RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 GAGE2BQ13066 116 aa9.4□□□□□ -0.9
PHGDH-201ENST00000369407 TAL2Q16559 108 aa9.4□□□□□ -0.9
PHGDH-201ENST00000369407 GAGE2EQ4V326 116 aa9.4□□□□□ -0.9
PHGDH-201ENST00000369407 GAGE2DQ9UEU5 116 aa9.4□□□□□ -0.9
PHGDH-201ENST00000369407 MAP1AP78559 2803 aaPredicted RBP9.4□□□□□ -0.9
PHGDH-201ENST00000369407 TRAV8-2A0A0B4J237 113 aa9.4□□□□□ -0.91
PHGDH-201ENST00000369407 H7C2G1 150 aa9.4□□□□□ -0.91
PHGDH-201ENST00000369407 SCGB1C2P0DMR2 95 aa9.4□□□□□ -0.91
PHGDH-201ENST00000369407 PSMG4Q5JS54 123 aa9.4□□□□□ -0.91
PHGDH-201ENST00000369407 SMIM2Q9BVW6 85 aa9.4□□□□□ -0.91
PHGDH-201ENST00000369407 G3V318 75 aa9.39□□□□□ -0.91
PHGDH-201ENST00000369407 CD3EP07766 207 aa9.39□□□□□ -0.91
PHGDH-201ENST00000369407 FAM159AQ6UWV7 190 aa9.39□□□□□ -0.91
PHGDH-201ENST00000369407 IGHV7-81A0A0B4J1V7 117 aa9.39□□□□□ -0.91
PHGDH-201ENST00000369407 B9A039 149 aa9.39□□□□□ -0.91
PHGDH-201ENST00000369407 PIP4P1Q86T03 277 aa9.39□□□□□ -0.91
PHGDH-201ENST00000369407 PPDPFQ9H3Y8 114 aa9.39□□□□□ -0.91
PHGDH-201ENST00000369407 YAE1D1Q9NRH1 226 aa9.39□□□□□ -0.91
PHGDH-201ENST00000369407 CFAP126Q5VTH2 177 aa9.38□□□□□ -0.91
PHGDH-201ENST00000369407 HRNRQ86YZ3 2850 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-201ENST00000369407 M0QXV9 152 aa9.38□□□□□ -0.91
PHGDH-201ENST00000369407 SNCGO76070 127 aa9.38□□□□□ -0.91
PHGDH-201ENST00000369407 TMEM190Q8WZ59 177 aa9.38□□□□□ -0.91
PHGDH-201ENST00000369407 AJUBAQ96IF1 538 aa9.38□□□□□ -0.91
PHGDH-201ENST00000369407 FAM110AQ9BQ89 295 aa9.38□□□□□ -0.91
PHGDH-201ENST00000369407 ZFAND3Q9H8U3 227 aa9.38□□□□□ -0.91
PHGDH-201ENST00000369407 IGKV3-7A0A075B6H7 116 aa9.38□□□□□ -0.91
PHGDH-201ENST00000369407 CLPSL1A2RUU4 121 aa9.38□□□□□ -0.91
PHGDH-201ENST00000369407 SRSF2Q01130 221 aaKnown RBP9.38□□□□□ -0.91
PHGDH-201ENST00000369407 BAALCQ8WXS3 180 aa9.38□□□□□ -0.91
PHGDH-201ENST00000369407 RASL10AQ92737 203 aa9.38□□□□□ -0.91
PHGDH-201ENST00000369407 LINC00527Q9UJ94 153 aa9.38□□□□□ -0.91
PHGDH-201ENST00000369407 MRPL23Q16540 153 aaKnown RBP9.37□□□□□ -0.91
PHGDH-201ENST00000369407 C2orf66Q6UXQ4 117 aa9.37□□□□□ -0.91
PHGDH-201ENST00000369407 NEXN-AS1Q8NBZ9 246 aa9.37□□□□□ -0.91
PHGDH-201ENST00000369407 DLX4Q92988 240 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-201ENST00000369407 SUMO2P61956 95 aaKnown RBP9.37□□□□□ -0.91
PHGDH-201ENST00000369407 OR11H6Q8NGC7 330 aa9.37□□□□□ -0.91
PHGDH-201ENST00000369407 TRAV4A0A0B4J268 109 aa9.36□□□□□ -0.91
PHGDH-201ENST00000369407 S100A4P26447 101 aaKnown RBP9.36□□□□□ -0.91
PHGDH-201ENST00000369407 VMO1Q7Z5L0 202 aa9.36□□□□□ -0.91
PHGDH-201ENST00000369407 CARD19Q96LW7 228 aa9.36□□□□□ -0.91
PHGDH-201ENST00000369407 ATP6V0E1O15342 81 aa9.36□□□□□ -0.91
PHGDH-201ENST00000369407 DUSP14O95147 198 aaKnown RBP9.36□□□□□ -0.91
PHGDH-201ENST00000369407 NHLRC4P0CG21 123 aaPredicted RBP9.36□□□□□ -0.91
PHGDH-201ENST00000369407 MEIG1Q5JSS6 88 aa9.36□□□□□ -0.91
PHGDH-201ENST00000369407 Q6ZS46 218 aa9.36□□□□□ -0.91
PHGDH-201ENST00000369407 LY6G5BQ8NDX9 201 aa9.35□□□□□ -0.91
PHGDH-201ENST00000369407 TOMM6Q96B49 74 aa9.35□□□□□ -0.91
PHGDH-201ENST00000369407 C16orf92Q96LL3 132 aa9.35□□□□□ -0.91
PHGDH-201ENST00000369407 C20orf173Q96LM9 149 aa9.35□□□□□ -0.91
PHGDH-201ENST00000369407 CCDC140Q96MF4 163 aa9.35□□□□□ -0.91
PHGDH-201ENST00000369407 CRLF1O75462 422 aa9.35□□□□□ -0.91
PHGDH-201ENST00000369407 PTPRQQ9UMZ3 2332 aa9.35□□□□□ -0.91
PHGDH-201ENST00000369407 TRAV12-1A0A0B4J245 112 aa9.34□□□□□ -0.91
PHGDH-201ENST00000369407 F6UB75 175 aa9.34□□□□□ -0.91
PHGDH-201ENST00000369407 TCL1BO95988 128 aa9.34□□□□□ -0.91
PHGDH-201ENST00000369407 NDUFV3P56181 108 aaKnown RBP9.34□□□□□ -0.91
PHGDH-201ENST00000369407 GNRH2O43555 120 aa9.34□□□□□ -0.91
PHGDH-201ENST00000369407 Q8N9W7 124 aa9.34□□□□□ -0.91
PHGDH-201ENST00000369407 Q8NA96 180 aa9.34□□□□□ -0.91
PHGDH-201ENST00000369407 C11orf86A6NJI1 115 aa9.34□□□□□ -0.91
PHGDH-201ENST00000369407 ODF3BA8MYP8 253 aa9.34□□□□□ -0.91
PHGDH-201ENST00000369407 PPDPFLQ8WWR9 84 aa9.34□□□□□ -0.91
PHGDH-201ENST00000369407 SLC50A1Q9BRV3 221 aa9.34□□□□□ -0.91
PHGDH-201ENST00000369407 VPS13CQ709C8 3753 aa9.33□□□□□ -0.92
PHGDH-201ENST00000369407 RPL39P62891 51 aaKnown RBP9.33□□□□□ -0.92
PHGDH-201ENST00000369407 ORMDL2Q53FV1 153 aa9.33□□□□□ -0.92
PHGDH-201ENST00000369407 PHLDA3Q9Y5J5 127 aa9.33□□□□□ -0.92
PHGDH-201ENST00000369407 RBAKDNA6NC62 111 aa9.32□□□□□ -0.92
PHGDH-201ENST00000369407 RNF223E7ERA6 249 aa9.32□□□□□ -0.92
PHGDH-201ENST00000369407 ZNF688P0C7X2 276 aa9.32□□□□□ -0.92
PHGDH-201ENST00000369407 ANKRD29Q8N6D5 301 aa9.32□□□□□ -0.92
PHGDH-201ENST00000369407 RAX2Q96IS3 184 aa9.32□□□□□ -0.92
PHGDH-201ENST00000369407 JPT2Q9H910 190 aa9.32□□□□□ -0.92
PHGDH-201ENST00000369407 TNFRSF18Q9Y5U5 241 aa9.32□□□□□ -0.92
PHGDH-201ENST00000369407 A8MWV9 139 aa9.32□□□□□ -0.92
PHGDH-201ENST00000369407 CRYGDP07320 174 aa9.32□□□□□ -0.92
PHGDH-201ENST00000369407 RNASE4P34096 147 aaKnown RBP9.32□□□□□ -0.92
PHGDH-201ENST00000369407 UBE2D1P51668 147 aa9.32□□□□□ -0.92
PHGDH-201ENST00000369407 TSPEAR-AS2P59090 65 aa9.32□□□□□ -0.92
PHGDH-201ENST00000369407 RPL11P62913 178 aaKnown RBP9.32□□□□□ -0.92
PHGDH-201ENST00000369407 METTL26Q96S19 204 aa9.32□□□□□ -0.92
PHGDH-201ENST00000369407 BEX4Q9NWD9 120 aaPredicted RBP9.32□□□□□ -0.92
PHGDH-201ENST00000369407 CD7P09564 240 aa9.32□□□□□ -0.92
PHGDH-201ENST00000369407 IFITM1P13164 125 aa9.32□□□□□ -0.92
PHGDH-201ENST00000369407 ZFP36P26651 326 aaKnown RBP9.32□□□□□ -0.92
PHGDH-201ENST00000369407 NDUFA11Q86Y39 141 aa9.32□□□□□ -0.92
PHGDH-201ENST00000369407 Q8N6K4 173 aa9.32□□□□□ -0.92
PHGDH-201ENST00000369407 IGHV3-64A0A075B6Q5 118 aa9.31□□□□□ -0.92
PHGDH-201ENST00000369407 COX6B1P14854 86 aa9.31□□□□□ -0.92
PHGDH-201ENST00000369407 TMEM170BQ5T4T1 132 aa9.31□□□□□ -0.92
PHGDH-201ENST00000369407 TSHBP01222 138 aa9.31□□□□□ -0.92
PHGDH-201ENST00000369407 TP53TG1Q9Y2A0 90 aa9.31□□□□□ -0.92
PHGDH-201ENST00000369407 CRIP2P52943 208 aaPredicted RBP9.3□□□□□ -0.92
PHGDH-201ENST00000369407 C9orf47Q6ZRZ4 202 aa9.3□□□□□ -0.92
PHGDH-201ENST00000369407 TEN1Q86WV5 123 aa9.3□□□□□ -0.92
PHGDH-201ENST00000369407 A0A0J9YY99 117 aa9.3□□□□□ -0.92
PHGDH-201ENST00000369407 CFC1BP0CG36 223 aa9.3□□□□□ -0.92
PHGDH-201ENST00000369407 CFC1P0CG37 223 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms