RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 CEND1Q8N111 149 aa9.37□□□□□ -0.91
TNFSF13B-201ENST00000375887 IGHV1-69DA0A0B4J2H0 117 aa9.37□□□□□ -0.91
TNFSF13B-201ENST00000375887 IGHV1-69P01742 117 aa9.37□□□□□ -0.91
TNFSF13B-201ENST00000375887 IGHV4-38-2P0DP08 117 aa9.37□□□□□ -0.91
TNFSF13B-201ENST00000375887 MRAP2Q96G30 205 aa9.37□□□□□ -0.91
TNFSF13B-201ENST00000375887 LINC00477Q96M19 166 aa9.37□□□□□ -0.91
TNFSF13B-201ENST00000375887 LENEPQ9Y5L5 61 aa9.37□□□□□ -0.91
TNFSF13B-201ENST00000375887 SORL1Q92673 2214 aa9.36□□□□□ -0.91
TNFSF13B-201ENST00000375887 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.36□□□□□ -0.91
TNFSF13B-201ENST00000375887 GNLYP22749 145 aa9.36□□□□□ -0.91
TNFSF13B-201ENST00000375887 RNASE4P34096 147 aaKnown RBP9.36□□□□□ -0.91
TNFSF13B-201ENST00000375887 CRIP2P52943 208 aaPredicted RBP9.36□□□□□ -0.91
TNFSF13B-201ENST00000375887 SUMO2P61956 95 aaKnown RBP9.36□□□□□ -0.91
TNFSF13B-201ENST00000375887 BLCAPP62952 87 aa9.36□□□□□ -0.91
TNFSF13B-201ENST00000375887 IGHV4-61A0A0C4DH41 118 aa9.36□□□□□ -0.91
TNFSF13B-201ENST00000375887 OR10J6PQ8NGY7 276 aa9.36□□□□□ -0.91
TNFSF13B-201ENST00000375887 TSSC4Q9Y5U2 329 aaPredicted RBP9.36□□□□□ -0.91
TNFSF13B-201ENST00000375887 TRAV21A0A0B4J279 112 aa9.35□□□□□ -0.91
TNFSF13B-201ENST00000375887 NDUFA4O00483 81 aa9.35□□□□□ -0.91
TNFSF13B-201ENST00000375887 S100A4P26447 101 aaKnown RBP9.35□□□□□ -0.91
TNFSF13B-201ENST00000375887 RNASE3P12724 160 aaKnown RBP9.35□□□□□ -0.91
TNFSF13B-201ENST00000375887 SCGB2A2Q13296 93 aa9.35□□□□□ -0.91
TNFSF13B-201ENST00000375887 FAM19A4Q96LR4 140 aa9.35□□□□□ -0.91
TNFSF13B-201ENST00000375887 SCGB3A1Q96QR1 104 aa9.35□□□□□ -0.91
TNFSF13B-201ENST00000375887 PHLDA3Q9Y5J5 127 aa9.35□□□□□ -0.91
TNFSF13B-201ENST00000375887 DOPEY2Q9Y3R5 2298 aa9.35□□□□□ -0.91
TNFSF13B-201ENST00000375887 CREBBPQ92793 2442 aa9.35□□□□□ -0.91
TNFSF13B-201ENST00000375887 F8VRH5 84 aa9.34□□□□□ -0.91
TNFSF13B-201ENST00000375887 HLA-DRB4P13762 266 aa9.34□□□□□ -0.91
TNFSF13B-201ENST00000375887 TOMM6Q96B49 74 aa9.34□□□□□ -0.91
TNFSF13B-201ENST00000375887 HLA-DRB4X5D2U9 266 aa9.34□□□□□ -0.91
TNFSF13B-201ENST00000375887 POLQO75417 2590 aa9.34□□□□□ -0.91
TNFSF13B-201ENST00000375887 F8W1H4 67 aa9.34□□□□□ -0.91
TNFSF13B-201ENST00000375887 H7C1H1 209 aa9.34□□□□□ -0.91
TNFSF13B-201ENST00000375887 PLNP26678 52 aa9.34□□□□□ -0.91
TNFSF13B-201ENST00000375887 ASIPP42127 132 aa9.34□□□□□ -0.91
TNFSF13B-201ENST00000375887 TMEM95Q3KNT9 176 aa9.34□□□□□ -0.91
TNFSF13B-201ENST00000375887 NEXN-AS1Q8NBZ9 246 aa9.34□□□□□ -0.91
TNFSF13B-201ENST00000375887 DPH3P1Q9H4G8 78 aa9.34□□□□□ -0.91
TNFSF13B-201ENST00000375887 USP9YO00507 2555 aaPredicted RBP9.33□□□□□ -0.92
TNFSF13B-201ENST00000375887 OVOL1O14753 267 aa9.33□□□□□ -0.92
TNFSF13B-201ENST00000375887 MGPP08493 103 aa9.33□□□□□ -0.92
TNFSF13B-201ENST00000375887 PF4V1P10720 104 aa9.33□□□□□ -0.92
TNFSF13B-201ENST00000375887 TRAV12-1A0A0B4J245 112 aa9.33□□□□□ -0.92
TNFSF13B-201ENST00000375887 H3BUX3 64 aa9.33□□□□□ -0.92
TNFSF13B-201ENST00000375887 CKS1BP61024 79 aa9.33□□□□□ -0.92
TNFSF13B-201ENST00000375887 FOXI2Q6ZQN5 318 aa9.33□□□□□ -0.92
TNFSF13B-201ENST00000375887 SPATA25Q9BR10 227 aa9.33□□□□□ -0.92
TNFSF13B-201ENST00000375887 RHPN1-AS1Q9BWJ2 59 aa9.33□□□□□ -0.92
TNFSF13B-201ENST00000375887 JPT2Q9H910 190 aa9.33□□□□□ -0.92
TNFSF13B-201ENST00000375887 IGLL5B9A064 214 aa9.32□□□□□ -0.92
TNFSF13B-201ENST00000375887 IGHG2P01859 326 aa9.32□□□□□ -0.92
TNFSF13B-201ENST00000375887 ORMDL2Q53FV1 153 aa9.32□□□□□ -0.92
TNFSF13B-201ENST00000375887 C2orf66Q6UXQ4 117 aa9.32□□□□□ -0.92
TNFSF13B-201ENST00000375887 NRGNQ92686 78 aa9.32□□□□□ -0.92
TNFSF13B-201ENST00000375887 C20orf78Q9BR46 151 aa9.32□□□□□ -0.92
TNFSF13B-201ENST00000375887 E9PLD3 99 aa9.32□□□□□ -0.92
TNFSF13B-201ENST00000375887 LINC00315P59091 139 aa9.32□□□□□ -0.92
TNFSF13B-201ENST00000375887 C12orf74Q32Q52 190 aa9.32□□□□□ -0.92
TNFSF13B-201ENST00000375887 BAALCQ8WXS3 180 aa9.32□□□□□ -0.92
TNFSF13B-201ENST00000375887 PKD1L2Q7Z442 2459 aa9.32□□□□□ -0.92
TNFSF13B-201ENST00000375887 USP9XQ93008 2570 aaPredicted RBP9.31□□□□□ -0.92
TNFSF13B-201ENST00000375887 PRSS29PA6NIE9 313 aa9.31□□□□□ -0.92
TNFSF13B-201ENST00000375887 IGKV3-20P01619 116 aa9.31□□□□□ -0.92
TNFSF13B-201ENST00000375887 C10orf99Q6UWK7 81 aa9.31□□□□□ -0.92
TNFSF13B-201ENST00000375887 APRG1Q8IVJ8 170 aa9.31□□□□□ -0.92
TNFSF13B-201ENST00000375887 HIST1H4GQ99525 98 aa9.31□□□□□ -0.92
TNFSF13B-201ENST00000375887 SPANXB1Q9NS25 103 aaPredicted RBP9.31□□□□□ -0.92
TNFSF13B-201ENST00000375887 TRBV7-3A0A075B6L6 115 aa9.31□□□□□ -0.92
TNFSF13B-201ENST00000375887 EMP1P54849 157 aa9.31□□□□□ -0.92
TNFSF13B-201ENST00000375887 KIF25-AS1Q9Y6Z4 181 aa9.31□□□□□ -0.92
TNFSF13B-201ENST00000375887 A6NDX4 124 aa9.3□□□□□ -0.92
TNFSF13B-201ENST00000375887 USMG5Q96IX5 58 aa9.3□□□□□ -0.92
TNFSF13B-201ENST00000375887 MYMXA0A1B0GTQ4 84 aa9.3□□□□□ -0.92
TNFSF13B-201ENST00000375887 WFDC2Q14508 124 aa9.3□□□□□ -0.92
TNFSF13B-201ENST00000375887 TCTEX1D4Q5JR98 221 aa9.3□□□□□ -0.92
TNFSF13B-201ENST00000375887 MTURNQ8N3F0 131 aa9.3□□□□□ -0.92
TNFSF13B-201ENST00000375887 OR11H12B2RN74 326 aa9.29□□□□□ -0.92
TNFSF13B-201ENST00000375887 DUSP14O95147 198 aaKnown RBP9.29□□□□□ -0.92
TNFSF13B-201ENST00000375887 TSHBP01222 138 aa9.29□□□□□ -0.92
TNFSF13B-201ENST00000375887 CRYGDP07320 174 aa9.29□□□□□ -0.92
TNFSF13B-201ENST00000375887 AMTNQ6UX39 209 aa9.29□□□□□ -0.92
TNFSF13B-201ENST00000375887 OR11H1Q8NG94 326 aa9.29□□□□□ -0.92
TNFSF13B-201ENST00000375887 OR11H2Q8NH07 326 aa9.29□□□□□ -0.92
TNFSF13B-201ENST00000375887 AVPP01185 164 aa9.29□□□□□ -0.92
TNFSF13B-201ENST00000375887 LGALS1P09382 135 aaKnown RBP9.29□□□□□ -0.92
TNFSF13B-201ENST00000375887 SLC25A16P16260 332 aa9.29□□□□□ -0.92
TNFSF13B-201ENST00000375887 TAL2Q16559 108 aa9.29□□□□□ -0.92
TNFSF13B-201ENST00000375887 CYSLTR1Q9Y271 337 aa9.29□□□□□ -0.92
TNFSF13B-201ENST00000375887 IGLV1-40P01703 118 aa9.28□□□□□ -0.92
TNFSF13B-201ENST00000375887 ETDBQ3ZM63 59 aa9.28□□□□□ -0.92
TNFSF13B-201ENST00000375887 MAPK1IP1LQ8NDC0 245 aa9.28□□□□□ -0.92
TNFSF13B-201ENST00000375887 ZNF479Q96JC4 524 aa9.28□□□□□ -0.92
TNFSF13B-201ENST00000375887 SPAG8Q99932 426 aaPredicted RBP9.28□□□□□ -0.92
TNFSF13B-201ENST00000375887 PRADC1Q9BSG0 188 aa9.28□□□□□ -0.92
TNFSF13B-201ENST00000375887 DAZ1Q9NQZ3 744 aaKnown RBP9.28□□□□□ -0.92
TNFSF13B-201ENST00000375887 MXRA5Q9NR99 2828 aa9.28□□□□□ -0.92
TNFSF13B-201ENST00000375887 IGHV4-30-2A0A087WSY4 118 aa9.28□□□□□ -0.92
TNFSF13B-201ENST00000375887 TRAV26-1A0A087WT03 109 aa9.28□□□□□ -0.92
TNFSF13B-201ENST00000375887 A0A087WWL8 130 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms