RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 DPF1Q92782 380 aa14.02□□□□□ -0.17
USP49-202ENST00000373010 TRAV12-3A0A0B4J271 114 aa14.01□□□□□ -0.17
USP49-202ENST00000373010 MGPP08493 103 aa14.01□□□□□ -0.17
USP49-202ENST00000373010 GAGE1Q13065 139 aa14.01□□□□□ -0.17
USP49-202ENST00000373010 RASL10AQ92737 203 aa14.01□□□□□ -0.17
USP49-202ENST00000373010 RPL39LQ96EH5 51 aaKnown RBP14.01□□□□□ -0.17
USP49-202ENST00000373010 AGRNO00468 2067 aa14.01□□□□□ -0.17
USP49-202ENST00000373010 HOXD3P31249 432 aaPredicted RBP14.01□□□□□ -0.17
USP49-202ENST00000373010 ODF1Q14990 250 aa14.01□□□□□ -0.17
USP49-202ENST00000373010 SAMD13Q5VXD3 122 aa14.01□□□□□ -0.17
USP49-202ENST00000373010 OR1N2Q8NGR9 330 aa14□□□□□ -0.17
USP49-202ENST00000373010 FOXC2Q99958 501 aa14□□□□□ -0.17
USP49-202ENST00000373010 SMIM2Q9BVW6 85 aa14□□□□□ -0.17
USP49-202ENST00000373010 K7EQG2 157 aa14□□□□□ -0.17
USP49-202ENST00000373010 FAM159AQ6UWV7 190 aa14□□□□□ -0.17
USP49-202ENST00000373010 C18orf65Q6ZTR6 163 aa14□□□□□ -0.17
USP49-202ENST00000373010 UBE2E2Q96LR5 201 aa14□□□□□ -0.17
USP49-202ENST00000373010 LRRC75A-AS1Q8N1F1 130 aa13.99□□□□□ -0.17
USP49-202ENST00000373010 APCP25054 2843 aa13.99□□□□□ -0.17
USP49-202ENST00000373010 SORL1Q92673 2214 aa13.98□□□□□ -0.17
USP49-202ENST00000373010 TRAV12-2A0A075B6T6 113 aa13.98□□□□□ -0.17
USP49-202ENST00000373010 A0A0J9YX75 114 aa13.98□□□□□ -0.17
USP49-202ENST00000373010 SNRPD3P62318 126 aaKnown RBP13.98□□□□□ -0.17
USP49-202ENST00000373010 DEFB136Q30KP8 78 aa13.98□□□□□ -0.17
USP49-202ENST00000373010 KRTAP1-3Q8IUG1 177 aa13.98□□□□□ -0.17
USP49-202ENST00000373010 COX11Q9Y6N1 276 aa13.98□□□□□ -0.17
USP49-202ENST00000373010 C7orf71A4D174 169 aa13.98□□□□□ -0.17
USP49-202ENST00000373010 LGALS9O00182 355 aa13.98□□□□□ -0.17
USP49-202ENST00000373010 SUMO2P61956 95 aaKnown RBP13.98□□□□□ -0.17
USP49-202ENST00000373010 C12orf54Q6X4T0 127 aa13.98□□□□□ -0.17
USP49-202ENST00000373010 AP1S3Q96PC3 154 aa13.98□□□□□ -0.17
USP49-202ENST00000373010 CD7P09564 240 aa13.97□□□□□ -0.17
USP49-202ENST00000373010 NMUP48645 174 aa13.97□□□□□ -0.17
USP49-202ENST00000373010 ZMAT4Q9H898 229 aa13.97□□□□□ -0.17
USP49-202ENST00000373010 JPT2Q9H910 190 aa13.97□□□□□ -0.17
USP49-202ENST00000373010 PCP2Q8IVA1 136 aa13.96□□□□□ -0.17
USP49-202ENST00000373010 BOD1L2Q8IYS8 172 aa13.96□□□□□ -0.17
USP49-202ENST00000373010 ORAOV1Q8WV07 137 aa13.96□□□□□ -0.17
USP49-202ENST00000373010 ATP5LO75964 103 aa13.96□□□□□ -0.17
USP49-202ENST00000373010 NXPH4O95158 308 aa13.96□□□□□ -0.17
USP49-202ENST00000373010 SLURP1P55000 103 aa13.96□□□□□ -0.17
USP49-202ENST00000373010 RNF152Q8N8N0 203 aa13.96□□□□□ -0.17
USP49-202ENST00000373010 ADAMTSL5Q6ZMM2 481 aa13.95□□□□□ -0.18
USP49-202ENST00000373010 HHLA3Q9XRX5 114 aa13.95□□□□□ -0.18
USP49-202ENST00000373010 TLN2Q9Y4G6 2542 aa13.95□□□□□ -0.18
USP49-202ENST00000373010 IGKCP01834 107 aa13.94□□□□□ -0.18
USP49-202ENST00000373010 ERASQ7Z444 233 aa13.94□□□□□ -0.18
USP49-202ENST00000373010 C20orf78Q9BR46 151 aa13.94□□□□□ -0.18
USP49-202ENST00000373010 KIF25-AS1Q9Y6Z4 181 aa13.94□□□□□ -0.18
USP49-202ENST00000373010 LINC00315P59091 139 aa13.94□□□□□ -0.18
USP49-202ENST00000373010 SPINK13Q1W4C9 94 aa13.94□□□□□ -0.18
USP49-202ENST00000373010 TCTEX1D4Q5JR98 221 aa13.94□□□□□ -0.18
USP49-202ENST00000373010 IGKV2D-26A0A0A0MRZ7 120 aa13.93□□□□□ -0.18
USP49-202ENST00000373010 TAX1BP3O14907 124 aa13.93□□□□□ -0.18
USP49-202ENST00000373010 HIST2H2BDQ6DRA6 164 aa13.93□□□□□ -0.18
USP49-202ENST00000373010 ODF3Q96PU9 254 aa13.93□□□□□ -0.18
USP49-202ENST00000373010 DUX3Q96PT4 197 aa13.93□□□□□ -0.18
USP49-202ENST00000373010 MRPL35Q9NZE8 188 aaKnown RBP13.93□□□□□ -0.18
USP49-202ENST00000373010 A0A087WWL8 130 aa13.92□□□□□ -0.18
USP49-202ENST00000373010 DPM2O94777 84 aa13.92□□□□□ -0.18
USP49-202ENST00000373010 ZNF124Q15973 351 aa13.92□□□□□ -0.18
USP49-202ENST00000373010 Q8N2B8 174 aa13.92□□□□□ -0.18
USP49-202ENST00000373010 TMEM97Q5BJF2 176 aa13.92□□□□□ -0.18
USP49-202ENST00000373010 HIST2H2BCQ6DN03 193 aa13.92□□□□□ -0.18
USP49-202ENST00000373010 NEGR1Q7Z3B1 354 aa13.92□□□□□ -0.18
USP49-202ENST00000373010 TMEM160Q9NX00 188 aa13.92□□□□□ -0.18
USP49-202ENST00000373010 MDFICQ9P1T7 246 aa13.92□□□□□ -0.18
USP49-202ENST00000373010 MYO9AB2RTY4 2548 aa13.92□□□□□ -0.18
USP49-202ENST00000373010 ZNF469Q96JG9 3925 aaPredicted RBP13.92□□□□□ -0.18
USP49-202ENST00000373010 ITPR3Q14573 2671 aa13.92□□□□□ -0.18
USP49-202ENST00000373010 ORMDL2Q53FV1 153 aa13.91□□□□□ -0.18
USP49-202ENST00000373010 GTSCR1Q86UQ5 136 aa13.91□□□□□ -0.18
USP49-202ENST00000373010 POM121L12Q8N7R1 296 aa13.91□□□□□ -0.18
USP49-202ENST00000373010 TTTY13Q9BZ97 58 aa13.91□□□□□ -0.18
USP49-202ENST00000373010 IGHV3-16A0A0C4DH30 117 aa13.91□□□□□ -0.18
USP49-202ENST00000373010 CDKN1BP46527 198 aa13.91□□□□□ -0.18
USP49-202ENST00000373010 CSTL1Q9H114 145 aa13.91□□□□□ -0.18
USP49-202ENST00000373010 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.9□□□□□ -0.18
USP49-202ENST00000373010 CBY3A6NI87 242 aa13.9□□□□□ -0.18
USP49-202ENST00000373010 ZC2HC1BQ5TFG8 222 aa13.9□□□□□ -0.18
USP49-202ENST00000373010 Q8N1Y9 231 aa13.9□□□□□ -0.18
USP49-202ENST00000373010 WFDC11Q8NEX6 87 aa13.9□□□□□ -0.18
USP49-202ENST00000373010 OR9G4Q8NGQ1 327 aa13.9□□□□□ -0.18
USP49-202ENST00000373010 DEFB104AQ8WTQ1 72 aa13.9□□□□□ -0.18
USP49-202ENST00000373010 SCGB3A1Q96QR1 104 aa13.9□□□□□ -0.18
USP49-202ENST00000373010 A0A087WX48 190 aa13.89□□□□□ -0.19
USP49-202ENST00000373010 CCL25O15444 150 aa13.89□□□□□ -0.19
USP49-202ENST00000373010 KHDC1LQ5JSQ8 128 aa13.89□□□□□ -0.19
USP49-202ENST00000373010 SUMO4Q6EEV6 95 aa13.89□□□□□ -0.19
USP49-202ENST00000373010 TOMM6Q96B49 74 aa13.89□□□□□ -0.19
USP49-202ENST00000373010 C9orf85Q96MD7 179 aa13.89□□□□□ -0.19
USP49-202ENST00000373010 DUSP14O95147 198 aaKnown RBP13.89□□□□□ -0.19
USP49-202ENST00000373010 OR11H1Q8NG94 326 aa13.89□□□□□ -0.19
USP49-202ENST00000373010 SONP18583 2426 aaKnown RBP13.88□□□□□ -0.19
USP49-202ENST00000373010 NBPF19A0A087WUL8 3843 aa13.88□□□□□ -0.19
USP49-202ENST00000373010 KNCNA6PVL3 124 aa13.88□□□□□ -0.19
USP49-202ENST00000373010 F5H697 171 aa13.88□□□□□ -0.19
USP49-202ENST00000373010 AMTNQ6UX39 209 aa13.88□□□□□ -0.19
USP49-202ENST00000373010 FOXI2Q6ZQN5 318 aa13.88□□□□□ -0.19
USP49-202ENST00000373010 IGHV1OR15-1A0A075B7D0 117 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms