RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 A0A087WX48 190 aa19.74■□□□□ 0.75
CUEDC1-201ENST00000360238 A6NDN8 102 aa19.74■□□□□ 0.75
CUEDC1-201ENST00000360238 MUC4Q99102 2169 aa19.74■□□□□ 0.75
CUEDC1-201ENST00000360238 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.74■□□□□ 0.75
CUEDC1-201ENST00000360238 LGALS1P09382 135 aaKnown RBP19.74■□□□□ 0.75
CUEDC1-201ENST00000360238 RPL39LQ96EH5 51 aaKnown RBP19.74■□□□□ 0.75
CUEDC1-201ENST00000360238 IGKV2D-26A0A0A0MRZ7 120 aa19.73■□□□□ 0.75
CUEDC1-201ENST00000360238 CBY3A6NI87 242 aa19.73■□□□□ 0.75
CUEDC1-201ENST00000360238 PRB1P04280 392 aa19.73■□□□□ 0.75
CUEDC1-201ENST00000360238 ELANEP08246 267 aa19.73■□□□□ 0.75
CUEDC1-201ENST00000360238 Q6YL49 198 aa19.73■□□□□ 0.75
CUEDC1-201ENST00000360238 MAPK1IP1LQ8NDC0 245 aa19.73■□□□□ 0.75
CUEDC1-201ENST00000360238 MRPL35Q9NZE8 188 aaKnown RBP19.73■□□□□ 0.75
CUEDC1-201ENST00000360238 TRAV12-1A0A0B4J245 112 aa19.73■□□□□ 0.75
CUEDC1-201ENST00000360238 RNF223E7ERA6 249 aa19.73■□□□□ 0.75
CUEDC1-201ENST00000360238 LGALS9O00182 355 aa19.73■□□□□ 0.75
CUEDC1-201ENST00000360238 SNRPD3P62318 126 aaKnown RBP19.73■□□□□ 0.75
CUEDC1-201ENST00000360238 ZC2HC1BQ5TFG8 222 aa19.73■□□□□ 0.75
CUEDC1-201ENST00000360238 TOMM6Q96B49 74 aa19.73■□□□□ 0.75
CUEDC1-201ENST00000360238 HIGD1BQ9P298 99 aa19.72■□□□□ 0.75
CUEDC1-201ENST00000360238 CR1P17927 2039 aa19.72■□□□□ 0.75
CUEDC1-201ENST00000360238 PLNP26678 52 aa19.71■□□□□ 0.75
CUEDC1-201ENST00000360238 KIF25-AS1Q9Y6Z4 181 aa19.71■□□□□ 0.75
CUEDC1-201ENST00000360238 K7EQG2 157 aa19.71■□□□□ 0.75
CUEDC1-201ENST00000360238 ZNF688P0C7X2 276 aa19.71■□□□□ 0.75
CUEDC1-201ENST00000360238 IGHV4-31P0DP07 118 aa19.71■□□□□ 0.75
CUEDC1-201ENST00000360238 ZNF702PQ9H963 129 aa19.71■□□□□ 0.75
CUEDC1-201ENST00000360238 ERASQ7Z444 233 aa19.7■□□□□ 0.74
CUEDC1-201ENST00000360238 OR4C5Q8NGB2 326 aa19.7■□□□□ 0.74
CUEDC1-201ENST00000360238 TMEM160Q9NX00 188 aa19.7■□□□□ 0.74
CUEDC1-201ENST00000360238 A0A0J9YX75 114 aa19.7■□□□□ 0.74
CUEDC1-201ENST00000360238 GTSCR1Q86UQ5 136 aa19.69■□□□□ 0.74
CUEDC1-201ENST00000360238 USP24Q9UPU5 2620 aa19.69■□□□□ 0.74
CUEDC1-201ENST00000360238 LINC00315P59091 139 aa19.68■□□□□ 0.74
CUEDC1-201ENST00000360238 UBE2E2Q96LR5 201 aa19.68■□□□□ 0.74
CUEDC1-201ENST00000360238 TRAV12-3A0A0B4J271 114 aa19.68■□□□□ 0.74
CUEDC1-201ENST00000360238 RPL32P62910 135 aaKnown RBP19.68■□□□□ 0.74
CUEDC1-201ENST00000360238 RNF152Q8N8N0 203 aa19.68■□□□□ 0.74
CUEDC1-201ENST00000360238 SCGB3A1Q96QR1 104 aa19.68■□□□□ 0.74
CUEDC1-201ENST00000360238 IGHV4OR15-8A0A075B7B6 117 aa19.67■□□□□ 0.74
CUEDC1-201ENST00000360238 A0A087WW49 117 aa19.67■□□□□ 0.74
CUEDC1-201ENST00000360238 H3BRM9 83 aa19.67■□□□□ 0.74
CUEDC1-201ENST00000360238 SYNJ2BPP57105 145 aa19.67■□□□□ 0.74
CUEDC1-201ENST00000360238 F8VRH5 84 aa19.67■□□□□ 0.74
CUEDC1-201ENST00000360238 H7C1H1 209 aa19.67■□□□□ 0.74
CUEDC1-201ENST00000360238 CD7P09564 240 aa19.67■□□□□ 0.74
CUEDC1-201ENST00000360238 BBC3Q96PG8 261 aaPredicted RBP19.67■□□□□ 0.74
CUEDC1-201ENST00000360238 FBN2P35556 2912 aa19.66■□□□□ 0.74
CUEDC1-201ENST00000360238 USP9YO00507 2555 aaPredicted RBP19.66■□□□□ 0.74
CUEDC1-201ENST00000360238 AMMECR1LQ6DCA0 310 aa19.66■□□□□ 0.74
CUEDC1-201ENST00000360238 BEX4Q9NWD9 120 aaPredicted RBP19.66■□□□□ 0.74
CUEDC1-201ENST00000360238 PRRC2AP48634 2157 aaKnown RBP19.65■□□□□ 0.74
CUEDC1-201ENST00000360238 TRAV8-6A0A0B4J262 113 aa19.64■□□□□ 0.74
CUEDC1-201ENST00000360238 HOXD3P31249 432 aaPredicted RBP19.64■□□□□ 0.74
CUEDC1-201ENST00000360238 C2orf66Q6UXQ4 117 aa19.64■□□□□ 0.74
CUEDC1-201ENST00000360238 WFDC12Q8WWY7 111 aa19.64■□□□□ 0.74
CUEDC1-201ENST00000360238 CSTL1Q9H114 145 aa19.64■□□□□ 0.74
CUEDC1-201ENST00000360238 K7EP13 123 aa19.64■□□□□ 0.73
CUEDC1-201ENST00000360238 NEXN-AS1Q8NBZ9 246 aa19.64■□□□□ 0.73
CUEDC1-201ENST00000360238 C9orf85Q96MD7 179 aa19.64■□□□□ 0.73
CUEDC1-201ENST00000360238 ZNF462Q96JM2 2506 aa19.64■□□□□ 0.73
CUEDC1-201ENST00000360238 UBR5O95071 2799 aaPredicted RBP19.63■□□□□ 0.73
CUEDC1-201ENST00000360238 FAM208BQ5VWN6 2430 aa19.63■□□□□ 0.73
CUEDC1-201ENST00000360238 HOXA3O43365 443 aaPredicted RBP19.63■□□□□ 0.73
CUEDC1-201ENST00000360238 ZNF843Q8N446 348 aa19.63■□□□□ 0.73
CUEDC1-201ENST00000360238 CHAC1Q9BUX1 264 aa19.63■□□□□ 0.73
CUEDC1-201ENST00000360238 TTTY13Q9BZ97 58 aa19.63■□□□□ 0.73
CUEDC1-201ENST00000360238 CSMD2Q7Z408 3487 aa19.62■□□□□ 0.73
CUEDC1-201ENST00000360238 IGHV3-16A0A0C4DH30 117 aa19.62■□□□□ 0.73
CUEDC1-201ENST00000360238 C9orf118A6NHY6 69 aa19.62■□□□□ 0.73
CUEDC1-201ENST00000360238 DUSP14O95147 198 aaKnown RBP19.62■□□□□ 0.73
CUEDC1-201ENST00000360238 CDKN1BP46527 198 aa19.62■□□□□ 0.73
CUEDC1-201ENST00000360238 LRRC75A-AS1Q8N1F1 130 aa19.62■□□□□ 0.73
CUEDC1-201ENST00000360238 CHTOPQ9Y3Y2 248 aaKnown RBP19.62■□□□□ 0.73
CUEDC1-201ENST00000360238 TRBV25-1A0A075B6N4 114 aa19.61■□□□□ 0.73
CUEDC1-201ENST00000360238 SUMO4Q6EEV6 95 aa19.61■□□□□ 0.73
CUEDC1-201ENST00000360238 LINC01549A6NIU2 74 aa19.61■□□□□ 0.73
CUEDC1-201ENST00000360238 DEFB113Q30KQ7 82 aa19.61■□□□□ 0.73
CUEDC1-201ENST00000360238 Q5PR19 223 aa19.6■□□□□ 0.73
CUEDC1-201ENST00000360238 FOXI2Q6ZQN5 318 aa19.6■□□□□ 0.73
CUEDC1-201ENST00000360238 BAALCQ8WXS3 180 aa19.6■□□□□ 0.73
CUEDC1-201ENST00000360238 LRRK2Q5S007 2527 aa19.59■□□□□ 0.73
CUEDC1-201ENST00000360238 ZANQ9Y493 2812 aa19.59■□□□□ 0.73
CUEDC1-201ENST00000360238 KRTAP10-9P60411 292 aa19.59■□□□□ 0.73
CUEDC1-201ENST00000360238 SYT8Q8NBV8 401 aa19.59■□□□□ 0.73
CUEDC1-201ENST00000360238 JPT2Q9H910 190 aa19.59■□□□□ 0.73
CUEDC1-201ENST00000360238 TRAV12-2A0A075B6T6 113 aa19.59■□□□□ 0.73
CUEDC1-201ENST00000360238 POLR2KP53803 58 aaKnown RBP19.59■□□□□ 0.73
CUEDC1-201ENST00000360238 POLQO75417 2590 aa19.58■□□□□ 0.73
CUEDC1-201ENST00000360238 IGHV1OR15-1A0A075B7D0 117 aa19.58■□□□□ 0.72
CUEDC1-201ENST00000360238 IGKV3-20P01619 116 aa19.58■□□□□ 0.72
CUEDC1-201ENST00000360238 Q8N2B8 174 aa19.58■□□□□ 0.72
CUEDC1-201ENST00000360238 ZFYVE26Q68DK2 2539 aa19.57■□□□□ 0.72
CUEDC1-201ENST00000360238 A0A087WWL8 130 aa19.57■□□□□ 0.72
CUEDC1-201ENST00000360238 SPINK13Q1W4C9 94 aa19.57■□□□□ 0.72
CUEDC1-201ENST00000360238 DUX5Q96PT3 197 aa19.57■□□□□ 0.72
CUEDC1-201ENST00000360238 CYSLTR1Q9Y271 337 aa19.57■□□□□ 0.72
CUEDC1-201ENST00000360238 DOPEY2Q9Y3R5 2298 aa19.56■□□□□ 0.72
CUEDC1-201ENST00000360238 Q8N1Y9 231 aa19.56■□□□□ 0.72
CUEDC1-201ENST00000360238 TRBV6-5A0A0K0K1A5 114 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms