RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 C12orf74Q32Q52 190 aa12.67□□□□□ -0.38
SHTN1-202ENST00000355371 MAJINQ3KP22 176 aa12.67□□□□□ -0.38
SHTN1-202ENST00000355371 RNASE13Q5GAN3 156 aaKnown RBP12.67□□□□□ -0.38
SHTN1-202ENST00000355371 HERV-K104P63124 156 aa12.66□□□□□ -0.38
SHTN1-202ENST00000355371 GPHB5Q86YW7 130 aa12.66□□□□□ -0.38
SHTN1-202ENST00000355371 IGKV1OR2-108A0A075B7D4 117 aa12.66□□□□□ -0.38
SHTN1-202ENST00000355371 MED14OSP0DP75 135 aa12.66□□□□□ -0.38
SHTN1-202ENST00000355371 APRG1Q8IVJ8 170 aa12.66□□□□□ -0.38
SHTN1-202ENST00000355371 ZNF106Q9H2Y7 1883 aaKnown RBP12.66□□□□□ -0.38
SHTN1-202ENST00000355371 Q8NA96 180 aa12.66□□□□□ -0.38
SHTN1-202ENST00000355371 LINC00574Q9H8X3 128 aa12.66□□□□□ -0.38
SHTN1-202ENST00000355371 TEX48A0A1B0GUV7 120 aa12.66□□□□□ -0.38
SHTN1-202ENST00000355371 IGHG2P01859 326 aa12.66□□□□□ -0.38
SHTN1-202ENST00000355371 LINC01545Q5VT33 79 aa12.66□□□□□ -0.38
SHTN1-202ENST00000355371 SCRT2Q9NQ03 307 aa12.66□□□□□ -0.38
SHTN1-202ENST00000355371 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.66□□□□□ -0.38
SHTN1-202ENST00000355371 IGKV2-29A2NJV5 120 aaPredicted RBP12.66□□□□□ -0.38
SHTN1-202ENST00000355371 ETDBQ3ZM63 59 aa12.66□□□□□ -0.38
SHTN1-202ENST00000355371 SLC25A29Q8N8R3 303 aa12.66□□□□□ -0.38
SHTN1-202ENST00000355371 A0A096LPF7 62 aa12.65□□□□□ -0.38
SHTN1-202ENST00000355371 PRSS47A8MTI9 375 aa12.65□□□□□ -0.38
SHTN1-202ENST00000355371 P0C879 139 aa12.65□□□□□ -0.38
SHTN1-202ENST00000355371 RPL39LQ96EH5 51 aaKnown RBP12.65□□□□□ -0.38
SHTN1-202ENST00000355371 GTSF1Q8WW33 167 aa12.64□□□□□ -0.39
SHTN1-202ENST00000355371 IGHV4OR15-8A0A075B7B6 117 aa12.64□□□□□ -0.39
SHTN1-202ENST00000355371 A0A087WW49 117 aa12.64□□□□□ -0.39
SHTN1-202ENST00000355371 TRAV25A0A0B4J276 109 aa12.64□□□□□ -0.39
SHTN1-202ENST00000355371 K7ERJ3 54 aa12.64□□□□□ -0.39
SHTN1-202ENST00000355371 E7EUB6 86 aa12.64□□□□□ -0.39
SHTN1-202ENST00000355371 K7EQD1 137 aa12.64□□□□□ -0.39
SHTN1-202ENST00000355371 ZFP2Q6ZN57 461 aa12.64□□□□□ -0.39
SHTN1-202ENST00000355371 UBL5Q9BZL1 73 aa12.64□□□□□ -0.39
SHTN1-202ENST00000355371 DOCK10Q96BY6 2186 aa12.64□□□□□ -0.39
SHTN1-202ENST00000355371 KMT2EQ8IZD2 1858 aa12.63□□□□□ -0.39
SHTN1-202ENST00000355371 C2orf70A6NJV1 201 aa12.63□□□□□ -0.39
SHTN1-202ENST00000355371 DAZ2Q13117 558 aaKnown RBP12.63□□□□□ -0.39
SHTN1-202ENST00000355371 DAZ4Q86SG3 579 aaKnown RBP12.63□□□□□ -0.39
SHTN1-202ENST00000355371 TMEM126AQ9H061 195 aa12.63□□□□□ -0.39
SHTN1-202ENST00000355371 EDA2RQ9HAV5 297 aa12.63□□□□□ -0.39
SHTN1-202ENST00000355371 DAZ3Q9NR90 486 aaKnown RBP12.63□□□□□ -0.39
SHTN1-202ENST00000355371 OBSL1O75147 1896 aa12.63□□□□□ -0.39
SHTN1-202ENST00000355371 NPSP0C0P6 89 aa12.63□□□□□ -0.39
SHTN1-202ENST00000355371 ZGRF1Q86YA3 2104 aa12.63□□□□□ -0.39
SHTN1-202ENST00000355371 CARD19Q96LW7 228 aa12.63□□□□□ -0.39
SHTN1-202ENST00000355371 MSRB1Q9NZV6 116 aa12.63□□□□□ -0.39
SHTN1-202ENST00000355371 CREBBPQ92793 2442 aa12.63□□□□□ -0.39
SHTN1-202ENST00000355371 ZMAT4Q9H898 229 aa12.63□□□□□ -0.39
SHTN1-202ENST00000355371 EML6Q6ZMW3 1958 aa12.63□□□□□ -0.39
SHTN1-202ENST00000355371 CFC1BP0CG36 223 aa12.62□□□□□ -0.39
SHTN1-202ENST00000355371 CFC1P0CG37 223 aa12.62□□□□□ -0.39
SHTN1-202ENST00000355371 CTRLP40313 264 aa12.62□□□□□ -0.39
SHTN1-202ENST00000355371 Q9H8V8 135 aa12.62□□□□□ -0.39
SHTN1-202ENST00000355371 PRAC2D3DTV9 90 aa12.62□□□□□ -0.39
SHTN1-202ENST00000355371 CRLF1O75462 422 aa12.62□□□□□ -0.39
SHTN1-202ENST00000355371 PCP2Q8IVA1 136 aa12.62□□□□□ -0.39
SHTN1-202ENST00000355371 MRPL36Q9P0J6 103 aaKnown RBP12.62□□□□□ -0.39
SHTN1-202ENST00000355371 NCKAP5O14513 1909 aa12.62□□□□□ -0.39
SHTN1-202ENST00000355371 WISP2O76076 250 aa12.62□□□□□ -0.39
SHTN1-202ENST00000355371 SH2D6Q7Z4S9 175 aa12.62□□□□□ -0.39
SHTN1-202ENST00000355371 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.62□□□□□ -0.392e-7■■■■■ 29.6
SHTN1-202ENST00000355371 XCL1P47992 114 aa12.62□□□□□ -0.39
SHTN1-202ENST00000355371 RPL32P62910 135 aaKnown RBP12.62□□□□□ -0.39
SHTN1-202ENST00000355371 CGB3P0DN86 165 aa12.61□□□□□ -0.39
SHTN1-202ENST00000355371 CGB7P0DN87 165 aa12.61□□□□□ -0.39
SHTN1-202ENST00000355371 A0A0J9YY99 117 aa12.61□□□□□ -0.39
SHTN1-202ENST00000355371 SPRY2O43597 315 aa12.61□□□□□ -0.39
SHTN1-202ENST00000355371 PRB1P04280 392 aa12.61□□□□□ -0.39
SHTN1-202ENST00000355371 MED13Q9UHV7 2174 aa12.61□□□□□ -0.39
SHTN1-202ENST00000355371 IFITM1P13164 125 aa12.61□□□□□ -0.39
SHTN1-202ENST00000355371 H3BMG7 143 aa12.61□□□□□ -0.39
SHTN1-202ENST00000355371 CLPSL2Q6UWE3 100 aa12.61□□□□□ -0.39
SHTN1-202ENST00000355371 SHANK1Q9Y566 2161 aa12.6□□□□□ -0.39
SHTN1-202ENST00000355371 TRAV12-1A0A0B4J245 112 aa12.6□□□□□ -0.39
SHTN1-202ENST00000355371 NUPR1O60356 82 aa12.6□□□□□ -0.39
SHTN1-202ENST00000355371 FANCD2OSQ96PS1 177 aa12.6□□□□□ -0.39
SHTN1-202ENST00000355371 RBMY1FQ15415 496 aaKnown RBP12.6□□□□□ -0.39
SHTN1-202ENST00000355371 DEFB125Q8N687 156 aa12.6□□□□□ -0.39
SHTN1-202ENST00000355371 C4orf3Q8WVX3 66 aa12.6□□□□□ -0.39
SHTN1-202ENST00000355371 TMEM131Q92545 1883 aa12.6□□□□□ -0.39
SHTN1-202ENST00000355371 A6NDX4 124 aa12.59□□□□□ -0.39
SHTN1-202ENST00000355371 Q8N1Y9 231 aa12.59□□□□□ -0.39
SHTN1-202ENST00000355371 FSTL3O95633 263 aa12.59□□□□□ -0.39
SHTN1-202ENST00000355371 ATP6V0E2Q8NHE4 81 aa12.59□□□□□ -0.39
SHTN1-202ENST00000355371 MRPL23Q16540 153 aaKnown RBP12.59□□□□□ -0.39
SHTN1-202ENST00000355371 DSCR8Q96T75 97 aa12.59□□□□□ -0.39
SHTN1-202ENST00000355371 ODF3BA8MYP8 253 aa12.59□□□□□ -0.39
SHTN1-202ENST00000355371 ATP5G1P05496 136 aa12.58□□□□□ -0.39
SHTN1-202ENST00000355371 SPART-AS1P0CW21 52 aa12.58□□□□□ -0.39
SHTN1-202ENST00000355371 MYCNOSP40205 109 aa12.58□□□□□ -0.39
SHTN1-202ENST00000355371 PIFOQ8TCI5 191 aa12.58□□□□□ -0.4
SHTN1-202ENST00000355371 Q6ZVH6 145 aa12.58□□□□□ -0.4
SHTN1-202ENST00000355371 GYPEP15421 78 aa12.57□□□□□ -0.4
SHTN1-202ENST00000355371 NRGNQ92686 78 aa12.57□□□□□ -0.4
SHTN1-202ENST00000355371 ICOSQ9Y6W8 199 aa12.57□□□□□ -0.4
SHTN1-202ENST00000355371 IGKV1D-37A0A075B6S9 117 aa12.57□□□□□ -0.4
SHTN1-202ENST00000355371 C19orf71A6NCJ1 209 aa12.57□□□□□ -0.4
SHTN1-202ENST00000355371 CDPF1Q6NVV7 123 aa12.57□□□□□ -0.4
SHTN1-202ENST00000355371 Q6ZQT7 251 aa12.57□□□□□ -0.4
SHTN1-202ENST00000355371 LINC00173Q6ZV60 143 aa12.57□□□□□ -0.4
SHTN1-202ENST00000355371 TOMM6Q96B49 74 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms