RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 ANGP03950 147 aaKnown RBP12.82□□□□□ -0.36
SCAF8-201ENST00000367178 TMEM131Q92545 1883 aa12.82□□□□□ -0.36
SCAF8-201ENST00000367178 IGHV4OR15-8A0A075B7B6 117 aa12.82□□□□□ -0.36
SCAF8-201ENST00000367178 IGKV1OR2-108A0A075B7D4 117 aa12.82□□□□□ -0.36
SCAF8-201ENST00000367178 A0A087WW49 117 aa12.82□□□□□ -0.36
SCAF8-201ENST00000367178 IGHG2P01859 326 aa12.82□□□□□ -0.36
SCAF8-201ENST00000367178 IGLL1P15814 213 aa12.82□□□□□ -0.36
SCAF8-201ENST00000367178 PLA2G5P39877 138 aa12.82□□□□□ -0.36
SCAF8-201ENST00000367178 C9orf66Q5T8R8 295 aa12.82□□□□□ -0.36
SCAF8-201ENST00000367178 PLA2G2EQ9NZK7 142 aa12.82□□□□□ -0.36
SCAF8-201ENST00000367178 PRORYQ9H606 182 aa12.82□□□□□ -0.36
SCAF8-201ENST00000367178 MRPL36Q9P0J6 103 aaKnown RBP12.81□□□□□ -0.36
SCAF8-201ENST00000367178 TLN1Q9Y490 2541 aaKnown RBP12.81□□□□□ -0.36
SCAF8-201ENST00000367178 ABCA2Q9BZC7 2435 aa12.81□□□□□ -0.36
SCAF8-201ENST00000367178 NAV3Q8IVL0 2385 aa12.81□□□□□ -0.36
SCAF8-201ENST00000367178 WI2-2373I1.2A0A1W2PRP0 233 aa12.8□□□□□ -0.36
SCAF8-201ENST00000367178 F8WEM9 126 aa12.8□□□□□ -0.36
SCAF8-201ENST00000367178 NXPH4O95158 308 aa12.8□□□□□ -0.36
SCAF8-201ENST00000367178 RNASE13Q5GAN3 156 aaKnown RBP12.8□□□□□ -0.36
SCAF8-201ENST00000367178 A0A0J9YY99 117 aa12.79□□□□□ -0.36
SCAF8-201ENST00000367178 COX8AP10176 69 aa12.79□□□□□ -0.36
SCAF8-201ENST00000367178 C22orf34Q6ZV56 151 aa12.79□□□□□ -0.36
SCAF8-201ENST00000367178 C9JAW5 83 aa12.79□□□□□ -0.36
SCAF8-201ENST00000367178 LMO4P61968 165 aa12.79□□□□□ -0.36
SCAF8-201ENST00000367178 KLF5Q13887 457 aaPredicted RBP12.79□□□□□ -0.36
SCAF8-201ENST00000367178 ZNF106Q9H2Y7 1883 aaKnown RBP12.79□□□□□ -0.36
SCAF8-201ENST00000367178 C2orf70A6NJV1 201 aa12.79□□□□□ -0.36
SCAF8-201ENST00000367178 K7EMT4 169 aa12.79□□□□□ -0.36
SCAF8-201ENST00000367178 HERVK_113P63121 156 aa12.79□□□□□ -0.36
SCAF8-201ENST00000367178 ZMAT4Q9H898 229 aa12.79□□□□□ -0.36
SCAF8-201ENST00000367178 CGB3P0DN86 165 aa12.79□□□□□ -0.36
SCAF8-201ENST00000367178 CGB7P0DN87 165 aa12.79□□□□□ -0.36
SCAF8-201ENST00000367178 GATA1P15976 413 aaPredicted RBP12.78□□□□□ -0.36
SCAF8-201ENST00000367178 C19orf84I3L1E1 186 aa12.78□□□□□ -0.36
SCAF8-201ENST00000367178 RNF152Q8N8N0 203 aa12.78□□□□□ -0.36
SCAF8-201ENST00000367178 DNAJC30Q96LL9 226 aa12.78□□□□□ -0.36
SCAF8-201ENST00000367178 GPHB5Q86YW7 130 aa12.78□□□□□ -0.36
SCAF8-201ENST00000367178 PIFOQ8TCI5 191 aa12.78□□□□□ -0.36
SCAF8-201ENST00000367178 DKK2Q9UBU2 259 aa12.78□□□□□ -0.36
SCAF8-201ENST00000367178 KLF12Q9Y4X4 402 aa12.78□□□□□ -0.36
SCAF8-201ENST00000367178 J3QQQ9 107 aa12.77□□□□□ -0.36
SCAF8-201ENST00000367178 MRAPQ8TCY5 172 aa12.77□□□□□ -0.36
SCAF8-201ENST00000367178 PRAC2D3DTV9 90 aa12.77□□□□□ -0.37
SCAF8-201ENST00000367178 K7EMI3 77 aa12.77□□□□□ -0.37
SCAF8-201ENST00000367178 ADAMTSL5Q6ZMM2 481 aa12.77□□□□□ -0.37
SCAF8-201ENST00000367178 ZNF747Q9BV97 191 aa12.77□□□□□ -0.37
SCAF8-201ENST00000367178 PROP1O75360 226 aa12.77□□□□□ -0.37
SCAF8-201ENST00000367178 CLPSL2Q6UWE3 100 aa12.77□□□□□ -0.37
SCAF8-201ENST00000367178 MED12LQ86YW9 2145 aa12.77□□□□□ -0.37
SCAF8-201ENST00000367178 FANCD2OSQ96PS1 177 aa12.77□□□□□ -0.37
SCAF8-201ENST00000367178 TMEM89A2RUT3 159 aa12.77□□□□□ -0.37
SCAF8-201ENST00000367178 PRSS29PA6NIE9 313 aa12.77□□□□□ -0.37
SCAF8-201ENST00000367178 KMT2EQ8IZD2 1858 aa12.77□□□□□ -0.37
SCAF8-201ENST00000367178 MSRB1Q9NZV6 116 aa12.76□□□□□ -0.37
SCAF8-201ENST00000367178 SPINK8P0C7L1 97 aa12.76□□□□□ -0.37
SCAF8-201ENST00000367178 RMI2Q96E14 147 aa12.76□□□□□ -0.37
SCAF8-201ENST00000367178 MYO9AB2RTY4 2548 aa12.76□□□□□ -0.37
SCAF8-201ENST00000367178 NACAE9PAV3 2078 aa12.76□□□□□ -0.37
SCAF8-201ENST00000367178 SORL1Q92673 2214 aa12.76□□□□□ -0.37
SCAF8-201ENST00000367178 PCNX3Q9H6A9 2034 aa12.75□□□□□ -0.37
SCAF8-201ENST00000367178 A6NDX4 124 aa12.75□□□□□ -0.37
SCAF8-201ENST00000367178 LINC00574Q9H8X3 128 aa12.75□□□□□ -0.37
SCAF8-201ENST00000367178 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.75□□□□□ -0.37
SCAF8-201ENST00000367178 IGKV2-29A2NJV5 120 aaPredicted RBP12.75□□□□□ -0.37
SCAF8-201ENST00000367178 LOXL1Q08397 574 aaPredicted RBP12.75□□□□□ -0.37
SCAF8-201ENST00000367178 NKAPP1Q8N9T2 125 aa12.75□□□□□ -0.37
SCAF8-201ENST00000367178 CDPF1Q6NVV7 123 aa12.75□□□□□ -0.37
SCAF8-201ENST00000367178 CHD3Q12873 2000 aaKnown RBP12.74□□□□□ -0.37
SCAF8-201ENST00000367178 RPL39LQ96EH5 51 aaKnown RBP12.74□□□□□ -0.37
SCAF8-201ENST00000367178 TNFRSF13BO14836 293 aaPredicted RBP12.73□□□□□ -0.37
SCAF8-201ENST00000367178 C16orf74Q96GX8 76 aa12.73□□□□□ -0.37
SCAF8-201ENST00000367178 P0C879 139 aa12.73□□□□□ -0.37
SCAF8-201ENST00000367178 SUMO4Q6EEV6 95 aa12.73□□□□□ -0.37
SCAF8-201ENST00000367178 Q6ZPA2 131 aa12.73□□□□□ -0.37
SCAF8-201ENST00000367178 KIAA1549LQ6ZVL6 1849 aa12.73□□□□□ -0.37
SCAF8-201ENST00000367178 C9orf47Q6ZRZ4 202 aa12.72□□□□□ -0.37
SCAF8-201ENST00000367178 HIST1H4AP62805 103 aaKnown RBP12.72□□□□□ -0.37
SCAF8-201ENST00000367178 ZNF48Q96MX3 618 aaPredicted RBP12.72□□□□□ -0.37
SCAF8-201ENST00000367178 ODF3BA8MYP8 253 aa12.72□□□□□ -0.37
SCAF8-201ENST00000367178 MYCNOSP40205 109 aa12.72□□□□□ -0.37
SCAF8-201ENST00000367178 XCL1P47992 114 aa12.72□□□□□ -0.37
SCAF8-201ENST00000367178 UTF1Q5T230 341 aa12.72□□□□□ -0.37
SCAF8-201ENST00000367178 UNQ9165/PRO28630Q6UXU0 137 aa12.72□□□□□ -0.37
SCAF8-201ENST00000367178 TRBV20-1A0A075B6N2 111 aa12.71□□□□□ -0.37
SCAF8-201ENST00000367178 CLPSL1A2RUU4 121 aa12.71□□□□□ -0.37
SCAF8-201ENST00000367178 CRIP3Q6Q6R5 217 aa12.71□□□□□ -0.37
SCAF8-201ENST00000367178 C11orf1Q9H5F2 150 aa12.71□□□□□ -0.37
SCAF8-201ENST00000367178 TRBV12-3P01733 135 aa12.71□□□□□ -0.37
SCAF8-201ENST00000367178 TRAV25A0A0B4J276 109 aa12.71□□□□□ -0.38
SCAF8-201ENST00000367178 SPART-AS1P0CW21 52 aa12.71□□□□□ -0.38
SCAF8-201ENST00000367178 Q8N1Y9 231 aa12.71□□□□□ -0.38
SCAF8-201ENST00000367178 COL4A4P53420 1690 aaPredicted RBP12.71□□□□□ -0.38
SCAF8-201ENST00000367178 DEFB1P60022 68 aa12.7□□□□□ -0.38
SCAF8-201ENST00000367178 Q6ZQT7 251 aa12.7□□□□□ -0.38
SCAF8-201ENST00000367178 WDR87Q6ZQQ6 2873 aa12.7□□□□□ -0.38
SCAF8-201ENST00000367178 BRWD1-AS2P59051 145 aa12.7□□□□□ -0.38
SCAF8-201ENST00000367178 CITED2Q99967 270 aaPredicted RBP12.7□□□□□ -0.38
SCAF8-201ENST00000367178 SPANXA1Q9NS26 97 aa12.7□□□□□ -0.38
SCAF8-201ENST00000367178 ATP5G1P05496 136 aa12.7□□□□□ -0.38
SCAF8-201ENST00000367178 COA6Q5JTJ3 125 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms