RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 NDUFAF3Q9BU61 184 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 RPS10P5Q9NQ39 176 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 TRAV21A0A0B4J279 112 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 MUC21A0A0G2JKD1 596 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 KIR2DL5BA0A0G2JN68 375 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 KIR2DL5BA0A0G2JPC4 375 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 MUC21A0A140T8X8 626 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 PPP1R2P9O14990 202 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 P01737 135 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 SFTA3P0C7M3 94 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 NDUFA6P56556 154 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 TMEM183AQ8IXX5 376 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 KIR2DL5AQ8N109 375 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 Q8NAQ8 132 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 KIR2DL5BQ8NHK3 375 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 CELA1Q9UNI1 258 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 C7orf71A4D174 169 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 FABP5P3A8MUU1 101 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 TMEM250H0YL14 139 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 ANXA2RQ3ZCQ2 193 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 DNLZQ5SXM8 178 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 Q6AWC8 147 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 Q6ZWC4 215 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 COX8CQ7Z4L0 72 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 LINC01551Q86U37 167 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 NUDT10Q8NFP7 164 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 GRIFINA4D1Z8 144 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 TMEM189A5PLL7 270 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 FBLL1A6NHQ2 334 aaKnown RBP2.88□□□□□ -1.95
LIG4-201ENST00000356922 SH2D1AO60880 128 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 TMEM241Q24JQ0 296 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 C11orf72Q8NBR9 251 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 OR2D3Q8NGH3 330 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 SEC11CQ9BY50 192 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 SDF2L1Q9HCN8 221 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 ZFP30Q9Y2G7 519 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 CARHSP1Q9Y2V2 147 aaKnown RBP2.88□□□□□ -1.95
LIG4-201ENST00000356922 IGHV4-28A0A0C4DH34 117 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 A0A0J9YWU9 116 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 C19orf71A6NCJ1 209 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 COLCA2A8K830 154 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 B4DEV8 164 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 H7BYZ3 331 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 PFN1P07737 140 aaKnown RBP2.88□□□□□ -1.95
LIG4-201ENST00000356922 NPSP0C0P6 89 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 RPL23P62829 140 aaKnown RBP2.88□□□□□ -1.95
LIG4-201ENST00000356922 FAM162BQ5T6X4 162 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 RNASE8Q8TDE3 154 aaKnown RBP2.88□□□□□ -1.95
LIG4-201ENST00000356922 NUDT11Q96G61 164 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 KCNS1Q96KK3 526 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 TRGV1A0A0A0MS02 117 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 C20orf202A1L168 122 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 F5H697 171 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 SMIM17P0DL12 118 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 RNASE3P12724 160 aaKnown RBP2.88□□□□□ -1.95
LIG4-201ENST00000356922 RAB5AP20339 215 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 HOXA5P20719 270 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 SPANXN1Q5VSR9 72 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 ODF3Q96PU9 254 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 JPT2Q9H910 190 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 Q9UF83 564 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 PHLDA3Q9Y5J5 127 aa2.88□□□□□ -1.95
LIG4-201ENST00000356922 TRBV6-1A0A0K0K1D8 114 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 TYMSP04818 313 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 ASIPP42127 132 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 RPS10P46783 165 aaKnown RBP2.87□□□□□ -1.95
LIG4-201ENST00000356922 DAD1P61803 113 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 GTSF1Q8WW33 167 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 IGHV1OR15-1A0A075B7D0 117 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 TMEM238C9JI98 176 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 M0R381 172 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 FAM74A4Q5TZK3 123 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 TMEM256Q8N2U0 113 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 POM121L12Q8N7R1 296 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 EDA2RQ9HAV5 297 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 NOP10Q9NPE3 64 aaKnown RBP2.87□□□□□ -1.95
LIG4-201ENST00000356922 MSRB1Q9NZV6 116 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 LENEPQ9Y5L5 61 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 TRGV11A0A075B6L2 103 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 TRBV7-9A0A0J9YWB2 115 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 EREGO14944 169 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 SPINK4O60575 86 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 IGHV3-53P01767 116 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 FOXA3P55318 350 aaPredicted RBP2.87□□□□□ -1.95
LIG4-201ENST00000356922 TCL1AP56279 114 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 TDRG1Q3Y452 100 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 IBA57Q5T440 356 aaKnown RBP2.87□□□□□ -1.95
LIG4-201ENST00000356922 Q6ZTI0 123 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 U3KQK5 164 aa2.87□□□□□ -1.95
LIG4-201ENST00000356922 IGHV3-16A0A0C4DH30 117 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 GAGE12BA1L429 117 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 GAGE7O76087 117 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 NHLRC4P0CG21 123 aaPredicted RBP2.86□□□□□ -1.95
LIG4-201ENST00000356922 GAGE12FP0CL80 117 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 GAGE12GP0CL81 117 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 GAGE12IP0CL82 117 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 SPART-AS1P0CW21 52 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 FABP4P15090 132 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 PTTG1IPP53801 180 aa2.86□□□□□ -1.95
LIG4-201ENST00000356922 RBX1P62877 108 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 526.8 ms