RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 SCGB2A2Q13296 93 aa15.71■□□□□ 0.11
TRIM3-202ENST00000359518 TRAV21A0A0B4J279 112 aa15.7■□□□□ 0.1
TRIM3-202ENST00000359518 ETDBQ3ZM63 59 aa15.7■□□□□ 0.1
TRIM3-202ENST00000359518 FOXI2Q6ZQN5 318 aa15.7■□□□□ 0.1
TRIM3-202ENST00000359518 DPH3P1Q9H4G8 78 aa15.7■□□□□ 0.1
TRIM3-202ENST00000359518 ORMDL2Q53FV1 153 aa15.7■□□□□ 0.1
TRIM3-202ENST00000359518 JPT2Q9H910 190 aa15.7■□□□□ 0.1
TRIM3-202ENST00000359518 HLA-DRB4P13762 266 aa15.69■□□□□ 0.1
TRIM3-202ENST00000359518 EDN2P20800 178 aa15.69■□□□□ 0.1
TRIM3-202ENST00000359518 GTSF1LQ9H1H1 148 aa15.69■□□□□ 0.1
TRIM3-202ENST00000359518 MOB4Q9Y3A3 225 aa15.69■□□□□ 0.1
TRIM3-202ENST00000359518 HLA-DRB4X5D2U9 266 aa15.69■□□□□ 0.1
TRIM3-202ENST00000359518 MYMXA0A1B0GTQ4 84 aa15.69■□□□□ 0.1
TRIM3-202ENST00000359518 PRSS29PA6NIE9 313 aa15.69■□□□□ 0.1
TRIM3-202ENST00000359518 PF4V1P10720 104 aa15.68■□□□□ 0.1
TRIM3-202ENST00000359518 LY6DQ14210 128 aa15.68■□□□□ 0.1
TRIM3-202ENST00000359518 NEXN-AS1Q8NBZ9 246 aa15.68■□□□□ 0.1
TRIM3-202ENST00000359518 KLHL30-AS1Q8NEE0 82 aa15.68■□□□□ 0.1
TRIM3-202ENST00000359518 BAALCQ8WXS3 180 aa15.68■□□□□ 0.1
TRIM3-202ENST00000359518 TOMM6Q96B49 74 aa15.68■□□□□ 0.1
TRIM3-202ENST00000359518 LINC00477Q96M19 166 aa15.68■□□□□ 0.1
TRIM3-202ENST00000359518 PRADC1Q9BSG0 188 aa15.68■□□□□ 0.1
TRIM3-202ENST00000359518 CD300EQ496F6 205 aaPredicted RBP15.68■□□□□ 0.1
TRIM3-202ENST00000359518 Q6ZS46 218 aa15.68■□□□□ 0.1
TRIM3-202ENST00000359518 KLK9Q2XQG4 91 aa15.67■□□□□ 0.1
TRIM3-202ENST00000359518 KLK9Q9UKQ9 250 aa15.67■□□□□ 0.1
TRIM3-202ENST00000359518 USP9YO00507 2555 aaPredicted RBP15.67■□□□□ 0.1
TRIM3-202ENST00000359518 TRBV7-3A0A075B6L6 115 aa15.67■□□□□ 0.1
TRIM3-202ENST00000359518 DUSP14O95147 198 aaKnown RBP15.67■□□□□ 0.1
TRIM3-202ENST00000359518 SCGB1D4Q6XE38 83 aa15.67■□□□□ 0.1
TRIM3-202ENST00000359518 LGALS1P09382 135 aaKnown RBP15.66■□□□□ 0.1
TRIM3-202ENST00000359518 BLCAPP62952 87 aa15.66■□□□□ 0.1
TRIM3-202ENST00000359518 A0A087WWL8 130 aa15.65■□□□□ 0.1
TRIM3-202ENST00000359518 TRAV12-1A0A0B4J245 112 aa15.65■□□□□ 0.1
TRIM3-202ENST00000359518 ZNF815PA8K554 130 aa15.65■□□□□ 0.1
TRIM3-202ENST00000359518 RNF223E7ERA6 249 aa15.65■□□□□ 0.1
TRIM3-202ENST00000359518 RNASE3P12724 160 aaKnown RBP15.65■□□□□ 0.1
TRIM3-202ENST00000359518 SLC25A16P16260 332 aa15.65■□□□□ 0.1
TRIM3-202ENST00000359518 PLEKHB2Q96CS7 222 aa15.65■□□□□ 0.1
TRIM3-202ENST00000359518 ITPR1Q14643 2758 aa15.65■□□□□ 0.1
TRIM3-202ENST00000359518 TSSC4Q9Y5U2 329 aaPredicted RBP15.65■□□□□ 0.1
TRIM3-202ENST00000359518 FAM223BA6NKX1 122 aa15.65■□□□□ 0.1
TRIM3-202ENST00000359518 C19orf84I3L1E1 186 aa15.65■□□□□ 0.1
TRIM3-202ENST00000359518 FAM223AQ8IWN6 122 aa15.65■□□□□ 0.1
TRIM3-202ENST00000359518 OVOL1O14753 267 aa15.64■□□□□ 0.09
TRIM3-202ENST00000359518 IGHV4-38-2P0DP08 117 aa15.64■□□□□ 0.09
TRIM3-202ENST00000359518 RRN3P1Q2M238 152 aa15.64■□□□□ 0.09
TRIM3-202ENST00000359518 RHPN1-AS1Q9BWJ2 59 aa15.64■□□□□ 0.09
TRIM3-202ENST00000359518 F5H697 171 aa15.64■□□□□ 0.09
TRIM3-202ENST00000359518 SOCS3O14543 225 aa15.64■□□□□ 0.09
TRIM3-202ENST00000359518 SMAGPQ0VAQ4 97 aa15.64■□□□□ 0.09
TRIM3-202ENST00000359518 SPANXB1Q9NS25 103 aaPredicted RBP15.64■□□□□ 0.09
TRIM3-202ENST00000359518 INSL3P51460 131 aa15.63■□□□□ 0.09
TRIM3-202ENST00000359518 SRSF9Q13242 221 aaKnown RBP eCLIP15.63■□□□□ 0.09
TRIM3-202ENST00000359518 TAL2Q16559 108 aa15.63■□□□□ 0.09
TRIM3-202ENST00000359518 C20orf78Q9BR46 151 aa15.63■□□□□ 0.09
TRIM3-202ENST00000359518 RPL39P62891 51 aaKnown RBP15.63■□□□□ 0.09
TRIM3-202ENST00000359518 PGPEP1Q9NXJ5 209 aa15.63■□□□□ 0.09
TRIM3-202ENST00000359518 LENEPQ9Y5L5 61 aa15.63■□□□□ 0.09
TRIM3-202ENST00000359518 IGKV3-20P01619 116 aa15.62■□□□□ 0.09
TRIM3-202ENST00000359518 H3BUX3 64 aa15.62■□□□□ 0.09
TRIM3-202ENST00000359518 NDUFA4O00483 81 aa15.62■□□□□ 0.09
TRIM3-202ENST00000359518 CENPEQ02224 2701 aa15.62■□□□□ 0.09
TRIM3-202ENST00000359518 GAGE13Q4V321 117 aa15.62■□□□□ 0.09
TRIM3-202ENST00000359518 IGHV1-69DA0A0B4J2H0 117 aa15.61■□□□□ 0.09
TRIM3-202ENST00000359518 HOXA3O43365 443 aaPredicted RBP15.61■□□□□ 0.09
TRIM3-202ENST00000359518 IGHV1-69P01742 117 aa15.61■□□□□ 0.09
TRIM3-202ENST00000359518 IGHV4-39P01824 125 aa15.61■□□□□ 0.09
TRIM3-202ENST00000359518 C19orf54Q5BKX5 351 aa15.61■□□□□ 0.09
TRIM3-202ENST00000359518 FAM74A4Q5TZK3 123 aa15.61■□□□□ 0.09
TRIM3-202ENST00000359518 MRPL16Q9NX20 251 aaKnown RBP15.61■□□□□ 0.09
TRIM3-202ENST00000359518 F8W1H4 67 aa15.61■□□□□ 0.09
TRIM3-202ENST00000359518 AZU1P20160 251 aa15.61■□□□□ 0.09
TRIM3-202ENST00000359518 TP53TG1Q9Y2A0 90 aa15.61■□□□□ 0.09
TRIM3-202ENST00000359518 MORN3Q6PF18 240 aaPredicted RBP15.6■□□□□ 0.09
TRIM3-202ENST00000359518 APOMO95445 188 aa15.6■□□□□ 0.09
TRIM3-202ENST00000359518 SAMD13Q5VXD3 122 aa15.6■□□□□ 0.09
TRIM3-202ENST00000359518 SPAG8Q99932 426 aaPredicted RBP15.6■□□□□ 0.09
TRIM3-202ENST00000359518 CSMD2Q7Z408 3487 aa15.6■□□□□ 0.09
TRIM3-202ENST00000359518 FLNCQ14315 2725 aa15.6■□□□□ 0.09
TRIM3-202ENST00000359518 TRAV12-3A0A0B4J271 114 aa15.6■□□□□ 0.09
TRIM3-202ENST00000359518 IGHV4-61A0A0C4DH41 118 aa15.6■□□□□ 0.09
TRIM3-202ENST00000359518 LINC01549A6NIU2 74 aa15.6■□□□□ 0.09
TRIM3-202ENST00000359518 C11orf86A6NJI1 115 aa15.6■□□□□ 0.09
TRIM3-202ENST00000359518 LOC107984156A0A0G2JMH3 177 aa15.59■□□□□ 0.09
TRIM3-202ENST00000359518 ARL17AQ8IVW1 177 aa15.59■□□□□ 0.09
TRIM3-202ENST00000359518 CRYGDP07320 174 aa15.59■□□□□ 0.09
TRIM3-202ENST00000359518 TMEM95Q3KNT9 176 aa15.59■□□□□ 0.09
TRIM3-202ENST00000359518 A0A1B0GWB2 263 aa15.58■□□□□ 0.09
TRIM3-202ENST00000359518 TSHBP01222 138 aa15.58■□□□□ 0.09
TRIM3-202ENST00000359518 UTP20O75691 2785 aaKnown RBP15.58■□□□□ 0.08
TRIM3-202ENST00000359518 ZANQ9Y493 2812 aa15.58■□□□□ 0.08
TRIM3-202ENST00000359518 POLQO75417 2590 aa15.58■□□□□ 0.08
TRIM3-202ENST00000359518 CD7P09564 240 aa15.58■□□□□ 0.08
TRIM3-202ENST00000359518 FAM159AQ6UWV7 190 aa15.57■□□□□ 0.08
TRIM3-202ENST00000359518 CUBNO60494 3623 aa15.57■□□□□ 0.08
TRIM3-202ENST00000359518 ZNF256Q9Y2P7 627 aaPredicted RBP15.57■□□□□ 0.08
TRIM3-202ENST00000359518 GAGE12HA6NDE8 117 aa15.57■□□□□ 0.08
TRIM3-202ENST00000359518 TRAV12-2A0A075B6T6 113 aa15.56■□□□□ 0.08
TRIM3-202ENST00000359518 SUMO4Q6EEV6 95 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms