RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 MYMXA0A1B0GTQ4 84 aa12.66□□□□□ -0.38
SCAF1-201ENST00000360565 MLST8Q9BVC4 326 aa12.66□□□□□ -0.38
SCAF1-201ENST00000360565 A0A1B0GXF2 115 aa12.66□□□□□ -0.38
SCAF1-201ENST00000360565 MORN3Q6PF18 240 aaPredicted RBP12.66□□□□□ -0.38
SCAF1-201ENST00000360565 K7ERJ3 54 aa12.66□□□□□ -0.38
SCAF1-201ENST00000360565 C5orf56Q8N8D9 126 aa12.66□□□□□ -0.38
SCAF1-201ENST00000360565 GTSF1LQ9H1H1 148 aa12.66□□□□□ -0.38
SCAF1-201ENST00000360565 DEFB125Q8N687 156 aa12.65□□□□□ -0.38
SCAF1-201ENST00000360565 AJUBAQ96IF1 538 aa12.65□□□□□ -0.38
SCAF1-201ENST00000360565 A0A087WX48 190 aa12.65□□□□□ -0.38
SCAF1-201ENST00000360565 H3BUA1 57 aa12.65□□□□□ -0.38
SCAF1-201ENST00000360565 ETDBQ3ZM63 59 aa12.65□□□□□ -0.38
SCAF1-201ENST00000360565 DEFB1P60022 68 aa12.65□□□□□ -0.38
SCAF1-201ENST00000360565 TMEM141Q96I45 108 aa12.65□□□□□ -0.38
SCAF1-201ENST00000360565 CPAMD8Q8IZJ3 1885 aa12.65□□□□□ -0.39
SCAF1-201ENST00000360565 MBD6Q96DN6 1003 aa12.64□□□□□ -0.39
SCAF1-201ENST00000360565 PRSS29PA6NIE9 313 aa12.64□□□□□ -0.39
SCAF1-201ENST00000360565 C2orf70A6NJV1 201 aa12.64□□□□□ -0.39
SCAF1-201ENST00000360565 I3L3M4 83 aa12.64□□□□□ -0.39
SCAF1-201ENST00000360565 K7EP13 123 aa12.64□□□□□ -0.39
SCAF1-201ENST00000360565 ZNF625Q96I27 306 aaPredicted RBP12.64□□□□□ -0.39
SCAF1-201ENST00000360565 RPL39LQ96EH5 51 aaKnown RBP12.64□□□□□ -0.39
SCAF1-201ENST00000360565 SIRPDQ9H106 197 aa12.64□□□□□ -0.39
SCAF1-201ENST00000360565 LINC01619G3V211 115 aa12.63□□□□□ -0.39
SCAF1-201ENST00000360565 TTTY13Q9BZ97 58 aa12.63□□□□□ -0.39
SCAF1-201ENST00000360565 TP53TG3Q9ULZ0 132 aa12.63□□□□□ -0.39
SCAF1-201ENST00000360565 CCL25O15444 150 aa12.63□□□□□ -0.39
SCAF1-201ENST00000360565 SCGB1A1P11684 91 aa12.63□□□□□ -0.39
SCAF1-201ENST00000360565 Q96MF0 132 aa12.63□□□□□ -0.39
SCAF1-201ENST00000360565 RHODO00212 210 aa12.63□□□□□ -0.39
SCAF1-201ENST00000360565 TSPAN13O95857 204 aa12.63□□□□□ -0.39
SCAF1-201ENST00000360565 LINC00158P58513 81 aa12.63□□□□□ -0.39
SCAF1-201ENST00000360565 C16orf54Q6UWD8 224 aa12.63□□□□□ -0.39
SCAF1-201ENST00000360565 ELANEP08246 267 aa12.62□□□□□ -0.39
SCAF1-201ENST00000360565 LAMA2P24043 3122 aaKnown RBP12.62□□□□□ -0.39
SCAF1-201ENST00000360565 A0A1W2PPM0 123 aa12.62□□□□□ -0.39
SCAF1-201ENST00000360565 SIVA1O15304 175 aa12.62□□□□□ -0.39
SCAF1-201ENST00000360565 ZNF493Q6ZR52 646 aa12.62□□□□□ -0.39
SCAF1-201ENST00000360565 IGHV3-38A0A0C4DH36 116 aa12.62□□□□□ -0.39
SCAF1-201ENST00000360565 K7EP34 96 aa12.62□□□□□ -0.39
SCAF1-201ENST00000360565 CMC4P56277 68 aaPredicted RBP12.62□□□□□ -0.39
SCAF1-201ENST00000360565 CFAP161Q6P656 301 aa12.62□□□□□ -0.39
SCAF1-201ENST00000360565 CTRLP40313 264 aa12.61□□□□□ -0.39
SCAF1-201ENST00000360565 ABCA12Q86UK0 2595 aa12.61□□□□□ -0.39
SCAF1-201ENST00000360565 TRBV25-1A0A075B6N4 114 aa12.61□□□□□ -0.39
SCAF1-201ENST00000360565 AMTNQ6UX39 209 aa12.61□□□□□ -0.39
SCAF1-201ENST00000360565 PRIMA1Q86XR5 153 aa12.61□□□□□ -0.39
SCAF1-201ENST00000360565 CEND1Q8N111 149 aa12.61□□□□□ -0.39
SCAF1-201ENST00000360565 NRGNQ92686 78 aa12.61□□□□□ -0.39
SCAF1-201ENST00000360565 ATP6V0BQ99437 205 aa12.61□□□□□ -0.39
SCAF1-201ENST00000360565 SCRT2Q9NQ03 307 aa12.61□□□□□ -0.39
SCAF1-201ENST00000360565 TRBV6-1A0A0K0K1D8 114 aa12.61□□□□□ -0.39
SCAF1-201ENST00000360565 LINC01548A6NM66 108 aa12.61□□□□□ -0.39
SCAF1-201ENST00000360565 J3QLI3 93 aa12.61□□□□□ -0.39
SCAF1-201ENST00000360565 HOXD3P31249 432 aaPredicted RBP12.61□□□□□ -0.39
SCAF1-201ENST00000360565 RASL10AQ92737 203 aa12.61□□□□□ -0.39
SCAF1-201ENST00000360565 ZNF80P51504 273 aaPredicted RBP12.6□□□□□ -0.39
SCAF1-201ENST00000360565 LOXL1Q08397 574 aaPredicted RBP12.6□□□□□ -0.39
SCAF1-201ENST00000360565 DEFB136Q30KP8 78 aa12.6□□□□□ -0.39
SCAF1-201ENST00000360565 C10orf105Q8TEF2 133 aa12.6□□□□□ -0.39
SCAF1-201ENST00000360565 ZNF48Q96MX3 618 aaPredicted RBP12.6□□□□□ -0.39
SCAF1-201ENST00000360565 C9JAW5 83 aa12.6□□□□□ -0.39
SCAF1-201ENST00000360565 CRYGBP07316 175 aa12.6□□□□□ -0.39
SCAF1-201ENST00000360565 DEFB130BP0DP73 79 aa12.59□□□□□ -0.39
SCAF1-201ENST00000360565 DEFB130AP0DP74 79 aa12.59□□□□□ -0.39
SCAF1-201ENST00000360565 H3BMG7 143 aa12.59□□□□□ -0.39
SCAF1-201ENST00000360565 UNQ9165/PRO28630Q6UXU0 137 aa12.59□□□□□ -0.39
SCAF1-201ENST00000360565 GAGE12JA6NER3 117 aa12.58□□□□□ -0.39
SCAF1-201ENST00000360565 ODF3BA8MYP8 253 aa12.58□□□□□ -0.39
SCAF1-201ENST00000360565 MALP21145 153 aa12.58□□□□□ -0.39
SCAF1-201ENST00000360565 GAGE4Q13068 117 aa12.58□□□□□ -0.39
SCAF1-201ENST00000360565 GAGE5Q13069 117 aa12.58□□□□□ -0.39
SCAF1-201ENST00000360565 C1QTNF4Q9BXJ3 329 aa12.58□□□□□ -0.39
SCAF1-201ENST00000360565 C11orf68Q9H3H3 251 aaKnown RBP12.58□□□□□ -0.39
SCAF1-201ENST00000360565 VPREB3Q9UKI3 123 aa12.58□□□□□ -0.4
SCAF1-201ENST00000360565 EXPH5Q8NEV8 1989 aa12.58□□□□□ -0.4
SCAF1-201ENST00000360565 RBMY1BA6NDE4 496 aaKnown RBP12.58□□□□□ -0.4
SCAF1-201ENST00000360565 RBMY1EA6NEQ0 496 aaKnown RBP12.58□□□□□ -0.4
SCAF1-201ENST00000360565 J3QQQ9 107 aa12.58□□□□□ -0.4
SCAF1-201ENST00000360565 RBMY1DP0C7P1 496 aaKnown RBP12.58□□□□□ -0.4
SCAF1-201ENST00000360565 RBMY1A1P0DJD3 496 aaKnown RBP12.58□□□□□ -0.4
SCAF1-201ENST00000360565 RBMY1CP0DJD4 496 aa12.58□□□□□ -0.4
SCAF1-201ENST00000360565 LMO4P61968 165 aa12.58□□□□□ -0.4
SCAF1-201ENST00000360565 CFHR3Q02985 330 aa12.58□□□□□ -0.4
SCAF1-201ENST00000360565 C10orf126Q8N4M7 172 aa12.58□□□□□ -0.4
SCAF1-201ENST00000360565 ZNRF2Q8NHG8 242 aa12.58□□□□□ -0.4
SCAF1-201ENST00000360565 TRBV12-3P01733 135 aa12.58□□□□□ -0.4
SCAF1-201ENST00000360565 ATXN8Q156A1 80 aa12.58□□□□□ -0.4
SCAF1-201ENST00000360565 C9orf47Q6ZRZ4 202 aa12.58□□□□□ -0.4
SCAF1-201ENST00000360565 RNASE13Q5GAN3 156 aaKnown RBP12.57□□□□□ -0.4
SCAF1-201ENST00000360565 C12orf74Q32Q52 190 aa12.57□□□□□ -0.4
SCAF1-201ENST00000360565 C2orf82Q6UX34 121 aa12.57□□□□□ -0.4
SCAF1-201ENST00000360565 TAL2Q16559 108 aa12.56□□□□□ -0.4
SCAF1-201ENST00000360565 PAX4O43316 350 aa12.56□□□□□ -0.4
SCAF1-201ENST00000360565 COL5A1P20908 1838 aaPredicted RBP12.56□□□□□ -0.4
SCAF1-201ENST00000360565 CCDC140Q96MF4 163 aa12.56□□□□□ -0.4
SCAF1-201ENST00000360565 TRAV8-4A0A0B4J246 113 aa12.55□□□□□ -0.4
SCAF1-201ENST00000360565 MYCNOSP40205 109 aa12.55□□□□□ -0.4
SCAF1-201ENST00000360565 FOXI2Q6ZQN5 318 aa12.55□□□□□ -0.4
SCAF1-201ENST00000360565 NDUFA12Q9UI09 145 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms