RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 DPH3P1Q9H4G8 78 aa12.66□□□□□ -0.38
VPS13B-201ENST00000355155 C19orf73Q9NVV2 129 aa12.66□□□□□ -0.38
VPS13B-201ENST00000355155 J3KRW8 73 aa12.65□□□□□ -0.38
VPS13B-201ENST00000355155 M0R2Z0 102 aa12.65□□□□□ -0.38
VPS13B-201ENST00000355155 S100A4P26447 101 aaKnown RBP12.65□□□□□ -0.38
VPS13B-201ENST00000355155 PHLDA3Q9Y5J5 127 aa12.65□□□□□ -0.38
VPS13B-201ENST00000355155 IGHV1-24A0A0C4DH33 117 aa12.65□□□□□ -0.38
VPS13B-201ENST00000355155 MUC21A0A0G2JKD1 596 aa12.65□□□□□ -0.38
VPS13B-201ENST00000355155 MUC21A0A140T8X8 626 aa12.65□□□□□ -0.38
VPS13B-201ENST00000355155 RBMY1A1P0DJD3 496 aaKnown RBP12.65□□□□□ -0.38
VPS13B-201ENST00000355155 RBMY1CP0DJD4 496 aa12.65□□□□□ -0.38
VPS13B-201ENST00000355155 RBMY1FQ15415 496 aaKnown RBP12.65□□□□□ -0.38
VPS13B-201ENST00000355155 RNASEKQ6P5S7 137 aaKnown RBP12.65□□□□□ -0.38
VPS13B-201ENST00000355155 NPYP01303 97 aa12.64□□□□□ -0.39
VPS13B-201ENST00000355155 EVI2AP22794 236 aa12.64□□□□□ -0.39
VPS13B-201ENST00000355155 LINC00315P59091 139 aa12.64□□□□□ -0.39
VPS13B-201ENST00000355155 IGLV2-18A0A075B6J9 118 aa12.64□□□□□ -0.39
VPS13B-201ENST00000355155 HECTD1Q9ULT8 2610 aa12.64□□□□□ -0.39
VPS13B-201ENST00000355155 RPL32P62910 135 aaKnown RBP12.63□□□□□ -0.39
VPS13B-201ENST00000355155 CDPF1Q6NVV7 123 aa12.63□□□□□ -0.39
VPS13B-201ENST00000355155 TEX43Q6ZNM6 134 aa12.63□□□□□ -0.39
VPS13B-201ENST00000355155 AP1S3Q96PC3 154 aa12.63□□□□□ -0.39
VPS13B-201ENST00000355155 NDUFAF3Q9BU61 184 aa12.63□□□□□ -0.39
VPS13B-201ENST00000355155 HIVEP2P31629 2446 aa12.63□□□□□ -0.39
VPS13B-201ENST00000355155 ACANP16112 2415 aa12.63□□□□□ -0.39
VPS13B-201ENST00000355155 INSL3P51460 131 aa12.63□□□□□ -0.39
VPS13B-201ENST00000355155 EDA2RQ9HAV5 297 aa12.63□□□□□ -0.39
VPS13B-201ENST00000355155 OR11H12B2RN74 326 aa12.62□□□□□ -0.39
VPS13B-201ENST00000355155 TNFRSF6BO95407 300 aa12.62□□□□□ -0.39
VPS13B-201ENST00000355155 NSUN5P1Q3KNT7 163 aa12.62□□□□□ -0.39
VPS13B-201ENST00000355155 PRR31Q5SQ13 230 aa12.62□□□□□ -0.39
VPS13B-201ENST00000355155 Q8N1Y9 231 aa12.62□□□□□ -0.39
VPS13B-201ENST00000355155 MAP1LC3AQ9H492 121 aa12.62□□□□□ -0.39
VPS13B-201ENST00000355155 NXT2Q9NPJ8 142 aaKnown RBP12.62□□□□□ -0.39
VPS13B-201ENST00000355155 AP5S1Q9NUS5 200 aa12.62□□□□□ -0.39
VPS13B-201ENST00000355155 SONP18583 2426 aaKnown RBP12.62□□□□□ -0.39
VPS13B-201ENST00000355155 TRAV12-2A0A075B6T6 113 aa12.62□□□□□ -0.39
VPS13B-201ENST00000355155 CD7P09564 240 aa12.62□□□□□ -0.39
VPS13B-201ENST00000355155 TLN2Q9Y4G6 2542 aa12.62□□□□□ -0.39
VPS13B-201ENST00000355155 SAP30O75446 220 aa12.61□□□□□ -0.39
VPS13B-201ENST00000355155 FAM19A2Q8N3H0 131 aa12.61□□□□□ -0.39
VPS13B-201ENST00000355155 PPP1R17O96001 155 aa12.61□□□□□ -0.39
VPS13B-201ENST00000355155 C3orf79P0CE67 100 aa12.61□□□□□ -0.39
VPS13B-201ENST00000355155 IFI27P40305 119 aaPredicted RBP12.61□□□□□ -0.39
VPS13B-201ENST00000355155 FA2HQ7L5A8 372 aa12.61□□□□□ -0.39
VPS13B-201ENST00000355155 Q8N8P6 123 aa12.61□□□□□ -0.39
VPS13B-201ENST00000355155 C20orf78Q9BR46 151 aa12.61□□□□□ -0.39
VPS13B-201ENST00000355155 A0A096LNJ9 63 aa12.6□□□□□ -0.39
VPS13B-201ENST00000355155 K7EMI3 77 aa12.6□□□□□ -0.39
VPS13B-201ENST00000355155 ZNF124Q15973 351 aa12.6□□□□□ -0.39
VPS13B-201ENST00000355155 SYT8Q8NBV8 401 aa12.6□□□□□ -0.39
VPS13B-201ENST00000355155 PRSS3P2Q8NHM4 247 aa12.6□□□□□ -0.39
VPS13B-201ENST00000355155 IGKV3-20P01619 116 aa12.6□□□□□ -0.39
VPS13B-201ENST00000355155 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.6□□□□□ -0.39
VPS13B-201ENST00000355155 INSP01308 110 aa12.59□□□□□ -0.39
VPS13B-201ENST00000355155 MUC4Q99102 2169 aa12.59□□□□□ -0.39
VPS13B-201ENST00000355155 SMKR1H3BMG3 65 aa12.59□□□□□ -0.39
VPS13B-201ENST00000355155 SPATA12Q7Z6I5 190 aa12.59□□□□□ -0.39
VPS13B-201ENST00000355155 IL17DQ8TAD2 202 aa12.59□□□□□ -0.39
VPS13B-201ENST00000355155 MDFICQ9P1T7 246 aa12.59□□□□□ -0.39
VPS13B-201ENST00000355155 WIPF1O43516 503 aa12.58□□□□□ -0.4
VPS13B-201ENST00000355155 GAS8-AS1O95177 125 aa12.58□□□□□ -0.4
VPS13B-201ENST00000355155 HSPB8Q9UJY1 196 aa12.58□□□□□ -0.4
VPS13B-201ENST00000355155 NCR2O95944 276 aa12.57□□□□□ -0.4
VPS13B-201ENST00000355155 BTF3P20290 206 aaKnown RBP12.57□□□□□ -0.4
VPS13B-201ENST00000355155 STHQ8IWL8 128 aa12.57□□□□□ -0.4
VPS13B-201ENST00000355155 PKIAP61925 76 aa12.57□□□□□ -0.4
VPS13B-201ENST00000355155 C11orf72Q8NBR9 251 aa12.57□□□□□ -0.4
VPS13B-201ENST00000355155 RASL10AQ92737 203 aa12.57□□□□□ -0.4
VPS13B-201ENST00000355155 KIR2DL5BA0A0G2JN68 375 aa12.56□□□□□ -0.4
VPS13B-201ENST00000355155 KIR2DL5BA0A0G2JPC4 375 aa12.56□□□□□ -0.4
VPS13B-201ENST00000355155 TRBV6-5A0A0K0K1A5 114 aa12.56□□□□□ -0.4
VPS13B-201ENST00000355155 LEPROTL1O95214 131 aa12.56□□□□□ -0.4
VPS13B-201ENST00000355155 PF4P02776 101 aa12.56□□□□□ -0.4
VPS13B-201ENST00000355155 MORN3Q6PF18 240 aaPredicted RBP12.56□□□□□ -0.4
VPS13B-201ENST00000355155 KIR2DL5AQ8N109 375 aa12.56□□□□□ -0.4
VPS13B-201ENST00000355155 SPXQ9BT56 116 aa12.56□□□□□ -0.4
VPS13B-201ENST00000355155 C9orf66Q5T8R8 295 aa12.56□□□□□ -0.4
VPS13B-201ENST00000355155 NSD1Q96L73 2696 aaPredicted RBP12.55□□□□□ -0.4
VPS13B-201ENST00000355155 SCGB1D1O95968 90 aa12.55□□□□□ -0.4
VPS13B-201ENST00000355155 CRYGDP07320 174 aa12.55□□□□□ -0.4
VPS13B-201ENST00000355155 SSTP61278 116 aa12.55□□□□□ -0.4
VPS13B-201ENST00000355155 ZNF415Q09FC8 603 aa12.55□□□□□ -0.4
VPS13B-201ENST00000355155 UFSP1Q6NVU6 142 aa12.55□□□□□ -0.4
VPS13B-201ENST00000355155 PET117Q6UWS5 81 aa12.55□□□□□ -0.4
VPS13B-201ENST00000355155 WFDC9Q8NEX5 89 aa12.55□□□□□ -0.4
VPS13B-201ENST00000355155 TMEM70Q9BUB7 260 aa12.55□□□□□ -0.4
VPS13B-201ENST00000355155 ZNF747Q9BV97 191 aa12.55□□□□□ -0.4
VPS13B-201ENST00000355155 NUTF2P61970 127 aaKnown RBP12.55□□□□□ -0.4
VPS13B-201ENST00000355155 C14orf178Q8N769 122 aaPredicted RBP12.55□□□□□ -0.4
VPS13B-201ENST00000355155 HBDP02042 147 aa12.54□□□□□ -0.4
VPS13B-201ENST00000355155 PMCHL1Q16048 86 aa12.54□□□□□ -0.4
VPS13B-201ENST00000355155 AGRNO00468 2067 aa12.54□□□□□ -0.4
VPS13B-201ENST00000355155 GIG44P09565 113 aaPredicted RBP12.54□□□□□ -0.4
VPS13B-201ENST00000355155 GATA1P15976 413 aaPredicted RBP12.54□□□□□ -0.4
VPS13B-201ENST00000355155 FCER1GP30273 86 aa12.54□□□□□ -0.4
VPS13B-201ENST00000355155 C1orf158Q8N1D5 194 aa12.54□□□□□ -0.4
VPS13B-201ENST00000355155 CBY3A6NI87 242 aa12.53□□□□□ -0.4
VPS13B-201ENST00000355155 FXYD7P58549 80 aa12.53□□□□□ -0.4
VPS13B-201ENST00000355155 KRTDAPP60985 99 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms