.59□□□□□ -1.35
VPS36-201ENST00000378060 MYO18BQ8IUG5 2567 aa6.59□□□□□ -1.35
VPS36-201ENST00000378060 I3L2K1 104 aa6.59□□□□□ -1.36
VPS36-201ENST00000378060 P0C879 139 aa6.59□□□□□ -1.36
VPS36-201ENST00000378060 LCNL1Q6ZST4 164 aa6.59□□□□□ -1.36
VPS36-201ENST00000378060 PHLDA1Q8WV24 401 aaPredicted RBP6.59□□□□□ -1.36
VPS36-201ENST00000378060 LRBAP50851 2863 aa6.59□□□□□ -1.36
VPS36-201ENST00000378060 SAP30O75446 220 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 DYNAPQ8N1N2 210 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 C11orf68Q9H3H3 251 aaKnown RBP6.58□□□□□ -1.36
VPS36-201ENST00000378060 PRSS29PA6NIE9 313 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 K7EIM0 57 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 RHOHQ15669 191 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 TRBV25-1A0A075B6N4 114 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 C22orf46C9J442 243 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 ASPHD1Q5U4P2 390 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 CRYBG3Q68DQ2 2970 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 Q8NA96 180 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 KLHL30-AS1Q8NEE0 82 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 IGFBPL1Q8WX77 278 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 DYSFO75923 2080 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 IGHV7-4-1A0A0J9YVY3 117 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 SS18Q15532 418 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 MORN5Q5VZ52 161 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 PCP2Q8IVA1 136 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 ATP6V0BQ99437 205 aa6.58□□□□□ -1.36
VPS36-201ENST00000378060 TRBV6-1A0A0K0K1D8 114 aa6.57□□□□□ -1.36
VPS36-201ENST00000378060 GNLYP22749 145 aa6.57□□□□□ -1.36
VPS36-201ENST00000378060 UBE2E2Q96LR5 201 aa6.57□□□□□ -1.36
VPS36-201ENST00000378060 PRORYQ9H606 182 aa6.57□□□□□ -1.36
VPS36-201ENST00000378060 SCRT2Q9NQ03 307 aa6.57□□□□□ -1.36
VPS36-201ENST00000378060 HIGD1BQ9P298 99 aa6.57□□□□□ -1.36
VPS36-201ENST00000378060 DCHS2Q6V1P9 2916 aa6.57□□□□□ -1.36
VPS36-201ENST00000378060 SONP18583 2426 aaKnown RBP6.57□□□□□ -1.36
VPS36-201ENST00000378060 IGHV3-53P01767 116 aa6.57□□□□□ -1.36
VPS36-201ENST00000378060 UTF1Q5T230 341 aa6.57□□□□□ -1.36
VPS36-201ENST00000378060 RUSC1-AS1Q66K80 236 aa6.57□□□□□ -1.36
VPS36-201ENST00000378060 C11orf44Q8N8P7 122 aa6.57□□□□□ -1.36
VPS36-201ENST00000378060 NPBQ8NG41 125 aa6.57□□□□□ -1.36
VPS36-201ENST00000378060 IGKV1OR2-108A0A075B7D4 117 aa6.57□□□□□ -1.36
VPS36-201ENST00000378060 HIST1H4AP62805 103 aaKnown RBP6.57□□□□□ -1.36
VPS36-201ENST00000378060 ANKRD39Q53RE8 183 aa6.57□□□□□ -1.36
VPS36-201ENST00000378060 LAMTOR3Q9UHA4 124 aa6.57□□□□□ -1.36
VPS36-201ENST00000378060 IGLV11-55A0A075B6I3 123 aa6.56□□□□□ -1.36
VPS36-201ENST00000378060 KNCNA6PVL3 124 aa6.56□□□□□ -1.36
VPS36-201ENST00000378060 PRB1P04280 392 aa6.56□□□□□ -1.36
VPS36-201ENST00000378060 TENM4Q6N022 2769 aa6.56□□□□□ -1.36
VPS36-201ENST00000378060 NACAE9PAV3 2078 aa6.56□□□□□ -1.36
VPS36-201ENST00000378060 GAGE2AQ6NT46 116 aa6.56□□□□□ -1.36
VPS36-201ENST00000378060 DPH3Q96FX2 82 aa6.56□□□□□ -1.36
VPS36-201ENST00000378060 K7ERJ3 54 aa6.56□□□□□ -1.36
VPS36-201ENST00000378060 AMTNQ6UX39 209 aa6.56□□□□□ -1.36
VPS36-201ENST00000378060 AZU1P20160 251 aa6.56□□□□□ -1.36
VPS36-201ENST00000378060 LINC00173Q6ZV60 143 aa6.56□□□□□ -1.36
VPS36-201ENST00000378060 Q6ZVH6 145 aa6.56□□□□□ -1.36
VPS36-201ENST00000378060 GTSF1Q8WW33 167 aa6.56□□□□□ -1.36
VPS36-201ENST00000378060 ZNF462Q96JM2 2506 aa6.55□□□□□ -1.36
VPS36-201ENST00000378060 SOCS3O14543 225 aa6.55□□□□□ -1.36
VPS36-201ENST00000378060 ELANEP08246 267 aa6.55□□□□□ -1.36
VPS36-201ENST00000378060 TCTEX1D4Q5JR98 221 aa6.55□□□□□ -1.36
VPS36-201ENST00000378060 CFHR4Q92496 578 aa6.55□□□□□ -1.36
VPS36-201ENST00000378060 ZNF625Q96I27 306 aaPredicted RBP6.55□□□□□ -1.36
VPS36-201ENST00000378060 KLK9Q9UKQ9 250 aa6.55□□□□□ -1.36
VPS36-201ENST00000378060 MED12LQ86YW9 2145 aa6.55□□□□□ -1.36
VPS36-201ENST00000378060 CFC1BP0CG36 223 aa6.55□□□□□ -1.36
VPS36-201ENST00000378060 CFC1P0CG37 223 aa6.55□□□□□ -1.36
VPS36-201ENST00000378060 IGLL5B9A064 214 aa6.55□□□□□ -1.36
VPS36-201ENST00000378060 CRYGCP07315 174 aa6.55□□□□□ -1.36
VPS36-201ENST00000378060 HERVK_113P63121 156 aa6.55□□□□□ -1.36
VPS36-201ENST00000378060 PLXNB1O43157 2135 aa6.55□□□□□ -1.36
VPS36-201ENST00000378060 PTPN13Q12923 2485 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 TACC2O95359 2948 aa6.54□□□□□ -1.36
VPS36-201ENST00000378060 LINC01619G3V211 115 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms