RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 ZGRF1Q86YA3 2104 aa11.95□□□□□ -0.5
CSNK1A1-202ENST00000377843 CENPVL3A0A0U1RRI6 287 aa11.95□□□□□ -0.5
CSNK1A1-202ENST00000377843 SUMO2P61956 95 aaKnown RBP11.95□□□□□ -0.5
CSNK1A1-202ENST00000377843 DEFB104AQ8WTQ1 72 aa11.95□□□□□ -0.5
CSNK1A1-202ENST00000377843 NBASA2RRP1 2371 aa11.94□□□□□ -0.5
CSNK1A1-202ENST00000377843 TIMM23O14925 209 aa11.94□□□□□ -0.5
CSNK1A1-202ENST00000377843 TNFRSF18Q9Y5U5 241 aa11.94□□□□□ -0.5
CSNK1A1-202ENST00000377843 TEX49A0A1B0GTD5 131 aa11.93□□□□□ -0.5
CSNK1A1-202ENST00000377843 TSHBP01222 138 aa11.93□□□□□ -0.5
CSNK1A1-202ENST00000377843 C1orf122Q6ZSJ8 110 aa11.93□□□□□ -0.5
CSNK1A1-202ENST00000377843 C21orf62Q9NYP8 219 aa11.93□□□□□ -0.5
CSNK1A1-202ENST00000377843 FAM215AQ9Y5M1 114 aa11.93□□□□□ -0.5
CSNK1A1-202ENST00000377843 IGHV4-4A0A075B6R2 117 aa11.93□□□□□ -0.5
CSNK1A1-202ENST00000377843 IGHV3-66A0A0C4DH42 116 aa11.93□□□□□ -0.5
CSNK1A1-202ENST00000377843 DUSP14O95147 198 aaKnown RBP11.93□□□□□ -0.5
CSNK1A1-202ENST00000377843 CTSGP08311 255 aa11.93□□□□□ -0.5
CSNK1A1-202ENST00000377843 C3orf56Q8N813 242 aa11.93□□□□□ -0.5
CSNK1A1-202ENST00000377843 SLC25A29Q8N8R3 303 aa11.93□□□□□ -0.5
CSNK1A1-202ENST00000377843 H7C2G1 150 aa11.92□□□□□ -0.5
CSNK1A1-202ENST00000377843 C14orf178Q8N769 122 aaPredicted RBP11.92□□□□□ -0.5
CSNK1A1-202ENST00000377843 C15orf53Q8NAA6 179 aa11.92□□□□□ -0.5
CSNK1A1-202ENST00000377843 AMELXQ99217 191 aa11.92□□□□□ -0.5
CSNK1A1-202ENST00000377843 PTPRQQ9UMZ3 2332 aa11.92□□□□□ -0.5
CSNK1A1-202ENST00000377843 NDPQ00604 133 aa11.92□□□□□ -0.5
CSNK1A1-202ENST00000377843 Q6Q795 121 aa11.92□□□□□ -0.5
CSNK1A1-202ENST00000377843 NUP37Q8NFH4 326 aa11.92□□□□□ -0.5
CSNK1A1-202ENST00000377843 SLC50A1Q9BRV3 221 aa11.92□□□□□ -0.5
CSNK1A1-202ENST00000377843 TPRP12270 2363 aaKnown RBP11.91□□□□□ -0.5
CSNK1A1-202ENST00000377843 M0QXV9 152 aa11.91□□□□□ -0.5
CSNK1A1-202ENST00000377843 IGHV3-33P01772 117 aa11.91□□□□□ -0.5
CSNK1A1-202ENST00000377843 PRR9Q5T870 116 aa11.91□□□□□ -0.5
CSNK1A1-202ENST00000377843 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.91□□□□□ -0.5
CSNK1A1-202ENST00000377843 A4D1N5 150 aa11.91□□□□□ -0.5
CSNK1A1-202ENST00000377843 LY6LH3BQJ8 138 aa11.91□□□□□ -0.5
CSNK1A1-202ENST00000377843 KAAG1Q9UBP8 84 aa11.9□□□□□ -0.5
CSNK1A1-202ENST00000377843 PCNX1Q96RV3 2341 aa11.9□□□□□ -0.5
CSNK1A1-202ENST00000377843 IGHV3OR16-13A0A075B7E8 117 aa11.9□□□□□ -0.5
CSNK1A1-202ENST00000377843 IGHV3-74A0A0B4J1X5 117 aa11.9□□□□□ -0.5
CSNK1A1-202ENST00000377843 MEIG1Q5JSS6 88 aa11.9□□□□□ -0.5
CSNK1A1-202ENST00000377843 HIF1ANQ9NWT6 349 aa11.9□□□□□ -0.5
CSNK1A1-202ENST00000377843 M0R381 172 aa11.89□□□□□ -0.51
CSNK1A1-202ENST00000377843 NBR2O15453 112 aa11.89□□□□□ -0.51
CSNK1A1-202ENST00000377843 TMEM263Q8WUH6 116 aaKnown RBP11.89□□□□□ -0.51
CSNK1A1-202ENST00000377843 TRAV17A0A0B4J275 112 aa11.89□□□□□ -0.51
CSNK1A1-202ENST00000377843 IGF1P05019 195 aa11.89□□□□□ -0.51
CSNK1A1-202ENST00000377843 IGF2-ASQ6U949 168 aa11.89□□□□□ -0.51
CSNK1A1-202ENST00000377843 TIMD4Q96H15 378 aa11.89□□□□□ -0.51
CSNK1A1-202ENST00000377843 TRAV8-4A0A0B4J246 113 aa11.88□□□□□ -0.51
CSNK1A1-202ENST00000377843 RBAKDNA6NC62 111 aa11.88□□□□□ -0.51
CSNK1A1-202ENST00000377843 IGFL2Q6UWQ7 119 aa11.88□□□□□ -0.51
CSNK1A1-202ENST00000377843 RNF5Q99942 180 aa11.88□□□□□ -0.51
CSNK1A1-202ENST00000377843 PIEZO1Q92508 2521 aa11.88□□□□□ -0.51
CSNK1A1-202ENST00000377843 IGHV4-39P01824 125 aa11.87□□□□□ -0.51
CSNK1A1-202ENST00000377843 LINC01620Q4KN68 170 aa11.87□□□□□ -0.51
CSNK1A1-202ENST00000377843 ZNRF2Q8NHG8 242 aa11.87□□□□□ -0.51
CSNK1A1-202ENST00000377843 FAM57AQ8TBR7 257 aa11.87□□□□□ -0.51
CSNK1A1-202ENST00000377843 PPDPFQ9H3Y8 114 aa11.87□□□□□ -0.51
CSNK1A1-202ENST00000377843 MDFICQ9P1T7 246 aa11.87□□□□□ -0.51
CSNK1A1-202ENST00000377843 J3KRW8 73 aa11.87□□□□□ -0.51
CSNK1A1-202ENST00000377843 CHCHD5Q9BSY4 110 aa11.86□□□□□ -0.51
CSNK1A1-202ENST00000377843 VPREB3Q9UKI3 123 aa11.86□□□□□ -0.51
CSNK1A1-202ENST00000377843 IGHV3-49A0A0A0MS15 119 aa11.86□□□□□ -0.51
CSNK1A1-202ENST00000377843 BUB3O43684 328 aa11.86□□□□□ -0.51
CSNK1A1-202ENST00000377843 MGPP08493 103 aa11.86□□□□□ -0.51
CSNK1A1-202ENST00000377843 PRR30Q53SZ7 412 aaPredicted RBP11.86□□□□□ -0.51
CSNK1A1-202ENST00000377843 LYNX1G3V0Z9 82 aa11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 LYNX1P0DP58 116 aa11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 RPL13AP40429 203 aaKnown RBP11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 HERVK_113P61574 105 aa11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 RPL39P62891 51 aaKnown RBP11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 BSPH1Q075Z2 132 aa11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 TMEM170BQ5T4T1 132 aa11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 GPHB5Q86YW7 130 aa11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 TP53TG1Q9Y2A0 90 aa11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 COL12A1Q99715 3063 aa11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 IGIPA6NJ69 53 aa11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 SCGB2A1O75556 95 aa11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 P0DMU3 169 aa11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 FAM231AP0DMU4 169 aa11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 FAM231CP0DMU5 169 aa11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 OR10J6PQ8NGY7 276 aa11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 BEX4Q9NWD9 120 aaPredicted RBP11.85□□□□□ -0.51
CSNK1A1-202ENST00000377843 LINC01587Q99440 93 aa11.84□□□□□ -0.51
CSNK1A1-202ENST00000377843 WNK2Q9Y3S1 2297 aa11.84□□□□□ -0.51
CSNK1A1-202ENST00000377843 J3QQQ9 107 aa11.84□□□□□ -0.51
CSNK1A1-202ENST00000377843 NPBQ8NG41 125 aa11.84□□□□□ -0.51
CSNK1A1-202ENST00000377843 ZFAND3Q9H8U3 227 aa11.84□□□□□ -0.51
CSNK1A1-202ENST00000377843 SVEP1Q4LDE5 3571 aa11.84□□□□□ -0.51
CSNK1A1-202ENST00000377843 TRAV2A0A0B4J234 112 aa11.83□□□□□ -0.52
CSNK1A1-202ENST00000377843 CLPSL1A2RUU4 121 aa11.83□□□□□ -0.52
CSNK1A1-202ENST00000377843 LGALS9O00182 355 aa11.83□□□□□ -0.52
CSNK1A1-202ENST00000377843 CLEC3BP05452 202 aa11.83□□□□□ -0.52
CSNK1A1-202ENST00000377843 ID1P41134 155 aa11.83□□□□□ -0.52
CSNK1A1-202ENST00000377843 MUSTN1Q8IVN3 82 aa11.83□□□□□ -0.52
CSNK1A1-202ENST00000377843 HES1Q14469 280 aa11.83□□□□□ -0.52
CSNK1A1-202ENST00000377843 RNASE6Q93091 150 aaKnown RBP11.83□□□□□ -0.52
CSNK1A1-202ENST00000377843 DPH3P1Q9H4G8 78 aa11.83□□□□□ -0.52
CSNK1A1-202ENST00000377843 POLEQ07864 2286 aa11.82□□□□□ -0.52
CSNK1A1-202ENST00000377843 PMVKQ15126 192 aa11.82□□□□□ -0.52
CSNK1A1-202ENST00000377843 ATXN8Q156A1 80 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms