RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 NIT1Q86X76 327 aa12.9□□□□□ -0.35
SSBP3-203ENST00000371319 NXPH4O95158 308 aa12.89□□□□□ -0.35
SSBP3-203ENST00000371319 CD7P09564 240 aa12.89□□□□□ -0.35
SSBP3-203ENST00000371319 EVI2AP22794 236 aa12.89□□□□□ -0.35
SSBP3-203ENST00000371319 F8P00451 2351 aa12.89□□□□□ -0.35
SSBP3-203ENST00000371319 IGHV3-16A0A0C4DH30 117 aa12.88□□□□□ -0.35
SSBP3-203ENST00000371319 SMKR1H3BMG3 65 aa12.88□□□□□ -0.35
SSBP3-203ENST00000371319 CMC4P56277 68 aaPredicted RBP12.88□□□□□ -0.35
SSBP3-203ENST00000371319 RNASEKQ6P5S7 137 aaKnown RBP12.88□□□□□ -0.35
SSBP3-203ENST00000371319 ORMDL3Q8N138 153 aa12.88□□□□□ -0.35
SSBP3-203ENST00000371319 PRELID3AQ96N28 172 aa12.88□□□□□ -0.35
SSBP3-203ENST00000371319 PHLDA3Q9Y5J5 127 aa12.88□□□□□ -0.35
SSBP3-203ENST00000371319 M0R381 172 aa12.87□□□□□ -0.35
SSBP3-203ENST00000371319 TRPT1Q86TN4 253 aaKnown RBP12.87□□□□□ -0.35
SSBP3-203ENST00000371319 C9orf85Q96MD7 179 aa12.87□□□□□ -0.35
SSBP3-203ENST00000371319 SAMD10Q9BYL1 202 aa12.87□□□□□ -0.35
SSBP3-203ENST00000371319 SETD2Q9BYW2 2564 aaPredicted RBP12.87□□□□□ -0.35
SSBP3-203ENST00000371319 NCR2O95944 276 aa12.86□□□□□ -0.35
SSBP3-203ENST00000371319 PMCHP20382 165 aa12.86□□□□□ -0.35
SSBP3-203ENST00000371319 CKS2P33552 79 aa12.86□□□□□ -0.35
SSBP3-203ENST00000371319 SMIM15Q7Z3B0 74 aa12.86□□□□□ -0.35
SSBP3-203ENST00000371319 Q8N1Y9 231 aa12.86□□□□□ -0.35
SSBP3-203ENST00000371319 SPATA3Q8NHX4 192 aa12.86□□□□□ -0.35
SSBP3-203ENST00000371319 FAM110AQ9BQ89 295 aa12.86□□□□□ -0.35
SSBP3-203ENST00000371319 C19orf73Q9NVV2 129 aa12.86□□□□□ -0.35
SSBP3-203ENST00000371319 MUC4Q99102 2169 aa12.86□□□□□ -0.35
SSBP3-203ENST00000371319 GAS8-AS1O95177 125 aa12.86□□□□□ -0.35
SSBP3-203ENST00000371319 AMTP48728 403 aa12.86□□□□□ -0.35
SSBP3-203ENST00000371319 Q6ZWC4 215 aa12.86□□□□□ -0.35
SSBP3-203ENST00000371319 STHQ8IWL8 128 aa12.86□□□□□ -0.35
SSBP3-203ENST00000371319 FAM19A2Q8N3H0 131 aa12.86□□□□□ -0.35
SSBP3-203ENST00000371319 CHCHD1Q96BP2 118 aaKnown RBP12.86□□□□□ -0.35
SSBP3-203ENST00000371319 MDFICQ9P1T7 246 aa12.86□□□□□ -0.35
SSBP3-203ENST00000371319 FLNBO75369 2602 aaKnown RBP12.85□□□□□ -0.35
SSBP3-203ENST00000371319 NPYP01303 97 aa12.85□□□□□ -0.35
SSBP3-203ENST00000371319 HSBP1O75506 76 aa12.84□□□□□ -0.35
SSBP3-203ENST00000371319 PPBPP02775 128 aa12.84□□□□□ -0.35
SSBP3-203ENST00000371319 LINC00614P0C842 121 aa12.84□□□□□ -0.35
SSBP3-203ENST00000371319 JOSD1Q15040 202 aaPredicted RBP12.84□□□□□ -0.35
SSBP3-203ENST00000371319 CDPF1Q6NVV7 123 aa12.84□□□□□ -0.35
SSBP3-203ENST00000371319 TRGV11A0A075B6L2 103 aa12.83□□□□□ -0.36
SSBP3-203ENST00000371319 BAHCC1Q9P281 2608 aa12.83□□□□□ -0.36
SSBP3-203ENST00000371319 INSP01308 110 aa12.82□□□□□ -0.36
SSBP3-203ENST00000371319 GATA1P15976 413 aaPredicted RBP12.82□□□□□ -0.36
SSBP3-203ENST00000371319 C20orf144Q9BQM9 153 aa12.82□□□□□ -0.36
SSBP3-203ENST00000371319 LINC00467Q9BRT7 94 aa12.82□□□□□ -0.36
SSBP3-203ENST00000371319 WFDC10AQ9H1F0 79 aa12.82□□□□□ -0.36
SSBP3-203ENST00000371319 DPH3P1Q9H4G8 78 aa12.82□□□□□ -0.36
SSBP3-203ENST00000371319 CBY3A6NI87 242 aa12.81□□□□□ -0.36
SSBP3-203ENST00000371319 KRTAP24-1Q3LI83 254 aa12.81□□□□□ -0.36
SSBP3-203ENST00000371319 C14orf178Q8N769 122 aaPredicted RBP12.81□□□□□ -0.36
SSBP3-203ENST00000371319 AP1S3Q96PC3 154 aa12.81□□□□□ -0.36
SSBP3-203ENST00000371319 LAMTOR2Q9Y2Q5 125 aa12.81□□□□□ -0.36
SSBP3-203ENST00000371319 TRAV26-2A0A0B4J265 109 aa12.81□□□□□ -0.36
SSBP3-203ENST00000371319 LOC389332A0A1B0GUA5 103 aa12.81□□□□□ -0.36
SSBP3-203ENST00000371319 IFI27P40305 119 aaPredicted RBP12.81□□□□□ -0.36
SSBP3-203ENST00000371319 PRSS3P2Q8NHM4 247 aa12.81□□□□□ -0.36
SSBP3-203ENST00000371319 NIT2Q9NQR4 276 aa12.81□□□□□ -0.36
SSBP3-203ENST00000371319 KIF25-AS1Q9Y6Z4 181 aa12.81□□□□□ -0.36
SSBP3-203ENST00000371319 IGHV1-24A0A0C4DH33 117 aa12.8□□□□□ -0.36
SSBP3-203ENST00000371319 TNFRSF6BO95407 300 aa12.8□□□□□ -0.36
SSBP3-203ENST00000371319 INSL3P51460 131 aa12.8□□□□□ -0.36
SSBP3-203ENST00000371319 PMCHL1Q16048 86 aa12.8□□□□□ -0.36
SSBP3-203ENST00000371319 C9orf66Q5T8R8 295 aa12.8□□□□□ -0.36
SSBP3-203ENST00000371319 POM121L12Q8N7R1 296 aa12.8□□□□□ -0.36
SSBP3-203ENST00000371319 NRACQ8N912 160 aa12.8□□□□□ -0.36
SSBP3-203ENST00000371319 MRAP2Q96G30 205 aa12.8□□□□□ -0.36
SSBP3-203ENST00000371319 XCL2Q9UBD3 114 aa12.8□□□□□ -0.36
SSBP3-203ENST00000371319 PRM2P04554 102 aa12.79□□□□□ -0.36
SSBP3-203ENST00000371319 LINC00315P59091 139 aa12.79□□□□□ -0.36
SSBP3-203ENST00000371319 FA2HQ7L5A8 372 aa12.79□□□□□ -0.36
SSBP3-203ENST00000371319 JPT2Q9H910 190 aa12.79□□□□□ -0.36
SSBP3-203ENST00000371319 C1orf158Q8N1D5 194 aa12.78□□□□□ -0.36
SSBP3-203ENST00000371319 LINC01587Q99440 93 aa12.78□□□□□ -0.36
SSBP3-203ENST00000371319 MAP1LC3AQ9H492 121 aa12.78□□□□□ -0.36
SSBP3-203ENST00000371319 GSN-AS1Q9NRJ2 163 aa12.78□□□□□ -0.36
SSBP3-203ENST00000371319 GIG44P09565 113 aaPredicted RBP12.77□□□□□ -0.36
SSBP3-203ENST00000371319 SYT8Q8NBV8 401 aa12.77□□□□□ -0.36
SSBP3-203ENST00000371319 AP5S1Q9NUS5 200 aa12.77□□□□□ -0.36
SSBP3-203ENST00000371319 LINC01546A6NGU7 62 aa12.77□□□□□ -0.37
SSBP3-203ENST00000371319 PRSS47A8MTI9 375 aa12.77□□□□□ -0.37
SSBP3-203ENST00000371319 MGPP08493 103 aa12.77□□□□□ -0.37
SSBP3-203ENST00000371319 HTN1P15515 57 aa12.77□□□□□ -0.37
SSBP3-203ENST00000371319 NUTF2P61970 127 aaKnown RBP12.76□□□□□ -0.37
SSBP3-203ENST00000371319 C11orf72Q8NBR9 251 aa12.76□□□□□ -0.37
SSBP3-203ENST00000371319 IGLV2-18A0A075B6J9 118 aa12.75□□□□□ -0.37
SSBP3-203ENST00000371319 C3orf79P0CE67 100 aa12.75□□□□□ -0.37
SSBP3-203ENST00000371319 RPL35AP18077 110 aaKnown RBP12.75□□□□□ -0.37
SSBP3-203ENST00000371319 KRTDAPP60985 99 aa12.75□□□□□ -0.37
SSBP3-203ENST00000371319 ZNF415Q09FC8 603 aa12.75□□□□□ -0.37
SSBP3-203ENST00000371319 DEFB125Q8N687 156 aa12.75□□□□□ -0.37
SSBP3-203ENST00000371319 Q8N976 141 aa12.75□□□□□ -0.37
SSBP3-203ENST00000371319 RASL10AQ92737 203 aa12.75□□□□□ -0.37
SSBP3-203ENST00000371319 A0A087WWL8 130 aa12.74□□□□□ -0.37
SSBP3-203ENST00000371319 SCGB1D1O95968 90 aa12.74□□□□□ -0.37
SSBP3-203ENST00000371319 SMIM17P0DL12 118 aa12.74□□□□□ -0.37
SSBP3-203ENST00000371319 PRIMA1Q86XR5 153 aa12.74□□□□□ -0.37
SSBP3-203ENST00000371319 WFDC9Q8NEX5 89 aa12.74□□□□□ -0.37
SSBP3-203ENST00000371319 A0A096LNJ9 63 aa12.73□□□□□ -0.37
SSBP3-203ENST00000371319 CRYGDP07320 174 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms