RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 USP9XQ93008 2570 aaPredicted RBP2.81□□□□□ -1.96
RNF38-203ENST00000353739 IGHV1OR15-1A0A075B7D0 117 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 TRBV6-5A0A0K0K1A5 114 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 IGHV4-59P01825 116 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 Q5PR19 223 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 OR4C5Q8NGB2 326 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 OR5A1Q8NGJ0 315 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 DCANP1Q8TF63 244 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 CLUHP3Q96NS8 147 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 ZNF702PQ9H963 129 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 ACACBO00763 2458 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 IGHV3OR16-13A0A075B7E8 117 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 A0A096LNJ9 63 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 A0A096LNT2 108 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 IGHV3-74A0A0B4J1X5 117 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 A0A0J9YX75 114 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 K7EQG2 157 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 TRBV12-3P01733 135 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 VAMP3Q15836 100 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 LYRM7Q5U5X0 104 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 STPG4Q8N801 248 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 VCX2Q9H322 139 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 SPANXA1Q9NS26 97 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 LINC00527Q9UJ94 153 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 USP24Q9UPU5 2620 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 MALRD1Q5VYJ5 2156 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 UTP20O75691 2785 aaKnown RBP2.81□□□□□ -1.96
RNF38-203ENST00000353739 IGHV4OR15-8A0A075B7B6 117 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 A0A087WW49 117 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 F8VRH5 84 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 SMIM13P0DJ93 91 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 NMUP48645 174 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 DYNLRB2Q8TF09 96 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 C9orf85Q96MD7 179 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 TIMM17AQ99595 171 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 C11orf21Q9P2W6 132 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 BLCAPP62952 87 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 ZNF415Q09FC8 603 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 DNAJC30Q96LL9 226 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 CD7P09564 240 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 CRYBA4P53673 196 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 RIPPLY3P57055 190 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 MPV17L2Q567V2 206 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 KLK15Q9H2R5 256 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 ZNF256Q9Y2P7 627 aaPredicted RBP2.8□□□□□ -1.96
RNF38-203ENST00000353739 SPTAN1Q13813 2472 aaKnown RBP2.8□□□□□ -1.96
RNF38-203ENST00000353739 IGHV3-16A0A0C4DH30 117 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 MUC21A0A0G2JKD1 596 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 MUC21A0A140T8X8 626 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 C9orf118A6NHY6 69 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 A8MWV9 139 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 RHODO00212 210 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 FGF6P10767 208 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 NSUN5P1Q3KNT7 163 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 MUC21Q5SSG8 566 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 PRR9Q5T870 116 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 Q71RC1 249 aaPredicted RBP2.8□□□□□ -1.96
RNF38-203ENST00000353739 ZNF843Q8N446 348 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 CSTL1Q9H114 145 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 MSRB1Q9NZV6 116 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 OR11H12B2RN74 326 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 RNF223E7ERA6 249 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 PLXNB1O43157 2135 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 GCSHP23434 173 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 HOXD3P31249 432 aaPredicted RBP2.8□□□□□ -1.96
RNF38-203ENST00000353739 OR11H1Q8NG94 326 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 OR11H2Q8NH07 326 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 RASL10AQ92737 203 aa2.8□□□□□ -1.96
RNF38-203ENST00000353739 A8MTW9 85 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 F5H697 171 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 K7EP13 123 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 HOXA3O43365 443 aaPredicted RBP2.79□□□□□ -1.96
RNF38-203ENST00000353739 INSP01308 110 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 PMVKQ15126 192 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 C2orf91Q6ZV80 131 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 WFDC3Q8IUB2 231 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 C14orf178Q8N769 122 aaPredicted RBP2.79□□□□□ -1.96
RNF38-203ENST00000353739 NEXN-AS1Q8NBZ9 246 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 C18orf15Q96N68 181 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 CHAC1Q9BUX1 264 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 FBN2P35556 2912 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 ZFYVE26Q68DK2 2539 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 I3L3M4 83 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 TAX1BP3O14907 124 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 FABP2P12104 132 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 RNASE3P12724 160 aaKnown RBP2.79□□□□□ -1.96
RNF38-203ENST00000353739 ZNF56Q15929 161 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 SUMO4Q6EEV6 95 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 C2orf66Q6UXQ4 117 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 SPAG8Q99932 426 aaPredicted RBP2.79□□□□□ -1.96
RNF38-203ENST00000353739 TMEM160Q9NX00 188 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 UBR5O95071 2799 aaPredicted RBP2.79□□□□□ -1.96
RNF38-203ENST00000353739 MED13LQ71F56 2210 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 DOPEY1Q5JWR5 2465 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 TRAV12-3A0A0B4J271 114 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 MYMXA0A1B0GTQ4 84 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 ZNF575Q86XF7 245 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 CEND1Q8N111 149 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 Q96MF0 132 aa2.79□□□□□ -1.96
RNF38-203ENST00000353739 DKK2Q9UBU2 259 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms