RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 J3KRW8 73 aa13.58□□□□□ -0.24
CD40-201ENST00000372276 VAMP3Q15836 100 aa13.58□□□□□ -0.24
CD40-201ENST00000372276 TEX29Q8N6K0 151 aa13.58□□□□□ -0.24
CD40-201ENST00000372276 HHLA3Q9XRX5 114 aa13.58□□□□□ -0.24
CD40-201ENST00000372276 IGHV4OR15-8A0A075B7B6 117 aa13.57□□□□□ -0.24
CD40-201ENST00000372276 A0A087WW49 117 aa13.57□□□□□ -0.24
CD40-201ENST00000372276 C7orf71A4D174 169 aa13.57□□□□□ -0.24
CD40-201ENST00000372276 RNASE3P12724 160 aaKnown RBP13.57□□□□□ -0.24
CD40-201ENST00000372276 LCNL1Q6ZST4 164 aa13.57□□□□□ -0.24
CD40-201ENST00000372276 TOMM6Q96B49 74 aa13.57□□□□□ -0.24
CD40-201ENST00000372276 TRAV26-2A0A0B4J265 109 aa13.57□□□□□ -0.24
CD40-201ENST00000372276 F6UB75 175 aa13.57□□□□□ -0.24
CD40-201ENST00000372276 H7C1H1 209 aa13.57□□□□□ -0.24
CD40-201ENST00000372276 NMUP48645 174 aa13.57□□□□□ -0.24
CD40-201ENST00000372276 Q6ZQT7 251 aa13.57□□□□□ -0.24
CD40-201ENST00000372276 C14orf178Q8N769 122 aaPredicted RBP13.57□□□□□ -0.24
CD40-201ENST00000372276 RASL10AQ92737 203 aa13.57□□□□□ -0.24
CD40-201ENST00000372276 IGKV3-7A0A075B6H7 116 aa13.56□□□□□ -0.24
CD40-201ENST00000372276 H3BRM9 83 aa13.56□□□□□ -0.24
CD40-201ENST00000372276 K7EQG2 157 aa13.56□□□□□ -0.24
CD40-201ENST00000372276 WFDC3Q8IUB2 231 aa13.56□□□□□ -0.24
CD40-201ENST00000372276 SYT8Q8NBV8 401 aa13.56□□□□□ -0.24
CD40-201ENST00000372276 FLNBO75369 2602 aaKnown RBP13.55□□□□□ -0.24
CD40-201ENST00000372276 A0A0J9YX75 114 aa13.55□□□□□ -0.24
CD40-201ENST00000372276 GNRH2O43555 120 aa13.55□□□□□ -0.24
CD40-201ENST00000372276 CCL25O15444 150 aa13.54□□□□□ -0.24
CD40-201ENST00000372276 IGHV4-31P0DP07 118 aa13.54□□□□□ -0.24
CD40-201ENST00000372276 TMEM95Q3KNT9 176 aa13.54□□□□□ -0.24
CD40-201ENST00000372276 ADAMTSL5Q6ZMM2 481 aa13.54□□□□□ -0.24
CD40-201ENST00000372276 SCGB3A1Q96QR1 104 aa13.54□□□□□ -0.24
CD40-201ENST00000372276 MGPP08493 103 aa13.53□□□□□ -0.24
CD40-201ENST00000372276 OR4C5Q8NGB2 326 aa13.53□□□□□ -0.24
CD40-201ENST00000372276 NRGNQ92686 78 aa13.53□□□□□ -0.24
CD40-201ENST00000372276 TP73-AS1Q9UF72 201 aa13.53□□□□□ -0.24
CD40-201ENST00000372276 TRAV2A0A0B4J234 112 aa13.53□□□□□ -0.24
CD40-201ENST00000372276 F8VRH5 84 aa13.53□□□□□ -0.24
CD40-201ENST00000372276 HIST2H2BCQ6DN03 193 aa13.53□□□□□ -0.24
CD40-201ENST00000372276 FOXI2Q6ZQN5 318 aa13.53□□□□□ -0.24
CD40-201ENST00000372276 ZNF702PQ9H963 129 aa13.53□□□□□ -0.24
CD40-201ENST00000372276 KIF25-AS1Q9Y6Z4 181 aa13.53□□□□□ -0.24
CD40-201ENST00000372276 TAL2Q16559 108 aa13.52□□□□□ -0.25
CD40-201ENST00000372276 DEFB113Q30KQ7 82 aa13.52□□□□□ -0.25
CD40-201ENST00000372276 ZC2HC1BQ5TFG8 222 aa13.52□□□□□ -0.25
CD40-201ENST00000372276 Q8N2B8 174 aa13.52□□□□□ -0.25
CD40-201ENST00000372276 TMEM160Q9NX00 188 aa13.52□□□□□ -0.25
CD40-201ENST00000372276 MRPL35Q9NZE8 188 aaKnown RBP13.52□□□□□ -0.25
CD40-201ENST00000372276 RNF223E7ERA6 249 aa13.51□□□□□ -0.25
CD40-201ENST00000372276 VCYO14598 125 aa13.51□□□□□ -0.25
CD40-201ENST00000372276 CD7P09564 240 aa13.51□□□□□ -0.25
CD40-201ENST00000372276 SRD5A1P18405 259 aa13.51□□□□□ -0.25
CD40-201ENST00000372276 CDKN1BP46527 198 aa13.51□□□□□ -0.25
CD40-201ENST00000372276 DEFB1P60022 68 aa13.51□□□□□ -0.25
CD40-201ENST00000372276 PAPPA-AS1Q5QFB9 102 aa13.51□□□□□ -0.25
CD40-201ENST00000372276 ERASQ7Z444 233 aa13.51□□□□□ -0.25
CD40-201ENST00000372276 PCP2Q8IVA1 136 aa13.51□□□□□ -0.25
CD40-201ENST00000372276 K7EP13 123 aa13.5□□□□□ -0.25
CD40-201ENST00000372276 C9orf85Q96MD7 179 aa13.5□□□□□ -0.25
CD40-201ENST00000372276 SPG11Q96JI7 2443 aa13.5□□□□□ -0.25
CD40-201ENST00000372276 TRBV6-5A0A0K0K1A5 114 aa13.5□□□□□ -0.25
CD40-201ENST00000372276 C9orf118A6NHY6 69 aa13.5□□□□□ -0.25
CD40-201ENST00000372276 ZNF688P0C7X2 276 aa13.5□□□□□ -0.25
CD40-201ENST00000372276 C2orf66Q6UXQ4 117 aa13.5□□□□□ -0.25
CD40-201ENST00000372276 TMEM86BQ8N661 226 aa13.5□□□□□ -0.25
CD40-201ENST00000372276 CHTOPQ9Y3Y2 248 aaKnown RBP13.5□□□□□ -0.25
CD40-201ENST00000372276 NBPF19A0A087WUL8 3843 aa13.49□□□□□ -0.25
CD40-201ENST00000372276 TRGV11A0A075B6L2 103 aa13.49□□□□□ -0.25
CD40-201ENST00000372276 IGHV1OR15-1A0A075B7D0 117 aa13.49□□□□□ -0.25
CD40-201ENST00000372276 TRAV12-3A0A0B4J271 114 aa13.49□□□□□ -0.25
CD40-201ENST00000372276 CBY3A6NI87 242 aa13.49□□□□□ -0.25
CD40-201ENST00000372276 HOXD3P31249 432 aaPredicted RBP13.49□□□□□ -0.25
CD40-201ENST00000372276 SYNJ2BPP57105 145 aa13.49□□□□□ -0.25
CD40-201ENST00000372276 LINC00315P59091 139 aa13.49□□□□□ -0.25
CD40-201ENST00000372276 CRYBG3Q68DQ2 2970 aa13.49□□□□□ -0.25
CD40-201ENST00000372276 GTF2H5Q6ZYL4 71 aa13.49□□□□□ -0.25
CD40-201ENST00000372276 NEXN-AS1Q8NBZ9 246 aa13.49□□□□□ -0.25
CD40-201ENST00000372276 KIR2DL4Q99706 377 aa13.49□□□□□ -0.25
CD40-201ENST00000372276 CSTL1Q9H114 145 aa13.49□□□□□ -0.25
CD40-201ENST00000372276 CYSLTR1Q9Y271 337 aa13.49□□□□□ -0.25
CD40-201ENST00000372276 UNC79Q9P2D8 2635 aa13.49□□□□□ -0.25
CD40-201ENST00000372276 IGHV3-16A0A0C4DH30 117 aa13.48□□□□□ -0.25
CD40-201ENST00000372276 Q6ZVH6 145 aa13.48□□□□□ -0.25
CD40-201ENST00000372276 RPL39LQ96EH5 51 aaKnown RBP13.48□□□□□ -0.25
CD40-201ENST00000372276 TMEM141Q96I45 108 aa13.48□□□□□ -0.25
CD40-201ENST00000372276 PEMTQ9UBM1 199 aa13.48□□□□□ -0.25
CD40-201ENST00000372276 CELSR2Q9HCU4 2923 aa13.48□□□□□ -0.25
CD40-201ENST00000372276 CENPEQ02224 2701 aa13.47□□□□□ -0.25
CD40-201ENST00000372276 LINC01619G3V211 115 aa13.47□□□□□ -0.25
CD40-201ENST00000372276 POLR2KP53803 58 aaKnown RBP13.47□□□□□ -0.25
CD40-201ENST00000372276 GTSCR1Q86UQ5 136 aa13.47□□□□□ -0.25
CD40-201ENST00000372276 HOXA3O43365 443 aaPredicted RBP13.46□□□□□ -0.25
CD40-201ENST00000372276 Q5PR19 223 aa13.46□□□□□ -0.25
CD40-201ENST00000372276 PRRC2AP48634 2157 aaKnown RBP13.46□□□□□ -0.25
CD40-201ENST00000372276 SETXQ7Z333 2677 aaKnown RBP13.46□□□□□ -0.25
CD40-201ENST00000372276 AMMECR1LQ6DCA0 310 aa13.46□□□□□ -0.26
CD40-201ENST00000372276 WFDC12Q8WWY7 111 aa13.46□□□□□ -0.26
CD40-201ENST00000372276 CHAC1Q9BUX1 264 aa13.46□□□□□ -0.26
CD40-201ENST00000372276 CSPG4Q6UVK1 2322 aa13.45□□□□□ -0.26
CD40-201ENST00000372276 TRBV25-1A0A075B6N4 114 aa13.45□□□□□ -0.26
CD40-201ENST00000372276 IGKV2D-26A0A0A0MRZ7 120 aa13.45□□□□□ -0.26
CD40-201ENST00000372276 SMIM13P0DJ93 91 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms