RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 IGHV4-30-4P0DP06 118 aa6.45□□□□□ -1.38
SNX27-201ENST00000368838 HBBP68871 147 aa6.45□□□□□ -1.38
SNX27-201ENST00000368838 RIGQ13278 110 aa6.45□□□□□ -1.38
SNX27-201ENST00000368838 ODF3L2Q3SX64 289 aa6.45□□□□□ -1.38
SNX27-201ENST00000368838 TMEM136Q6ZRR5 245 aa6.45□□□□□ -1.38
SNX27-201ENST00000368838 LINC00469Q8N7U9 141 aa6.45□□□□□ -1.38
SNX27-201ENST00000368838 PTH2Q96A98 100 aa6.45□□□□□ -1.38
SNX27-201ENST00000368838 SELENOKQ9Y6D0 94 aa6.45□□□□□ -1.38
SNX27-201ENST00000368838 C7orf71A4D174 169 aa6.44□□□□□ -1.38
SNX27-201ENST00000368838 GPX1P07203 203 aa6.44□□□□□ -1.38
SNX27-201ENST00000368838 DEFB131AP59861 70 aa6.44□□□□□ -1.38
SNX27-201ENST00000368838 CACNG7P62955 275 aa6.44□□□□□ -1.38
SNX27-201ENST00000368838 NDUFAF3Q9BU61 184 aa6.44□□□□□ -1.38
SNX27-201ENST00000368838 C11orf21Q9P2W6 132 aa6.44□□□□□ -1.38
SNX27-201ENST00000368838 C5orf52A6NGY3 159 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 OR11H12B2RN74 326 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 F6UB75 175 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 HIST1H2BKO60814 126 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 NXPH4O95158 308 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 CA1P00915 261 aaPredicted RBP6.43□□□□□ -1.38
SNX27-201ENST00000368838 HIST1H2BJP06899 126 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 HIST1H2BOP23527 126 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 HIST1H2BBP33778 126 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 HIST1H2BDP58876 126 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 HIST1H2BCP62807 126 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 Q0VG73 95 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 HIST2H2BEQ16778 126 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.43□□□□□ -1.38
SNX27-201ENST00000368838 GDF5OSQ5U4N7 250 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 TRPT1Q86TN4 253 aaKnown RBP6.43□□□□□ -1.38
SNX27-201ENST00000368838 DEFB125Q8N687 156 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.43□□□□□ -1.38
SNX27-201ENST00000368838 FER1L6-AS1Q8NA97 138 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 HIST1H2BHQ93079 126 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 BORCS7Q96B45 105 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 HIST1H2BNQ99877 126 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 HIST1H2BMQ99879 126 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 TM2D3Q9BRN9 247 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 TMEM191AQ9H0A3 160 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 RETNQ9HD89 108 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 TRAPPC1Q9Y5R8 145 aa6.43□□□□□ -1.38
SNX27-201ENST00000368838 BIRC6Q9NR09 4857 aa6.42□□□□□ -1.38
SNX27-201ENST00000368838 PLECQ15149 4684 aaKnown RBP6.42□□□□□ -1.38
SNX27-201ENST00000368838 IGKV3-7A0A075B6H7 116 aa6.42□□□□□ -1.38
SNX27-201ENST00000368838 LCE6AA0A183 80 aa6.42□□□□□ -1.38
SNX27-201ENST00000368838 SNURFLB1AK76 121 aa6.42□□□□□ -1.38
SNX27-201ENST00000368838 CRXO43186 299 aaPredicted RBP6.42□□□□□ -1.38
SNX27-201ENST00000368838 ORM1P02763 201 aa6.42□□□□□ -1.38
SNX27-201ENST00000368838 ESDP10768 282 aa6.42□□□□□ -1.38
SNX27-201ENST00000368838 NUTF2P61970 127 aaKnown RBP6.42□□□□□ -1.38
SNX27-201ENST00000368838 ANXA2RQ3ZCQ2 193 aa6.42□□□□□ -1.38
SNX27-201ENST00000368838 OR10J3Q5JRS4 329 aa6.42□□□□□ -1.38
SNX27-201ENST00000368838 PRR9Q5T870 116 aa6.42□□□□□ -1.38
SNX27-201ENST00000368838 MORN3Q6PF18 240 aaPredicted RBP6.42□□□□□ -1.38
SNX27-201ENST00000368838 TMEM256Q8N2U0 113 aa6.42□□□□□ -1.38
SNX27-201ENST00000368838 PACRGQ96M98 296 aaPredicted RBP6.42□□□□□ -1.38
SNX27-201ENST00000368838 CHTOPQ9Y3Y2 248 aaKnown RBP6.42□□□□□ -1.38
SNX27-201ENST00000368838 ALMS1Q8TCU4 4167 aa6.42□□□□□ -1.38
SNX27-201ENST00000368838 PPBPP02775 128 aa6.41□□□□□ -1.38
SNX27-201ENST00000368838 TRGC1P0CF51 173 aa6.41□□□□□ -1.38
SNX27-201ENST00000368838 TFPI2P48307 235 aa6.41□□□□□ -1.38
SNX27-201ENST00000368838 GFI1BQ5VTD9 330 aa6.41□□□□□ -1.38
SNX27-201ENST00000368838 LYZL1Q6UWQ5 148 aa6.41□□□□□ -1.38
SNX27-201ENST00000368838 PET117Q6UWS5 81 aa6.41□□□□□ -1.38
SNX27-201ENST00000368838 FAM159AQ6UWV7 190 aa6.41□□□□□ -1.38
SNX27-201ENST00000368838 C1QTNF4Q9BXJ3 329 aa6.41□□□□□ -1.38
SNX27-201ENST00000368838 EDA2RQ9HAV5 297 aa6.41□□□□□ -1.38
SNX27-201ENST00000368838 LAMTOR2Q9Y2Q5 125 aa6.41□□□□□ -1.38
SNX27-201ENST00000368838 TRGV11A0A075B6L2 103 aa6.4□□□□□ -1.39
SNX27-201ENST00000368838 IGHV1OR15-1A0A075B7D0 117 aa6.4□□□□□ -1.39
SNX27-201ENST00000368838 S100A6P06703 90 aa6.4□□□□□ -1.39
SNX27-201ENST00000368838 ARMS2P0C7Q2 107 aa6.4□□□□□ -1.39
SNX27-201ENST00000368838 ZNF705DP0CH99 300 aaPredicted RBP6.4□□□□□ -1.39
SNX27-201ENST00000368838 ZNF705BP0CI00 300 aaPredicted RBP6.4□□□□□ -1.39
SNX27-201ENST00000368838 HOXA5P20719 270 aa6.4□□□□□ -1.39
SNX27-201ENST00000368838 ASIPP42127 132 aa6.4□□□□□ -1.39
SNX27-201ENST00000368838 TCL1AP56279 114 aa6.4□□□□□ -1.39
SNX27-201ENST00000368838 FABP9Q0Z7S8 132 aa6.4□□□□□ -1.39
SNX27-201ENST00000368838 XP32Q5T750 250 aa6.4□□□□□ -1.39
SNX27-201ENST00000368838 POM121L12Q8N7R1 296 aa6.4□□□□□ -1.39
SNX27-201ENST00000368838 PGLYRP4Q96LB8 373 aa6.4□□□□□ -1.39
SNX27-201ENST00000368838 C9orf85Q96MD7 179 aa6.4□□□□□ -1.39
SNX27-201ENST00000368838 WFDC10AQ9H1F0 79 aa6.4□□□□□ -1.39
SNX27-201ENST00000368838 RBMY1BA6NDE4 496 aaKnown RBP6.39□□□□□ -1.39
SNX27-201ENST00000368838 RBMY1EA6NEQ0 496 aaKnown RBP6.39□□□□□ -1.39
SNX27-201ENST00000368838 APCSP02743 223 aa6.39□□□□□ -1.39
SNX27-201ENST00000368838 RBMY1DP0C7P1 496 aaKnown RBP6.39□□□□□ -1.39
SNX27-201ENST00000368838 RNASE3P12724 160 aaKnown RBP6.39□□□□□ -1.39
SNX27-201ENST00000368838 RNASE4P34096 147 aaKnown RBP6.39□□□□□ -1.39
SNX27-201ENST00000368838 DEFB1P60022 68 aa6.39□□□□□ -1.39
SNX27-201ENST00000368838 FAM104BQ5XKR9 115 aa6.39□□□□□ -1.39
SNX27-201ENST00000368838 MRPL54Q6P161 138 aaKnown RBP6.39□□□□□ -1.39
SNX27-201ENST00000368838 SPATA25Q9BR10 227 aa6.39□□□□□ -1.39
SNX27-201ENST00000368838 A0A087WWL8 130 aa6.38□□□□□ -1.39
SNX27-201ENST00000368838 LOC102724200A0A096LPH7 203 aaPredicted RBP6.38□□□□□ -1.39
SNX27-201ENST00000368838 IGHV3-16A0A0C4DH30 117 aa6.38□□□□□ -1.39
SNX27-201ENST00000368838 KIR2DL5BA0A0G2JN68 375 aa6.38□□□□□ -1.39
SNX27-201ENST00000368838 KIR2DL5BA0A0G2JPC4 375 aa6.38□□□□□ -1.39
SNX27-201ENST00000368838 LOC105371267A0A1B0GV96 52 aa6.38□□□□□ -1.39
SNX27-201ENST00000368838 A4D1N5 150 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms