RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 MRPL23Q16540 153 aaKnown RBP11.76□□□□□ -0.53
FAM3D-201ENST00000358781 ZNF506Q5JVG8 444 aa11.76□□□□□ -0.53
FAM3D-201ENST00000358781 LINC00336Q6ZUF6 198 aa11.76□□□□□ -0.53
FAM3D-201ENST00000358781 NHLRC2Q8NBF2 726 aa11.76□□□□□ -0.53
FAM3D-201ENST00000358781 UPK3BQ9BT76 320 aa11.76□□□□□ -0.53
FAM3D-201ENST00000358781 NBDYA0A0U1RRE5 68 aa11.75□□□□□ -0.53
FAM3D-201ENST00000358781 RTL8CO15255 209 aa11.75□□□□□ -0.53
FAM3D-201ENST00000358781 DNLZQ5SXM8 178 aa11.75□□□□□ -0.53
FAM3D-201ENST00000358781 CFAP126Q5VTH2 177 aa11.75□□□□□ -0.53
FAM3D-201ENST00000358781 BAGE2Q86Y30 109 aa11.75□□□□□ -0.53
FAM3D-201ENST00000358781 C11orf52Q96A22 123 aa11.75□□□□□ -0.53
FAM3D-201ENST00000358781 TXNDC17Q9BRA2 123 aa11.75□□□□□ -0.53
FAM3D-201ENST00000358781 Q9H8V8 135 aa11.75□□□□□ -0.53
FAM3D-201ENST00000358781 IL36BQ9NZH7 164 aa11.75□□□□□ -0.53
FAM3D-201ENST00000358781 K7EQD1 137 aa11.74□□□□□ -0.53
FAM3D-201ENST00000358781 CIDEAO60543 219 aa11.74□□□□□ -0.53
FAM3D-201ENST00000358781 GYPEP15421 78 aa11.74□□□□□ -0.53
FAM3D-201ENST00000358781 GATA1P15976 413 aaPredicted RBP11.74□□□□□ -0.53
FAM3D-201ENST00000358781 RPL35P42766 123 aaKnown RBP11.74□□□□□ -0.53
FAM3D-201ENST00000358781 LINC01559Q495D7 138 aa11.74□□□□□ -0.53
FAM3D-201ENST00000358781 MLST8Q9BVC4 326 aa11.74□□□□□ -0.53
FAM3D-201ENST00000358781 GRIFINA4D1Z8 144 aa11.73□□□□□ -0.53
FAM3D-201ENST00000358781 H3BVH4 76 aa11.73□□□□□ -0.53
FAM3D-201ENST00000358781 IFNA1P01562 189 aa11.73□□□□□ -0.53
FAM3D-201ENST00000358781 PIK3CD-AS1Q5SR53 167 aa11.73□□□□□ -0.53
FAM3D-201ENST00000358781 NEGR1Q7Z3B1 354 aa11.73□□□□□ -0.53
FAM3D-201ENST00000358781 ZNF575Q86XF7 245 aa11.73□□□□□ -0.53
FAM3D-201ENST00000358781 PCNPQ8WW12 178 aaKnown RBP11.73□□□□□ -0.53
FAM3D-201ENST00000358781 ARMS2P0C7Q2 107 aa11.72□□□□□ -0.53
FAM3D-201ENST00000358781 SRIP30626 198 aa11.72□□□□□ -0.53
FAM3D-201ENST00000358781 NKX2-5P52952 324 aaPredicted RBP11.72□□□□□ -0.53
FAM3D-201ENST00000358781 MEF2BQ02080 365 aaPredicted RBP11.72□□□□□ -0.53
FAM3D-201ENST00000358781 SOHLH1Q5JUK2 328 aa11.72□□□□□ -0.53
FAM3D-201ENST00000358781 C1orf134Q5TEV5 83 aa11.72□□□□□ -0.53
FAM3D-201ENST00000358781 DERL1Q9BUN8 251 aa11.72□□□□□ -0.53
FAM3D-201ENST00000358781 PKHD1P08F94 4074 aa11.72□□□□□ -0.53
FAM3D-201ENST00000358781 TMSB15BA0A087X1C1 80 aa11.71□□□□□ -0.53
FAM3D-201ENST00000358781 BCL2P10415 239 aa11.71□□□□□ -0.53
FAM3D-201ENST00000358781 LYPD5Q6UWN5 251 aa11.71□□□□□ -0.53
FAM3D-201ENST00000358781 ALKAL2Q6UX46 152 aa11.71□□□□□ -0.53
FAM3D-201ENST00000358781 IGHV3-73A0A0B4J1V6 119 aa11.7□□□□□ -0.54
FAM3D-201ENST00000358781 LOC100131303A0A0U1RQF7 123 aa11.7□□□□□ -0.54
FAM3D-201ENST00000358781 A8MWV9 139 aa11.7□□□□□ -0.54
FAM3D-201ENST00000358781 PDE6DO43924 150 aa11.7□□□□□ -0.54
FAM3D-201ENST00000358781 TTC32Q5I0X7 151 aa11.7□□□□□ -0.54
FAM3D-201ENST00000358781 SLC25A29Q8N8R3 303 aa11.7□□□□□ -0.54
FAM3D-201ENST00000358781 SCRT2Q9NQ03 307 aa11.7□□□□□ -0.54
FAM3D-201ENST00000358781 PKD1P98161 4303 aa11.7□□□□□ -0.54
FAM3D-201ENST00000358781 TRBV6-4A0A1B0GX49 114 aa11.69□□□□□ -0.54
FAM3D-201ENST00000358781 PRSS29PA6NIE9 313 aa11.69□□□□□ -0.54
FAM3D-201ENST00000358781 NXPH4O95158 308 aa11.69□□□□□ -0.54
FAM3D-201ENST00000358781 TAGLN2P37802 199 aaKnown RBP11.69□□□□□ -0.54
FAM3D-201ENST00000358781 DMRTA1Q5VZB9 504 aa11.69□□□□□ -0.54
FAM3D-201ENST00000358781 SYT8Q8NBV8 401 aa11.69□□□□□ -0.54
FAM3D-201ENST00000358781 PARLQ9H300 379 aa11.69□□□□□ -0.54
FAM3D-201ENST00000358781 VAX2Q9UIW0 290 aa11.69□□□□□ -0.54
FAM3D-201ENST00000358781 BLOC1S1P78537 153 aa11.68□□□□□ -0.54
FAM3D-201ENST00000358781 RPL19P84098 196 aaKnown RBP11.68□□□□□ -0.54
FAM3D-201ENST00000358781 RHOHQ15669 191 aa11.68□□□□□ -0.54
FAM3D-201ENST00000358781 CENPWQ5EE01 88 aa11.68□□□□□ -0.54
FAM3D-201ENST00000358781 PRR27Q6MZM9 219 aa11.68□□□□□ -0.54
FAM3D-201ENST00000358781 ZFP2Q6ZN57 461 aa11.68□□□□□ -0.54
FAM3D-201ENST00000358781 SH2D6Q7Z4S9 175 aa11.68□□□□□ -0.54
FAM3D-201ENST00000358781 C6orf223Q8N319 242 aa11.68□□□□□ -0.54
FAM3D-201ENST00000358781 PRADC1Q9BSG0 188 aa11.68□□□□□ -0.54
FAM3D-201ENST00000358781 KRTAP1-5Q9BYS1 174 aa11.68□□□□□ -0.54
FAM3D-201ENST00000358781 JPT2Q9H910 190 aa11.68□□□□□ -0.54
FAM3D-201ENST00000358781 BOLA1Q9Y3E2 137 aa11.68□□□□□ -0.54
FAM3D-201ENST00000358781 PHLDA3Q9Y5J5 127 aa11.68□□□□□ -0.54
FAM3D-201ENST00000358781 A0A1W2PPQ1 181 aa11.67□□□□□ -0.54
FAM3D-201ENST00000358781 SIVA1O15304 175 aa11.67□□□□□ -0.54
FAM3D-201ENST00000358781 CXCL1P09341 107 aa11.67□□□□□ -0.54
FAM3D-201ENST00000358781 MGST1P10620 155 aaKnown RBP11.67□□□□□ -0.54
FAM3D-201ENST00000358781 MED9Q9NWA0 146 aa11.67□□□□□ -0.54
FAM3D-201ENST00000358781 A0A1B0GVY2 172 aa11.66□□□□□ -0.54
FAM3D-201ENST00000358781 RAB19A4D1S5 217 aa11.66□□□□□ -0.54
FAM3D-201ENST00000358781 IGLV2-8P01709 118 aa11.66□□□□□ -0.54
FAM3D-201ENST00000358781 MED14OSP0DP75 135 aa11.66□□□□□ -0.54
FAM3D-201ENST00000358781 UFSP1Q6NVU6 142 aa11.66□□□□□ -0.54
FAM3D-201ENST00000358781 Q6ZSN1 163 aa11.66□□□□□ -0.54
FAM3D-201ENST00000358781 SAMD10Q9BYL1 202 aa11.66□□□□□ -0.54
FAM3D-201ENST00000358781 M0R381 172 aa11.65□□□□□ -0.54
FAM3D-201ENST00000358781 GNG4P50150 75 aa11.65□□□□□ -0.54
FAM3D-201ENST00000358781 ZFP82Q8N141 532 aa11.65□□□□□ -0.54
FAM3D-201ENST00000358781 LYPD6BQ8NI32 183 aa11.65□□□□□ -0.54
FAM3D-201ENST00000358781 SMIM12Q96EX1 92 aa11.65□□□□□ -0.54
FAM3D-201ENST00000358781 RHODO00212 210 aa11.64□□□□□ -0.55
FAM3D-201ENST00000358781 TIRAPP58753 221 aa11.64□□□□□ -0.55
FAM3D-201ENST00000358781 SFRP2Q96HF1 295 aa11.64□□□□□ -0.55
FAM3D-201ENST00000358781 DNAH11Q96DT5 4516 aa11.64□□□□□ -0.55
FAM3D-201ENST00000358781 TRBV20OR9-2A0A075B6H5 130 aa11.63□□□□□ -0.55
FAM3D-201ENST00000358781 DYNC1H1Q14204 4646 aaKnown RBP11.63□□□□□ -0.55
FAM3D-201ENST00000358781 SNAI2O43623 268 aa11.62□□□□□ -0.55
FAM3D-201ENST00000358781 BTF3P20290 206 aaKnown RBP11.62□□□□□ -0.55
FAM3D-201ENST00000358781 OR10AG1Q8NH19 301 aa11.62□□□□□ -0.55
FAM3D-201ENST00000358781 SSBP4Q9BWG4 385 aaPredicted RBP11.62□□□□□ -0.55
FAM3D-201ENST00000358781 A0A087WWL8 130 aa11.61□□□□□ -0.55
FAM3D-201ENST00000358781 C19orf71A6NCJ1 209 aa11.61□□□□□ -0.55
FAM3D-201ENST00000358781 RBFOX3A6NFN3 312 aa11.61□□□□□ -0.55
FAM3D-201ENST00000358781 CRYGDP07320 174 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms