RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 OR4C46A6NHA9 309 aa5.12□□□□□ -1.59
VPS13A-201ENST00000355766 A8MTW9 85 aa5.12□□□□□ -1.59
VPS13A-201ENST00000355766 FABP5P3A8MUU1 101 aa5.12□□□□□ -1.59
VPS13A-201ENST00000355766 HIGD1CA8MV81 97 aa5.12□□□□□ -1.59
VPS13A-201ENST00000355766 A8MZ25 164 aa5.12□□□□□ -1.59
VPS13A-201ENST00000355766 PHOX2AO14813 284 aa5.12□□□□□ -1.59
VPS13A-201ENST00000355766 DUSP14O95147 198 aaKnown RBP5.12□□□□□ -1.59
VPS13A-201ENST00000355766 TSPOP30536 169 aa5.12□□□□□ -1.59
VPS13A-201ENST00000355766 CTRLP40313 264 aa5.12□□□□□ -1.59
VPS13A-201ENST00000355766 COA6Q5JTJ3 125 aaKnown RBP5.12□□□□□ -1.59
VPS13A-201ENST00000355766 PRR27Q6MZM9 219 aa5.12□□□□□ -1.59
VPS13A-201ENST00000355766 GATD1Q8NB37 220 aa5.12□□□□□ -1.59
VPS13A-201ENST00000355766 NHLRC2Q8NBF2 726 aa5.12□□□□□ -1.59
VPS13A-201ENST00000355766 OR8A1Q8NGG7 326 aa5.12□□□□□ -1.59
VPS13A-201ENST00000355766 RPL36ALQ969Q0 106 aaKnown RBP5.12□□□□□ -1.59
VPS13A-201ENST00000355766 IGHV3-49A0A0A0MS15 119 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 KLLNB2CW77 178 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 F2Z2F3 143 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 SAP30O75446 220 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 LY6G6CO95867 125 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 IGKV2-30P06310 120 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 S100A6P06703 90 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 CSN3P07498 182 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 SNRPCP09234 159 aaKnown RBP5.11□□□□□ -1.59
VPS13A-201ENST00000355766 LEPP41159 167 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 HBBP68871 147 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 RNF182Q8N6D2 247 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 NUP35Q8NFH5 326 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 OR2D3Q8NGH3 330 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 DYNLRB2Q8TF09 96 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 BORCS7Q96B45 105 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 VGLL1Q99990 258 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 KRTAP1-5Q9BYS1 174 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 AGPAT4-IT1Q9H0P7 198 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 KMT2AQ03164 3969 aa5.11□□□□□ -1.59
VPS13A-201ENST00000355766 TRAV21A0A0B4J279 112 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 A0A0J9YX75 114 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 A0A1B0GUT8 65 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 TMEM189A5PLL7 270 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 ZNF705FA8MVS1 300 aaPredicted RBP5.1□□□□□ -1.59
VPS13A-201ENST00000355766 HIST1H2BKO60814 126 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 SH2D1AO60880 128 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 HIST1H2BJP06899 126 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 HIST1H2BOP23527 126 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 HIST1H2BBP33778 126 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 CRIP1P50238 77 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 HIST1H2BDP58876 126 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 HIST1H2BCP62807 126 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 RIGQ13278 110 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 HIST2H2BEQ16778 126 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 DEFB114Q30KQ6 69 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 TDRG1Q3Y452 100 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.1□□□□□ -1.59
VPS13A-201ENST00000355766 DNLZQ5SXM8 178 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 EBLN2Q6P2I7 272 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 LINC00322Q6ZN03 302 aaPredicted RBP5.1□□□□□ -1.59
VPS13A-201ENST00000355766 ZFAND2AQ8N6M9 145 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 Q8TAT8 98 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 GTSF1Q8WW33 167 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 DLX4Q92988 240 aaPredicted RBP5.1□□□□□ -1.59
VPS13A-201ENST00000355766 HIST1H2BHQ93079 126 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 HIST1H2BNQ99877 126 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 HIST1H2BMQ99879 126 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 C1orf43Q9BWL3 253 aa5.1□□□□□ -1.59
VPS13A-201ENST00000355766 IGHV4-4A0A075B6R2 117 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 C5orf52A6NGY3 159 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 PRAC2D3DTV9 90 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 UBE2CO00762 179 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 AMBPP02760 352 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 TRGC2P03986 189 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 OR5AL1P0C617 328 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 IGLC6P0CF74 106 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 HLA-DRB4P13762 266 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 HLA-DMBP28068 263 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 ZNF493Q6ZR52 646 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 TMEM136Q6ZRR5 245 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 TMEM61Q8N0U2 210 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 KCNS1Q96KK3 526 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 SGK494Q96LW2 274 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 PACRGQ96M98 296 aaPredicted RBP5.09□□□□□ -1.59
VPS13A-201ENST00000355766 C20orf144Q9BQM9 153 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 RETNQ9HD89 108 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 TRAPPC1Q9Y5R8 145 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 HLA-DRB4X5D2U9 266 aa5.09□□□□□ -1.59
VPS13A-201ENST00000355766 SNURFLB1AK76 121 aa5.08□□□□□ -1.6
VPS13A-201ENST00000355766 SNAI2O43623 268 aa5.08□□□□□ -1.6
VPS13A-201ENST00000355766 CA1P00915 261 aaPredicted RBP5.08□□□□□ -1.6
VPS13A-201ENST00000355766 IGLV1-51P01701 117 aa5.08□□□□□ -1.6
VPS13A-201ENST00000355766 CDKN1BP46527 198 aa5.08□□□□□ -1.6
VPS13A-201ENST00000355766 CACNG7P62955 275 aa5.08□□□□□ -1.6
VPS13A-201ENST00000355766 OR10J3Q5JRS4 329 aa5.08□□□□□ -1.6
VPS13A-201ENST00000355766 PSMG4Q5JS54 123 aa5.08□□□□□ -1.6
VPS13A-201ENST00000355766 FER1L6-AS1Q8NA97 138 aa5.08□□□□□ -1.6
VPS13A-201ENST00000355766 FRZBQ92765 325 aa5.08□□□□□ -1.6
VPS13A-201ENST00000355766 LINC00467Q9BRT7 94 aa5.08□□□□□ -1.6
VPS13A-201ENST00000355766 LOC105371267A0A1B0GV96 52 aa5.07□□□□□ -1.6
VPS13A-201ENST00000355766 GPX1P07203 203 aa5.07□□□□□ -1.6
VPS13A-201ENST00000355766 ZNF688P0C7X2 276 aa5.07□□□□□ -1.6
VPS13A-201ENST00000355766 TRGC1P0CF51 173 aa5.07□□□□□ -1.6
VPS13A-201ENST00000355766 ESDP10768 282 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms