RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 LINC00526Q96FQ7 95 aa7.22□□□□□ -1.25
SMARCAL1-202ENST00000358207 ITPR2Q14571 2701 aa7.21□□□□□ -1.25
SMARCAL1-202ENST00000358207 PRB4P10163 310 aaPredicted RBP7.21□□□□□ -1.25
SMARCAL1-202ENST00000358207 NDUFA11Q86Y39 141 aa7.21□□□□□ -1.25
SMARCAL1-202ENST00000358207 FLYWCH2Q96CP2 140 aaKnown RBP7.21□□□□□ -1.25
SMARCAL1-202ENST00000358207 DUX3Q96PT4 197 aa7.21□□□□□ -1.25
SMARCAL1-202ENST00000358207 ACANP16112 2415 aa7.21□□□□□ -1.25
SMARCAL1-202ENST00000358207 TRBV7-7A0A0K0K1E9 115 aa7.21□□□□□ -1.26
SMARCAL1-202ENST00000358207 MRPS12O15235 138 aaKnown RBP7.21□□□□□ -1.26
SMARCAL1-202ENST00000358207 TWIST1Q15672 202 aa7.21□□□□□ -1.26
SMARCAL1-202ENST00000358207 ZNF56Q15929 161 aa7.21□□□□□ -1.26
SMARCAL1-202ENST00000358207 IFI27L2Q9H2X8 130 aa7.21□□□□□ -1.26
SMARCAL1-202ENST00000358207 CUBNO60494 3623 aa7.21□□□□□ -1.26
SMARCAL1-202ENST00000358207 EBI3Q14213 229 aa7.21□□□□□ -1.26
SMARCAL1-202ENST00000358207 CCL13Q99616 98 aa7.21□□□□□ -1.26
SMARCAL1-202ENST00000358207 DYNLRB1Q9NP97 96 aa7.21□□□□□ -1.26
SMARCAL1-202ENST00000358207 CTSZQ9UBR2 303 aa7.21□□□□□ -1.26
SMARCAL1-202ENST00000358207 PRNDQ9UKY0 176 aa7.21□□□□□ -1.26
SMARCAL1-202ENST00000358207 UQCRQO14949 82 aa7.2□□□□□ -1.26
SMARCAL1-202ENST00000358207 NDUFA3O95167 84 aa7.2□□□□□ -1.26
SMARCAL1-202ENST00000358207 IGHV1-46P01743 117 aa7.2□□□□□ -1.26
SMARCAL1-202ENST00000358207 DEFB113Q30KQ7 82 aa7.2□□□□□ -1.26
SMARCAL1-202ENST00000358207 PLEKHB2Q96CS7 222 aa7.2□□□□□ -1.26
SMARCAL1-202ENST00000358207 TIMD4Q96H15 378 aa7.2□□□□□ -1.26
SMARCAL1-202ENST00000358207 FMC1Q96HJ9 113 aa7.2□□□□□ -1.26
SMARCAL1-202ENST00000358207 E7EQL1 145 aa7.2□□□□□ -1.26
SMARCAL1-202ENST00000358207 TCRAP04437 139 aa7.2□□□□□ -1.26
SMARCAL1-202ENST00000358207 CD177Q8N6Q3 437 aa7.2□□□□□ -1.26
SMARCAL1-202ENST00000358207 FAM216BQ8N7L0 139 aa7.2□□□□□ -1.26
SMARCAL1-202ENST00000358207 ZNRD1Q9P1U0 126 aa7.2□□□□□ -1.26
SMARCAL1-202ENST00000358207 C15orf61A6NNL5 157 aa7.19□□□□□ -1.26
SMARCAL1-202ENST00000358207 NCBP2LA6PVI3 153 aaKnown RBP7.19□□□□□ -1.26
SMARCAL1-202ENST00000358207 LGALS9O00182 355 aa7.19□□□□□ -1.26
SMARCAL1-202ENST00000358207 IGLV2-11P01706 119 aa7.19□□□□□ -1.26
SMARCAL1-202ENST00000358207 PMVKQ15126 192 aa7.19□□□□□ -1.26
SMARCAL1-202ENST00000358207 LYRM7Q5U5X0 104 aa7.19□□□□□ -1.26
SMARCAL1-202ENST00000358207 SIGLEC15Q6ZMC9 328 aa7.19□□□□□ -1.26
SMARCAL1-202ENST00000358207 Q86TA4 180 aa7.19□□□□□ -1.26
SMARCAL1-202ENST00000358207 CD3EP07766 207 aa7.19□□□□□ -1.26
SMARCAL1-202ENST00000358207 CREBBPQ92793 2442 aa7.19□□□□□ -1.26
SMARCAL1-202ENST00000358207 IGKV1D-17A0A075B6S4 117 aa7.19□□□□□ -1.26
SMARCAL1-202ENST00000358207 ELANEP08246 267 aa7.19□□□□□ -1.26
SMARCAL1-202ENST00000358207 C10orf113Q5VZT2 155 aa7.19□□□□□ -1.26
SMARCAL1-202ENST00000358207 DPH3Q96FX2 82 aa7.19□□□□□ -1.26
SMARCAL1-202ENST00000358207 COX7A2P2O60397 106 aa7.18□□□□□ -1.26
SMARCAL1-202ENST00000358207 CFC1BP0CG36 223 aa7.18□□□□□ -1.26
SMARCAL1-202ENST00000358207 CFC1P0CG37 223 aa7.18□□□□□ -1.26
SMARCAL1-202ENST00000358207 PRDX2P32119 198 aa7.18□□□□□ -1.26
SMARCAL1-202ENST00000358207 CKS2P33552 79 aa7.18□□□□□ -1.26
SMARCAL1-202ENST00000358207 RPL13AP40429 203 aaKnown RBP7.18□□□□□ -1.26
SMARCAL1-202ENST00000358207 CRIP1P50238 77 aa7.18□□□□□ -1.26
SMARCAL1-202ENST00000358207 PRNTQ86SH4 94 aa7.18□□□□□ -1.26
SMARCAL1-202ENST00000358207 MRPL20Q9BYC9 149 aaKnown RBP7.18□□□□□ -1.26
SMARCAL1-202ENST00000358207 INS-IGF2F8WCM5 200 aa7.18□□□□□ -1.26
SMARCAL1-202ENST00000358207 ATP5LO75964 103 aa7.18□□□□□ -1.26
SMARCAL1-202ENST00000358207 RPL39P5Q59GN2 51 aa7.18□□□□□ -1.26
SMARCAL1-202ENST00000358207 C1orf229Q6ZS94 237 aaPredicted RBP7.18□□□□□ -1.26
SMARCAL1-202ENST00000358207 FAM90A1Q86YD7 464 aa7.18□□□□□ -1.26
SMARCAL1-202ENST00000358207 OVOL1O14753 267 aa7.17□□□□□ -1.26
SMARCAL1-202ENST00000358207 ORM1P02763 201 aa7.17□□□□□ -1.26
SMARCAL1-202ENST00000358207 ERVK-16P61578 105 aa7.17□□□□□ -1.26
SMARCAL1-202ENST00000358207 GAGE2AQ6NT46 116 aa7.17□□□□□ -1.26
SMARCAL1-202ENST00000358207 LYZL1Q6UWQ5 148 aa7.17□□□□□ -1.26
SMARCAL1-202ENST00000358207 TMEM14BQ9NUH8 114 aa7.17□□□□□ -1.26
SMARCAL1-202ENST00000358207 A0A1W2PPR1 153 aa7.17□□□□□ -1.26
SMARCAL1-202ENST00000358207 LINC01546A6NGU7 62 aa7.17□□□□□ -1.26
SMARCAL1-202ENST00000358207 CRYGBP07316 175 aa7.17□□□□□ -1.26
SMARCAL1-202ENST00000358207 CRYGDP07320 174 aa7.17□□□□□ -1.26
SMARCAL1-202ENST00000358207 ZNF22P17026 224 aaPredicted RBP7.17□□□□□ -1.26
SMARCAL1-202ENST00000358207 SEC61GP60059 68 aa7.17□□□□□ -1.26
SMARCAL1-202ENST00000358207 DTX2Q86UW9 622 aa7.17□□□□□ -1.26
SMARCAL1-202ENST00000358207 ZNF714Q96N38 554 aa7.17□□□□□ -1.26
SMARCAL1-202ENST00000358207 LINC00527Q9UJ94 153 aa7.17□□□□□ -1.26
SMARCAL1-202ENST00000358207 MTORP42345 2549 aa7.17□□□□□ -1.26
SMARCAL1-202ENST00000358207 IGHV3-48P01763 117 aa7.16□□□□□ -1.26
SMARCAL1-202ENST00000358207 LINC00305Q7Z4B0 112 aa7.16□□□□□ -1.26
SMARCAL1-202ENST00000358207 C2orf48Q96LS8 159 aa7.16□□□□□ -1.26
SMARCAL1-202ENST00000358207 NAV3Q8IVL0 2385 aa7.16□□□□□ -1.26
SMARCAL1-202ENST00000358207 LYPD2Q6UXB3 125 aa7.16□□□□□ -1.26
SMARCAL1-202ENST00000358207 Q9H3A6 140 aa7.16□□□□□ -1.26
SMARCAL1-202ENST00000358207 FOXA2Q9Y261 457 aaPredicted RBP7.16□□□□□ -1.26
SMARCAL1-202ENST00000358207 hADV29S1A0JD25 119 aa7.16□□□□□ -1.26
SMARCAL1-202ENST00000358207 EIF4EBP3O60516 100 aaPredicted RBP7.16□□□□□ -1.26
SMARCAL1-202ENST00000358207 DSCR8Q96T75 97 aa7.16□□□□□ -1.26
SMARCAL1-202ENST00000358207 TINCRA0A1B0GVN0 87 aa7.15□□□□□ -1.26
SMARCAL1-202ENST00000358207 TMEM30CPA0ZSE6 113 aa7.15□□□□□ -1.26
SMARCAL1-202ENST00000358207 OOEPA6NGQ2 149 aa7.15□□□□□ -1.26
SMARCAL1-202ENST00000358207 C17orf100A8MU93 164 aa7.15□□□□□ -1.26
SMARCAL1-202ENST00000358207 CD69Q07108 199 aa7.15□□□□□ -1.26
SMARCAL1-202ENST00000358207 FAM19A4Q96LR4 140 aa7.15□□□□□ -1.26
SMARCAL1-202ENST00000358207 GNG12Q9UBI6 72 aa7.15□□□□□ -1.26
SMARCAL1-202ENST00000358207 IGLV3-9A0A075B6K5 115 aa7.15□□□□□ -1.27
SMARCAL1-202ENST00000358207 GATA1P15976 413 aaPredicted RBP7.15□□□□□ -1.27
SMARCAL1-202ENST00000358207 RPL35AP18077 110 aaKnown RBP7.15□□□□□ -1.27
SMARCAL1-202ENST00000358207 RPUSD1Q9UJJ7 312 aaKnown RBP7.15□□□□□ -1.27
SMARCAL1-202ENST00000358207 MYO9AB2RTY4 2548 aa7.15□□□□□ -1.27
SMARCAL1-202ENST00000358207 IGKV1D-37A0A075B6S9 117 aa7.14□□□□□ -1.27
SMARCAL1-202ENST00000358207 SRRM5B3KS81 715 aa7.14□□□□□ -1.27
SMARCAL1-202ENST00000358207 CRYGAP11844 174 aa7.14□□□□□ -1.27
SMARCAL1-202ENST00000358207 CCL3L1P16619 93 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms