RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 SH2D1AO60880 128 aa6.49□□□□□ -1.37
TPM3-213ENST00000368545 MT-ND6P03923 174 aa6.49□□□□□ -1.37
TPM3-213ENST00000368545 PRB4P10163 310 aaPredicted RBP6.49□□□□□ -1.37
TPM3-213ENST00000368545 CRIP1P50238 77 aa6.49□□□□□ -1.37
TPM3-213ENST00000368545 TCL1AP56279 114 aa6.49□□□□□ -1.37
TPM3-213ENST00000368545 RPS20P60866 119 aaKnown RBP6.49□□□□□ -1.37
TPM3-213ENST00000368545 ACTL10Q5JWF8 245 aa6.49□□□□□ -1.37
TPM3-213ENST00000368545 ADAMTSL5Q6ZMM2 481 aa6.49□□□□□ -1.37
TPM3-213ENST00000368545 FOXA3P55318 350 aaPredicted RBP6.48□□□□□ -1.37
TPM3-213ENST00000368545 HIST1H1AQ02539 215 aaPredicted RBP6.48□□□□□ -1.37
TPM3-213ENST00000368545 ZFP82Q8N141 532 aa6.48□□□□□ -1.37
TPM3-213ENST00000368545 NUP35Q8NFH5 326 aa6.48□□□□□ -1.37
TPM3-213ENST00000368545 GNB1LQ9BYB4 327 aa6.48□□□□□ -1.37
TPM3-213ENST00000368545 TRAV25A0A0B4J276 109 aa6.47□□□□□ -1.37
TPM3-213ENST00000368545 IGLV5-39A0A0G2JS06 123 aa6.47□□□□□ -1.37
TPM3-213ENST00000368545 TMEM189A5PLL7 270 aa6.47□□□□□ -1.37
TPM3-213ENST00000368545 ZNF688P0C7X2 276 aa6.47□□□□□ -1.37
TPM3-213ENST00000368545 MPLKIPQ8TAP9 179 aa6.47□□□□□ -1.37
TPM3-213ENST00000368545 PHLDA1Q8WV24 401 aaPredicted RBP6.47□□□□□ -1.37
TPM3-213ENST00000368545 TRAPPC1Q9Y5R8 145 aa6.47□□□□□ -1.37
TPM3-213ENST00000368545 PHOX2AO14813 284 aa6.47□□□□□ -1.37
TPM3-213ENST00000368545 HLA-DQA1P01909 254 aa6.47□□□□□ -1.37
TPM3-213ENST00000368545 TFPI2P48307 235 aa6.47□□□□□ -1.37
TPM3-213ENST00000368545 PSMG4Q5JS54 123 aa6.47□□□□□ -1.37
TPM3-213ENST00000368545 EBLN2Q6P2I7 272 aa6.47□□□□□ -1.37
TPM3-213ENST00000368545 PRSS3P2Q8NHM4 247 aa6.47□□□□□ -1.37
TPM3-213ENST00000368545 MUC7Q8TAX7 377 aa6.47□□□□□ -1.37
TPM3-213ENST00000368545 GTSF1Q8WW33 167 aa6.47□□□□□ -1.37
TPM3-213ENST00000368545 FAM19A4Q96LR4 140 aa6.47□□□□□ -1.37
TPM3-213ENST00000368545 ODF3Q96PU9 254 aa6.47□□□□□ -1.37
TPM3-213ENST00000368545 OR4C46A6NHA9 309 aa6.46□□□□□ -1.37
TPM3-213ENST00000368545 SNURFLB1AK76 121 aa6.46□□□□□ -1.37
TPM3-213ENST00000368545 DUSP14O95147 198 aaKnown RBP6.46□□□□□ -1.37
TPM3-213ENST00000368545 CRISP2P16562 243 aa6.46□□□□□ -1.37
TPM3-213ENST00000368545 ZNF80P51504 273 aaPredicted RBP6.46□□□□□ -1.37
TPM3-213ENST00000368545 DEFB114Q30KQ6 69 aa6.46□□□□□ -1.37
TPM3-213ENST00000368545 MRPL54Q6P161 138 aaKnown RBP6.46□□□□□ -1.37
TPM3-213ENST00000368545 FOXI2Q6ZQN5 318 aa6.46□□□□□ -1.37
TPM3-213ENST00000368545 TMEM61Q8N0U2 210 aa6.46□□□□□ -1.37
TPM3-213ENST00000368545 MAPKAPK5-AS1Q8N8E1 139 aa6.46□□□□□ -1.37
TPM3-213ENST00000368545 FRZBQ92765 325 aa6.46□□□□□ -1.37
TPM3-213ENST00000368545 SELENOKQ9Y6D0 94 aa6.46□□□□□ -1.37
TPM3-213ENST00000368545 IGLV5-52A0A0A0MRZ9 124 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 A0A0J9YX75 114 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 A0A1B0GW15 77 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 HIST1H2BKO60814 126 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 HIST1H2BJP06899 126 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 TRGC1P0CF51 173 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 ZNF705DP0CH99 300 aaPredicted RBP6.46□□□□□ -1.38
TPM3-213ENST00000368545 ZNF705BP0CI00 300 aaPredicted RBP6.46□□□□□ -1.38
TPM3-213ENST00000368545 HIST1H2BOP23527 126 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 HIST1H2BBP33778 126 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 HIST1H2BDP58876 126 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 HIST1H2BCP62807 126 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 HBBP68871 147 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 HIST2H2BEQ16778 126 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 NSUN5P1Q3KNT7 163 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 KRTAP19-4Q3LI73 84 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.46□□□□□ -1.38
TPM3-213ENST00000368545 APRG1Q8IVJ8 170 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 HIST1H2BHQ93079 126 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 BORCS7Q96B45 105 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 HIST1H2BNQ99877 126 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 HIST1H2BMQ99879 126 aa6.46□□□□□ -1.38
TPM3-213ENST00000368545 TRAV21A0A0B4J279 112 aa6.45□□□□□ -1.38
TPM3-213ENST00000368545 A0A1B0GXF2 115 aa6.45□□□□□ -1.38
TPM3-213ENST00000368545 F6UB75 175 aa6.45□□□□□ -1.38
TPM3-213ENST00000368545 SPINK4O60575 86 aa6.45□□□□□ -1.38
TPM3-213ENST00000368545 S100A8P05109 93 aa6.45□□□□□ -1.38
TPM3-213ENST00000368545 FABP9Q0Z7S8 132 aa6.45□□□□□ -1.38
TPM3-213ENST00000368545 TMEM136Q6ZRR5 245 aa6.45□□□□□ -1.38
TPM3-213ENST00000368545 ZFAND2AQ8N6M9 145 aa6.45□□□□□ -1.38
TPM3-213ENST00000368545 PRR26Q8N8Z3 221 aa6.45□□□□□ -1.38
TPM3-213ENST00000368545 OR2K2Q8NGT1 345 aa6.45□□□□□ -1.38
TPM3-213ENST00000368545 PGLYRP4Q96LB8 373 aa6.45□□□□□ -1.38
TPM3-213ENST00000368545 A0A1B0GUT8 65 aa6.44□□□□□ -1.38
TPM3-213ENST00000368545 HSBP1L1C9JCN9 74 aa6.44□□□□□ -1.38
TPM3-213ENST00000368545 ORM1P02763 201 aa6.44□□□□□ -1.38
TPM3-213ENST00000368545 GPX1P07203 203 aa6.44□□□□□ -1.38
TPM3-213ENST00000368545 GZMBP10144 247 aa6.44□□□□□ -1.38
TPM3-213ENST00000368545 G0S2P27469 103 aa6.44□□□□□ -1.38
TPM3-213ENST00000368545 LEPP41159 167 aa6.44□□□□□ -1.38
TPM3-213ENST00000368545 RAB4BP61018 213 aa6.44□□□□□ -1.38
TPM3-213ENST00000368545 CASC10Q5T4H9 136 aa6.44□□□□□ -1.38
TPM3-213ENST00000368545 KLLNB2CW77 178 aa6.44□□□□□ -1.38
TPM3-213ENST00000368545 CTRLP40313 264 aa6.44□□□□□ -1.38
TPM3-213ENST00000368545 KRTAP10-3P60369 221 aa6.44□□□□□ -1.38
TPM3-213ENST00000368545 RIGQ13278 110 aa6.44□□□□□ -1.38
TPM3-213ENST00000368545 FER1L6-AS1Q8NA97 138 aa6.44□□□□□ -1.38
TPM3-213ENST00000368545 SAP30O75446 220 aa6.43□□□□□ -1.38
TPM3-213ENST00000368545 TSPOP30536 169 aa6.43□□□□□ -1.38
TPM3-213ENST00000368545 DEFB1P60022 68 aa6.43□□□□□ -1.38
TPM3-213ENST00000368545 TMSB15BA0A087X1C1 80 aa6.43□□□□□ -1.38
TPM3-213ENST00000368545 F2Z2F3 143 aa6.43□□□□□ -1.38
TPM3-213ENST00000368545 IGLC6P0CF74 106 aa6.43□□□□□ -1.38
TPM3-213ENST00000368545 HLA-DRB4P13762 266 aa6.43□□□□□ -1.38
TPM3-213ENST00000368545 CMC4P56277 68 aaPredicted RBP6.43□□□□□ -1.38
TPM3-213ENST00000368545 DEFB131AP59861 70 aa6.43□□□□□ -1.38
TPM3-213ENST00000368545 PRR9Q5T870 116 aa6.43□□□□□ -1.38
TPM3-213ENST00000368545 GDF5OSQ5U4N7 250 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms