RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 LENEPQ9Y5L5 61 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 SNURFLB1AK76 121 aa11.5□□□□□ -0.57
PFDN4-201ENST00000371419 GPX1P07203 203 aa11.5□□□□□ -0.57
PFDN4-201ENST00000371419 SMUG1Q53HV7 270 aa11.5□□□□□ -0.57
PFDN4-201ENST00000371419 ZFAND2AQ8N6M9 145 aa11.5□□□□□ -0.57
PFDN4-201ENST00000371419 LINC01587Q99440 93 aa11.5□□□□□ -0.57
PFDN4-201ENST00000371419 TRAV12-3A0A0B4J271 114 aa11.49□□□□□ -0.57
PFDN4-201ENST00000371419 XKRY2A2RUG3 117 aa11.49□□□□□ -0.57
PFDN4-201ENST00000371419 C7orf71A4D174 169 aa11.49□□□□□ -0.57
PFDN4-201ENST00000371419 HIGD1CA8MV81 97 aa11.49□□□□□ -0.57
PFDN4-201ENST00000371419 DEFB4AO15263 64 aa11.49□□□□□ -0.57
PFDN4-201ENST00000371419 RRN3P1Q2M238 152 aa11.49□□□□□ -0.57
PFDN4-201ENST00000371419 OR2D3Q8NGH3 330 aa11.49□□□□□ -0.57
PFDN4-201ENST00000371419 SPINK4O60575 86 aa11.48□□□□□ -0.57
PFDN4-201ENST00000371419 S100A2P29034 98 aa11.48□□□□□ -0.57
PFDN4-201ENST00000371419 RNASE4P34096 147 aaKnown RBP11.48□□□□□ -0.57
PFDN4-201ENST00000371419 TMEM136Q6ZRR5 245 aa11.48□□□□□ -0.57
PFDN4-201ENST00000371419 HIST3H2BBQ8N257 126 aa11.48□□□□□ -0.57
PFDN4-201ENST00000371419 FOXA3P55318 350 aaPredicted RBP11.47□□□□□ -0.57
PFDN4-201ENST00000371419 RAB4BP61018 213 aa11.47□□□□□ -0.57
PFDN4-201ENST00000371419 FAM162BQ5T6X4 162 aa11.47□□□□□ -0.57
PFDN4-201ENST00000371419 Q6AWC8 147 aa11.47□□□□□ -0.57
PFDN4-201ENST00000371419 MRPL54Q6P161 138 aaKnown RBP11.47□□□□□ -0.57
PFDN4-201ENST00000371419 LINC00518Q8N0U6 118 aa11.47□□□□□ -0.57
PFDN4-201ENST00000371419 C8orf49Q96NF6 230 aa11.47□□□□□ -0.57
PFDN4-201ENST00000371419 DNAH7Q8WXX0 4024 aa11.47□□□□□ -0.57
PFDN4-201ENST00000371419 TMEM189A5PLL7 270 aa11.46□□□□□ -0.57
PFDN4-201ENST00000371419 RPS20P60866 119 aaKnown RBP11.46□□□□□ -0.57
PFDN4-201ENST00000371419 PRR9Q5T870 116 aa11.46□□□□□ -0.57
PFDN4-201ENST00000371419 ZNF324O75467 553 aaPredicted RBP11.45□□□□□ -0.58
PFDN4-201ENST00000371419 HTN1P15515 57 aa11.45□□□□□ -0.58
PFDN4-201ENST00000371419 CRIP1P50238 77 aa11.45□□□□□ -0.58
PFDN4-201ENST00000371419 IL17DQ8TAD2 202 aa11.45□□□□□ -0.58
PFDN4-201ENST00000371419 GTSF1Q8WW33 167 aa11.45□□□□□ -0.58
PFDN4-201ENST00000371419 A0A1B0GXF2 115 aa11.44□□□□□ -0.58
PFDN4-201ENST00000371419 PRM2P04554 102 aa11.44□□□□□ -0.58
PFDN4-201ENST00000371419 SMIM6P0DI80 62 aa11.44□□□□□ -0.58
PFDN4-201ENST00000371419 HBBP68871 147 aa11.44□□□□□ -0.58
PFDN4-201ENST00000371419 MUC7Q8TAX7 377 aa11.44□□□□□ -0.58
PFDN4-201ENST00000371419 SH2D1AO60880 128 aa11.44□□□□□ -0.58
PFDN4-201ENST00000371419 APCSP02743 223 aa11.44□□□□□ -0.58
PFDN4-201ENST00000371419 EMP1P54849 157 aa11.44□□□□□ -0.58
PFDN4-201ENST00000371419 C11orf45Q8TAV5 145 aa11.44□□□□□ -0.58
PFDN4-201ENST00000371419 BORCS7Q96B45 105 aa11.44□□□□□ -0.58
PFDN4-201ENST00000371419 A0A1B0GW15 77 aa11.43□□□□□ -0.58
PFDN4-201ENST00000371419 FABP5P3A8MUU1 101 aa11.43□□□□□ -0.58
PFDN4-201ENST00000371419 AZU1P20160 251 aa11.43□□□□□ -0.58
PFDN4-201ENST00000371419 Q0VG73 95 aa11.43□□□□□ -0.58
PFDN4-201ENST00000371419 RIGQ13278 110 aa11.43□□□□□ -0.58
PFDN4-201ENST00000371419 ZNF493Q6ZR52 646 aa11.43□□□□□ -0.58
PFDN4-201ENST00000371419 PGLYRP4Q96LB8 373 aa11.43□□□□□ -0.58
PFDN4-201ENST00000371419 LINC00467Q9BRT7 94 aa11.43□□□□□ -0.58
PFDN4-201ENST00000371419 IFITM10A6NMD0 228 aa11.42□□□□□ -0.58
PFDN4-201ENST00000371419 Q6ZQT7 251 aa11.42□□□□□ -0.58
PFDN4-201ENST00000371419 TMEM263Q8WUH6 116 aaKnown RBP11.42□□□□□ -0.58
PFDN4-201ENST00000371419 C16orf74Q96GX8 76 aa11.42□□□□□ -0.58
PFDN4-201ENST00000371419 A0A1B0GUT8 65 aa11.41□□□□□ -0.58
PFDN4-201ENST00000371419 C3orf84H3BNL1 204 aa11.41□□□□□ -0.58
PFDN4-201ENST00000371419 CAMPP49913 170 aa11.41□□□□□ -0.58
PFDN4-201ENST00000371419 OR10J3Q5JRS4 329 aa11.41□□□□□ -0.58
PFDN4-201ENST00000371419 RNASE8Q8TDE3 154 aaKnown RBP11.41□□□□□ -0.58
PFDN4-201ENST00000371419 IGHV1OR15-1A0A075B7D0 117 aa11.4□□□□□ -0.58
PFDN4-201ENST00000371419 TRAV21A0A0B4J279 112 aa11.4□□□□□ -0.58
PFDN4-201ENST00000371419 TEX48A0A1B0GUV7 120 aa11.4□□□□□ -0.58
PFDN4-201ENST00000371419 CBY3A6NI87 242 aa11.4□□□□□ -0.58
PFDN4-201ENST00000371419 SPART-AS1P0CW21 52 aa11.4□□□□□ -0.58
PFDN4-201ENST00000371419 GZMBP10144 247 aa11.4□□□□□ -0.58
PFDN4-201ENST00000371419 NANOS2P60321 138 aaKnown RBP11.4□□□□□ -0.58
PFDN4-201ENST00000371419 PDZD11Q5EBL8 140 aa11.4□□□□□ -0.58
PFDN4-201ENST00000371419 TMEM18Q96B42 140 aa11.4□□□□□ -0.58
PFDN4-201ENST00000371419 C12orf57Q99622 126 aa11.4□□□□□ -0.58
PFDN4-201ENST00000371419 CELA1Q9UNI1 258 aa11.4□□□□□ -0.58
PFDN4-201ENST00000371419 PLAC8L1A1L4L8 177 aa11.39□□□□□ -0.59
PFDN4-201ENST00000371419 FABP4P15090 132 aa11.39□□□□□ -0.59
PFDN4-201ENST00000371419 ANXA2RQ3ZCQ2 193 aa11.39□□□□□ -0.59
PFDN4-201ENST00000371419 GATD1Q8NB37 220 aa11.39□□□□□ -0.59
PFDN4-201ENST00000371419 HIST1H2BLQ99880 126 aa11.39□□□□□ -0.59
PFDN4-201ENST00000371419 DKK2Q9UBU2 259 aa11.39□□□□□ -0.59
PFDN4-201ENST00000371419 ZNF80P51504 273 aaPredicted RBP11.38□□□□□ -0.59
PFDN4-201ENST00000371419 MUC21Q5SSG8 566 aa11.38□□□□□ -0.59
PFDN4-201ENST00000371419 FAM222AQ5U5X8 452 aa11.38□□□□□ -0.59
PFDN4-201ENST00000371419 FAM159AQ6UWV7 190 aa11.38□□□□□ -0.59
PFDN4-201ENST00000371419 BAGE3Q86Y29 109 aa11.38□□□□□ -0.59
PFDN4-201ENST00000371419 OR10D4PQ8NGN7 298 aa11.38□□□□□ -0.59
PFDN4-201ENST00000371419 GRIFINA4D1Z8 144 aa11.38□□□□□ -0.59
PFDN4-201ENST00000371419 LYRM9A8MSI8 78 aa11.38□□□□□ -0.59
PFDN4-201ENST00000371419 ESDP10768 282 aa11.38□□□□□ -0.59
PFDN4-201ENST00000371419 SLAQ13239 276 aa11.38□□□□□ -0.59
PFDN4-201ENST00000371419 LINC01559Q495D7 138 aa11.38□□□□□ -0.59
PFDN4-201ENST00000371419 ZFAND6Q6FIF0 208 aa11.38□□□□□ -0.59
PFDN4-201ENST00000371419 PACRGQ96M98 296 aaPredicted RBP11.38□□□□□ -0.59
PFDN4-201ENST00000371419 NAGKQ9UJ70 344 aa11.38□□□□□ -0.59
PFDN4-201ENST00000371419 TIMM8BQ9Y5J9 83 aaPredicted RBP11.38□□□□□ -0.59
PFDN4-201ENST00000371419 ORM1P02763 201 aa11.37□□□□□ -0.59
PFDN4-201ENST00000371419 SRIP30626 198 aa11.37□□□□□ -0.59
PFDN4-201ENST00000371419 C12orf74Q32Q52 190 aa11.37□□□□□ -0.59
PFDN4-201ENST00000371419 KIAA1644Q3SXP7 199 aa11.37□□□□□ -0.59
PFDN4-201ENST00000371419 TP53TG3Q9ULZ0 132 aa11.37□□□□□ -0.59
PFDN4-201ENST00000371419 CSMD3Q7Z407 3707 aa11.36□□□□□ -0.59
PFDN4-201ENST00000371419 ARMS2P0C7Q2 107 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms