RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SPAG8Q99932 426 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-203ENST00000358528 TLN2Q9Y4G6 2542 aa5.04□□□□□ -1.6
CSDE1-203ENST00000358528 F8W735 103 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-203ENST00000358528 DUSP14O95147 198 aaKnown RBP5.04□□□□□ -1.6
CSDE1-203ENST00000358528 IGHV4-39P01824 125 aa5.04□□□□□ -1.6
CSDE1-203ENST00000358528 MINOS1Q5TGZ0 78 aa5.04□□□□□ -1.6
CSDE1-203ENST00000358528 JPT2Q9H910 190 aa5.04□□□□□ -1.6
CSDE1-203ENST00000358528 MINOS1-NBL1R4GNA1 71 aa5.04□□□□□ -1.6
CSDE1-203ENST00000358528 OVOL3O00110 214 aa5.04□□□□□ -1.6
CSDE1-203ENST00000358528 TRBV12-3P01733 135 aa5.04□□□□□ -1.6
CSDE1-203ENST00000358528 RPL39P62891 51 aaKnown RBP5.04□□□□□ -1.6
CSDE1-203ENST00000358528 C20orf78Q9BR46 151 aa5.04□□□□□ -1.6
CSDE1-203ENST00000358528 MSRB2Q9Y3D2 182 aa5.04□□□□□ -1.6
CSDE1-203ENST00000358528 TRAV12-2A0A075B6T6 113 aa5.04□□□□□ -1.6
CSDE1-203ENST00000358528 NPFFO15130 113 aa5.04□□□□□ -1.6
CSDE1-203ENST00000358528 SPINK8P0C7L1 97 aa5.04□□□□□ -1.6
CSDE1-203ENST00000358528 C1orf122Q6ZSJ8 110 aa5.04□□□□□ -1.6
CSDE1-203ENST00000358528 C9orf139Q6ZV77 190 aa5.04□□□□□ -1.6
CSDE1-203ENST00000358528 HIGD1BQ9P298 99 aa5.04□□□□□ -1.6
CSDE1-203ENST00000358528 CDSNQ15517 529 aa5.03□□□□□ -1.6
CSDE1-203ENST00000358528 CCDC140Q96MF4 163 aa5.03□□□□□ -1.6
CSDE1-203ENST00000358528 TRBV7-1A0A0A6YYK4 115 aa5.03□□□□□ -1.6
CSDE1-203ENST00000358528 TRAV8-2A0A0B4J237 113 aa5.03□□□□□ -1.6
CSDE1-203ENST00000358528 ADARB2-AS1A8MUL3 147 aa5.03□□□□□ -1.6
CSDE1-203ENST00000358528 PRR9Q5T870 116 aa5.03□□□□□ -1.6
CSDE1-203ENST00000358528 UNQ9165/PRO28630Q6UXU0 137 aa5.03□□□□□ -1.6
CSDE1-203ENST00000358528 PLEKHB2Q96CS7 222 aa5.03□□□□□ -1.6
CSDE1-203ENST00000358528 DUX5Q96PT3 197 aa5.03□□□□□ -1.6
CSDE1-203ENST00000358528 RHPN1-AS1Q9BWJ2 59 aa5.03□□□□□ -1.6
CSDE1-203ENST00000358528 A0A0U1RRA0 63 aa5.03□□□□□ -1.6
CSDE1-203ENST00000358528 IGHG4P01861 327 aa5.03□□□□□ -1.6
CSDE1-203ENST00000358528 LY6DQ14210 128 aa5.03□□□□□ -1.6
CSDE1-203ENST00000358528 ZFP2Q6ZN57 461 aa5.03□□□□□ -1.6
CSDE1-203ENST00000358528 MRAP2Q96G30 205 aa5.03□□□□□ -1.6
CSDE1-203ENST00000358528 H3BUX3 64 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 KLK9Q9UKQ9 250 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 ZNF292O60281 2723 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 A8MWV9 139 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 OOSP1A8MZH6 123 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 C9JAW5 83 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 E9PLD3 99 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 OVOL1O14753 267 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 LGALS1P09382 135 aaKnown RBP5.02□□□□□ -1.61
CSDE1-203ENST00000358528 ID1P41134 155 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 BAALCQ8WXS3 180 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 SPANXB1Q9NS25 103 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-203ENST00000358528 USP9XQ93008 2570 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-203ENST00000358528 CSMD1Q96PZ7 3565 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 SDHAF1A6NFY7 115 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 UBE2E1P51965 193 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 RNASE13Q5GAN3 156 aaKnown RBP5.02□□□□□ -1.61
CSDE1-203ENST00000358528 NRACQ8N912 160 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 GATD1Q8NB37 220 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 LY6G5BQ8NDX9 201 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 TMEM190Q8WZ59 177 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 C20orf173Q96LM9 149 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 OPRPNQ99935 248 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-203ENST00000358528 ZFAND3Q9H8U3 227 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 ATP6V0BQ99437 205 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 TM2D2Q9BX73 214 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 MOB4Q9Y3A3 225 aa5.02□□□□□ -1.61
CSDE1-203ENST00000358528 C11orf86A6NJI1 115 aa5.01□□□□□ -1.61
CSDE1-203ENST00000358528 ODF3BA8MYP8 253 aa5.01□□□□□ -1.61
CSDE1-203ENST00000358528 RASL10AQ92737 203 aa5.01□□□□□ -1.61
CSDE1-203ENST00000358528 SPXQ9BT56 116 aa5.01□□□□□ -1.61
CSDE1-203ENST00000358528 COL27A1Q8IZC6 1860 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-203ENST00000358528 IGHV7-4-1A0A0J9YVY3 117 aa5.01□□□□□ -1.61
CSDE1-203ENST00000358528 CENPVL3A0A0U1RRI6 287 aa5.01□□□□□ -1.61
CSDE1-203ENST00000358528 KNCNA6PVL3 124 aa5.01□□□□□ -1.61
CSDE1-203ENST00000358528 TAL2Q16559 108 aa5.01□□□□□ -1.61
CSDE1-203ENST00000358528 GEMIN7Q9H840 131 aaKnown RBP5.01□□□□□ -1.61
CSDE1-203ENST00000358528 IGHV3OR16-12A0A075B7B8 117 aa5.01□□□□□ -1.61
CSDE1-203ENST00000358528 RBAKDNA6NC62 111 aa5.01□□□□□ -1.61
CSDE1-203ENST00000358528 SPINK13Q1W4C9 94 aa5.01□□□□□ -1.61
CSDE1-203ENST00000358528 TMEM95Q3KNT9 176 aa5.01□□□□□ -1.61
CSDE1-203ENST00000358528 ZNF876PQ49A33 203 aa5.01□□□□□ -1.61
CSDE1-203ENST00000358528 DGAT2L7PQ6IED9 249 aa5.01□□□□□ -1.61
CSDE1-203ENST00000358528 VCX2Q9H322 139 aa5.01□□□□□ -1.61
CSDE1-203ENST00000358528 ASH1LQ9NR48 2969 aaKnown RBP5.01□□□□□ -1.61
CSDE1-203ENST00000358528 PPP1R17O96001 155 aa5□□□□□ -1.61
CSDE1-203ENST00000358528 KLRB1Q12918 225 aa5□□□□□ -1.61
CSDE1-203ENST00000358528 SONP18583 2426 aaKnown RBP5□□□□□ -1.61
CSDE1-203ENST00000358528 POLQO75417 2590 aa5□□□□□ -1.61
CSDE1-203ENST00000358528 K7ENP7 123 aa5□□□□□ -1.61
CSDE1-203ENST00000358528 VCYO14598 125 aa5□□□□□ -1.61
CSDE1-203ENST00000358528 BLCAPP62952 87 aa5□□□□□ -1.61
CSDE1-203ENST00000358528 PMVKQ15126 192 aa5□□□□□ -1.61
CSDE1-203ENST00000358528 ZNF48Q96MX3 618 aaPredicted RBP5□□□□□ -1.61
CSDE1-203ENST00000358528 C9orf47Q6ZRZ4 202 aa5□□□□□ -1.61
CSDE1-203ENST00000358528 ERG28Q9UKR5 140 aa5□□□□□ -1.61
CSDE1-203ENST00000358528 CLPSL1A2RUU4 121 aa4.99□□□□□ -1.61
CSDE1-203ENST00000358528 ATP5J2P56134 94 aa4.99□□□□□ -1.61
CSDE1-203ENST00000358528 ADORA2A-AS1P86434 159 aa4.99□□□□□ -1.61
CSDE1-203ENST00000358528 ANAPC13Q9BS18 74 aa4.99□□□□□ -1.61
CSDE1-203ENST00000358528 FOXI1Q12951 378 aa4.99□□□□□ -1.61
CSDE1-203ENST00000358528 PAPPA-AS1Q5QFB9 102 aa4.99□□□□□ -1.61
CSDE1-203ENST00000358528 TOMM6Q96B49 74 aa4.99□□□□□ -1.61
CSDE1-203ENST00000358528 J3QQQ9 107 aa4.99□□□□□ -1.61
CSDE1-203ENST00000358528 TSPAN13O95857 204 aa4.99□□□□□ -1.61
CSDE1-203ENST00000358528 CD28P10747 220 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms