RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 HIST2H2BCQ6DN03 193 aa7.38□□□□□ -1.23
VPS13A-203ENST00000360280 SPACA3Q8IXA5 215 aa7.38□□□□□ -1.23
VPS13A-203ENST00000360280 Q6ZRM9 215 aa7.38□□□□□ -1.23
VPS13A-203ENST00000360280 TMEM61Q8N0U2 210 aa7.38□□□□□ -1.23
VPS13A-203ENST00000360280 A0A0G2JNJ9 132 aa7.38□□□□□ -1.23
VPS13A-203ENST00000360280 Q9UFV3 132 aa7.38□□□□□ -1.23
VPS13A-203ENST00000360280 IGHV7-4-1A0A0J9YVY3 117 aa7.38□□□□□ -1.23
VPS13A-203ENST00000360280 FXYD5Q96DB9 178 aa7.38□□□□□ -1.23
VPS13A-203ENST00000360280 MBD3L4A6NDZ8 208 aaPredicted RBP7.38□□□□□ -1.23
VPS13A-203ENST00000360280 MBD3L3A6NE82 208 aaPredicted RBP7.38□□□□□ -1.23
VPS13A-203ENST00000360280 MBD3L5A6NJ08 208 aaPredicted RBP7.38□□□□□ -1.23
VPS13A-203ENST00000360280 UQCRQO14949 82 aa7.38□□□□□ -1.23
VPS13A-203ENST00000360280 MBD3L2Q8NHZ7 208 aaPredicted RBP7.38□□□□□ -1.23
VPS13A-203ENST00000360280 ZNF747Q9BV97 191 aa7.38□□□□□ -1.23
VPS13A-203ENST00000360280 IGKV4-1P06312 121 aa7.38□□□□□ -1.23
VPS13A-203ENST00000360280 HIGD1BQ9P298 99 aa7.38□□□□□ -1.23
VPS13A-203ENST00000360280 COX7A2LO14548 114 aa7.38□□□□□ -1.23
VPS13A-203ENST00000360280 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.38□□□□□ -1.23
VPS13A-203ENST00000360280 IGKV2-29A2NJV5 120 aaPredicted RBP7.38□□□□□ -1.23
VPS13A-203ENST00000360280 PCP2Q8IVA1 136 aa7.38□□□□□ -1.23
VPS13A-203ENST00000360280 ZFP36L1Q07352 338 aaKnown RBP7.37□□□□□ -1.23
VPS13A-203ENST00000360280 CAMK2N2Q96S95 79 aa7.37□□□□□ -1.23
VPS13A-203ENST00000360280 IGLC1P0CG04 106 aa7.37□□□□□ -1.23
VPS13A-203ENST00000360280 CASC2Q6XLA1 102 aa7.37□□□□□ -1.23
VPS13A-203ENST00000360280 MSMBP08118 114 aa7.37□□□□□ -1.23
VPS13A-203ENST00000360280 BPESC1Q9GZL8 116 aa7.37□□□□□ -1.23
VPS13A-203ENST00000360280 TIMM17AQ99595 171 aa7.37□□□□□ -1.23
VPS13A-203ENST00000360280 J3QLI3 93 aa7.36□□□□□ -1.23
VPS13A-203ENST00000360280 Q6ZUT4 128 aa7.36□□□□□ -1.23
VPS13A-203ENST00000360280 A4D1N5 150 aa7.36□□□□□ -1.23
VPS13A-203ENST00000360280 WIPF3A6NGB9 483 aa7.36□□□□□ -1.23
VPS13A-203ENST00000360280 K7EQD1 137 aa7.36□□□□□ -1.23
VPS13A-203ENST00000360280 LYPD2Q6UXB3 125 aa7.36□□□□□ -1.23
VPS13A-203ENST00000360280 H0Y9J4 135 aa7.36□□□□□ -1.23
VPS13A-203ENST00000360280 LY6DQ14210 128 aa7.36□□□□□ -1.23
VPS13A-203ENST00000360280 KLF2Q9Y5W3 355 aaPredicted RBP7.36□□□□□ -1.23
VPS13A-203ENST00000360280 USP17L23D6RBM5 183 aa7.35□□□□□ -1.23
VPS13A-203ENST00000360280 LMO1P25800 156 aa7.35□□□□□ -1.23
VPS13A-203ENST00000360280 IGKV1OR2-108A0A075B7D4 117 aa7.35□□□□□ -1.23
VPS13A-203ENST00000360280 SEM1Q6ZVN7 128 aa7.35□□□□□ -1.23
VPS13A-203ENST00000360280 NBASA2RRP1 2371 aa7.35□□□□□ -1.23
VPS13A-203ENST00000360280 NDUFC2-KCTD14E9PQ53 114 aa7.35□□□□□ -1.23
VPS13A-203ENST00000360280 LINC00205P59089 165 aa7.35□□□□□ -1.23
VPS13A-203ENST00000360280 UPK3BQ9BT76 320 aa7.35□□□□□ -1.23
VPS13A-203ENST00000360280 PINLYPA6NC86 204 aa7.35□□□□□ -1.23
VPS13A-203ENST00000360280 NOP10Q9NPE3 64 aaKnown RBP7.35□□□□□ -1.23
VPS13A-203ENST00000360280 H3BUA1 57 aa7.35□□□□□ -1.23
VPS13A-203ENST00000360280 G3V4G9 280 aa7.35□□□□□ -1.23
VPS13A-203ENST00000360280 NDUFV3P56181 108 aaKnown RBP7.35□□□□□ -1.23
VPS13A-203ENST00000360280 A0A096LPF7 62 aa7.34□□□□□ -1.23
VPS13A-203ENST00000360280 FAM236DA0A1B0GTK5 79 aa7.34□□□□□ -1.23
VPS13A-203ENST00000360280 FAM236CP0DP71 79 aa7.34□□□□□ -1.23
VPS13A-203ENST00000360280 UBE2AP49459 152 aa7.34□□□□□ -1.23
VPS13A-203ENST00000360280 RNF183Q96D59 192 aa7.34□□□□□ -1.23
VPS13A-203ENST00000360280 CSRP1P21291 193 aaKnown RBP7.34□□□□□ -1.23
VPS13A-203ENST00000360280 IGHV1-69P01742 117 aa7.34□□□□□ -1.23
VPS13A-203ENST00000360280 TRBV10-2A0A0K0K1G8 114 aa7.34□□□□□ -1.23
VPS13A-203ENST00000360280 ATP5EP2Q5VTU8 51 aa7.34□□□□□ -1.23
VPS13A-203ENST00000360280 LINC00643Q86TS7 51 aa7.34□□□□□ -1.23
VPS13A-203ENST00000360280 MPLKIPQ8TAP9 179 aa7.34□□□□□ -1.23
VPS13A-203ENST00000360280 Q9HAA7 133 aa7.34□□□□□ -1.23
VPS13A-203ENST00000360280 MLANAQ16655 118 aa7.34□□□□□ -1.23
VPS13A-203ENST00000360280 Q8TCH9 128 aa7.34□□□□□ -1.23
VPS13A-203ENST00000360280 FLVCR1-AS1Q8TAF5 88 aa7.34□□□□□ -1.23
VPS13A-203ENST00000360280 ZNF726P1Q15940 193 aa7.34□□□□□ -1.24
VPS13A-203ENST00000360280 LINC00311Q8N616 119 aa7.34□□□□□ -1.24
VPS13A-203ENST00000360280 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.33□□□□□ -1.24
VPS13A-203ENST00000360280 K7EN84 100 aa7.33□□□□□ -1.24
VPS13A-203ENST00000360280 C16orf74Q96GX8 76 aa7.33□□□□□ -1.24
VPS13A-203ENST00000360280 DIRC1Q969H9 104 aa7.33□□□□□ -1.24
VPS13A-203ENST00000360280 TRAV26-1A0A087WT03 109 aa7.33□□□□□ -1.24
VPS13A-203ENST00000360280 NDUFA1O15239 70 aa7.33□□□□□ -1.24
VPS13A-203ENST00000360280 WT1-ASQ06250 92 aa7.33□□□□□ -1.24
VPS13A-203ENST00000360280 NDUFC1O43677 76 aa7.33□□□□□ -1.24
VPS13A-203ENST00000360280 Q6ZQT7 251 aa7.33□□□□□ -1.24
VPS13A-203ENST00000360280 FAM110AQ9BQ89 295 aa7.33□□□□□ -1.24
VPS13A-203ENST00000360280 ATRXP46100 2492 aa7.33□□□□□ -1.24
VPS13A-203ENST00000360280 FAM120AOSQ5T036 256 aa7.33□□□□□ -1.24
VPS13A-203ENST00000360280 COL8A2P25067 703 aa7.33□□□□□ -1.24
VPS13A-203ENST00000360280 PRRC2AP48634 2157 aaKnown RBP7.33□□□□□ -1.24
VPS13A-203ENST00000360280 RUSC1-AS1Q66K80 236 aa7.33□□□□□ -1.24
VPS13A-203ENST00000360280 Q8N1Y9 231 aa7.32□□□□□ -1.24
VPS13A-203ENST00000360280 IGHV1-58A0A0C4DH39 117 aa7.32□□□□□ -1.24
VPS13A-203ENST00000360280 LECT2O14960 151 aa7.32□□□□□ -1.24
VPS13A-203ENST00000360280 RAI1Q7Z5J4 1906 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-203ENST00000360280 FGF23Q9GZV9 251 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-203ENST00000360280 TRAV23DV6A0A075B6W5 121 aa7.32□□□□□ -1.24
VPS13A-203ENST00000360280 C3orf22Q8N5N4 141 aa7.32□□□□□ -1.24
VPS13A-203ENST00000360280 MALRD1Q5VYJ5 2156 aa7.32□□□□□ -1.24
VPS13A-203ENST00000360280 DSCAMO60469 2012 aa7.32□□□□□ -1.24
VPS13A-203ENST00000360280 IGKV1-6A0A0C4DH72 117 aa7.32□□□□□ -1.24
VPS13A-203ENST00000360280 C5orf38Q86SI9 138 aa7.32□□□□□ -1.24
VPS13A-203ENST00000360280 TEX22C9J3V5 150 aa7.31□□□□□ -1.24
VPS13A-203ENST00000360280 CD59P13987 128 aa7.31□□□□□ -1.24
VPS13A-203ENST00000360280 PIFOQ8TCI5 191 aa7.31□□□□□ -1.24
VPS13A-203ENST00000360280 C11orf86A6NJI1 115 aa7.31□□□□□ -1.24
VPS13A-203ENST00000360280 TRBV7-3A0A075B6L6 115 aa7.31□□□□□ -1.24
VPS13A-203ENST00000360280 WI2-2373I1.2A0A1W2PRP0 233 aa7.31□□□□□ -1.24
VPS13A-203ENST00000360280 G3V318 75 aa7.31□□□□□ -1.24
VPS13A-203ENST00000360280 RPL39LQ96EH5 51 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms