RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 TOMM6Q96B49 74 aa13.62□□□□□ -0.23
SPAST-202ENST00000345662 ZNF503Q96F45 646 aa13.62□□□□□ -0.23
SPAST-202ENST00000345662 SUMO4Q6EEV6 95 aa13.62□□□□□ -0.23
SPAST-202ENST00000345662 ORMDL1Q9P0S3 153 aa13.62□□□□□ -0.23
SPAST-202ENST00000345662 CTSZQ9UBR2 303 aa13.62□□□□□ -0.23
SPAST-202ENST00000345662 COL4A3Q01955 1670 aa13.62□□□□□ -0.23
SPAST-202ENST00000345662 NSUN5P1Q3KNT7 163 aa13.61□□□□□ -0.23
SPAST-202ENST00000345662 ZNF295-AS1Q8N0V1 137 aa13.61□□□□□ -0.23
SPAST-202ENST00000345662 TP53TG3Q9ULZ0 132 aa13.61□□□□□ -0.23
SPAST-202ENST00000345662 HERV-K104P63124 156 aa13.61□□□□□ -0.23
SPAST-202ENST00000345662 Q6ZUT4 128 aa13.61□□□□□ -0.23
SPAST-202ENST00000345662 A0A1B0GX51 115 aa13.61□□□□□ -0.23
SPAST-202ENST00000345662 H3BT86 120 aa13.61□□□□□ -0.23
SPAST-202ENST00000345662 RNF183Q96D59 192 aa13.61□□□□□ -0.23
SPAST-202ENST00000345662 CACNA1BQ00975 2339 aa13.6□□□□□ -0.23
SPAST-202ENST00000345662 GDF5OSQ5U4N7 250 aa13.6□□□□□ -0.23
SPAST-202ENST00000345662 PIFOQ8TCI5 191 aa13.6□□□□□ -0.23
SPAST-202ENST00000345662 CFHR3Q02985 330 aa13.59□□□□□ -0.23
SPAST-202ENST00000345662 LOXL1Q08397 574 aaPredicted RBP13.59□□□□□ -0.23
SPAST-202ENST00000345662 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.59□□□□□ -0.23
SPAST-202ENST00000345662 IGKV2-29A2NJV5 120 aaPredicted RBP13.59□□□□□ -0.23
SPAST-202ENST00000345662 PLA2G5P39877 138 aa13.59□□□□□ -0.23
SPAST-202ENST00000345662 SPRNQ5BIV9 151 aa13.59□□□□□ -0.23
SPAST-202ENST00000345662 IGLV11-55A0A075B6I3 123 aa13.58□□□□□ -0.23
SPAST-202ENST00000345662 SLC25A29Q8N8R3 303 aa13.58□□□□□ -0.23
SPAST-202ENST00000345662 RITA1Q96K30 269 aa13.58□□□□□ -0.23
SPAST-202ENST00000345662 COL6A6A6NMZ7 2263 aa13.58□□□□□ -0.24
SPAST-202ENST00000345662 TICRRQ7Z2Z1 1910 aa13.58□□□□□ -0.24
SPAST-202ENST00000345662 MED13Q9UHV7 2174 aa13.58□□□□□ -0.24
SPAST-202ENST00000345662 MRPL36Q9P0J6 103 aaKnown RBP13.58□□□□□ -0.24
SPAST-202ENST00000345662 KIAA1671Q9BY89 1806 aa13.58□□□□□ -0.24
SPAST-202ENST00000345662 PCNX1Q96RV3 2341 aa13.58□□□□□ -0.24
SPAST-202ENST00000345662 SPANXB1Q9NS25 103 aaPredicted RBP13.58□□□□□ -0.24
SPAST-202ENST00000345662 TP73-AS1Q9UF72 201 aa13.58□□□□□ -0.24
SPAST-202ENST00000345662 FAM215AQ9Y5M1 114 aa13.57□□□□□ -0.24
SPAST-202ENST00000345662 PLCE1Q9P212 2302 aa13.57□□□□□ -0.24
SPAST-202ENST00000345662 OBSL1O75147 1896 aa13.57□□□□□ -0.24
SPAST-202ENST00000345662 NOTCH4Q99466 2003 aa13.57□□□□□ -0.24
SPAST-202ENST00000345662 H0YGX0 51 aa13.57□□□□□ -0.24
SPAST-202ENST00000345662 CTSGP08311 255 aa13.57□□□□□ -0.24
SPAST-202ENST00000345662 TIMM17AQ99595 171 aa13.57□□□□□ -0.24
SPAST-202ENST00000345662 C1orf43Q9BWL3 253 aa13.57□□□□□ -0.24
SPAST-202ENST00000345662 WI2-2373I1.2A0A1W2PRP0 233 aa13.57□□□□□ -0.24
SPAST-202ENST00000345662 NDUFA11Q86Y39 141 aa13.57□□□□□ -0.24
SPAST-202ENST00000345662 C11orf86A6NJI1 115 aa13.57□□□□□ -0.24
SPAST-202ENST00000345662 BUB3O43684 328 aa13.56□□□□□ -0.24
SPAST-202ENST00000345662 IGFL3Q6UXB1 125 aa13.56□□□□□ -0.24
SPAST-202ENST00000345662 Q6ZPA2 131 aa13.56□□□□□ -0.24
SPAST-202ENST00000345662 C3orf56Q8N813 242 aa13.56□□□□□ -0.24
SPAST-202ENST00000345662 TRAV25A0A0B4J276 109 aa13.56□□□□□ -0.24
SPAST-202ENST00000345662 IGKV3D-7A0A0C4DH55 119 aa13.56□□□□□ -0.24
SPAST-202ENST00000345662 LINC01619G3V211 115 aa13.56□□□□□ -0.24
SPAST-202ENST00000345662 RPL39P62891 51 aaKnown RBP13.56□□□□□ -0.24
SPAST-202ENST00000345662 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.56□□□□□ -0.245e-6■■■■□ 22.8
SPAST-202ENST00000345662 MT-ATP8P03928 68 aa13.56□□□□□ -0.24
SPAST-202ENST00000345662 H3BUA1 57 aa13.55□□□□□ -0.24
SPAST-202ENST00000345662 PRSS33Q8NF86 280 aa13.55□□□□□ -0.24
SPAST-202ENST00000345662 NPBQ8NG41 125 aa13.55□□□□□ -0.24
SPAST-202ENST00000345662 GTF3C1Q12789 2109 aa13.55□□□□□ -0.24
SPAST-202ENST00000345662 CRYGCP07315 174 aa13.55□□□□□ -0.24
SPAST-202ENST00000345662 MSMBP08118 114 aa13.55□□□□□ -0.24
SPAST-202ENST00000345662 MBD6Q96DN6 1003 aa13.55□□□□□ -0.24
SPAST-202ENST00000345662 TCL1BO95988 128 aa13.55□□□□□ -0.24
SPAST-202ENST00000345662 IGLV2-23P01705 113 aa13.55□□□□□ -0.24
SPAST-202ENST00000345662 LINC00322Q6ZN03 302 aaPredicted RBP13.55□□□□□ -0.24
SPAST-202ENST00000345662 MED13LQ71F56 2210 aa13.55□□□□□ -0.24
SPAST-202ENST00000345662 ZNF561-AS1K7EIQ3 104 aa13.54□□□□□ -0.24
SPAST-202ENST00000345662 LGALS9O00182 355 aa13.54□□□□□ -0.24
SPAST-202ENST00000345662 TM2D2Q9BX73 214 aa13.54□□□□□ -0.24
SPAST-202ENST00000345662 PRAC2D3DTV9 90 aa13.54□□□□□ -0.24
SPAST-202ENST00000345662 E7EUB6 86 aa13.54□□□□□ -0.24
SPAST-202ENST00000345662 CDK2AP2O75956 126 aa13.54□□□□□ -0.24
SPAST-202ENST00000345662 NDUFV3P56181 108 aaKnown RBP13.54□□□□□ -0.24
SPAST-202ENST00000345662 Q71RC1 249 aaPredicted RBP13.54□□□□□ -0.24
SPAST-202ENST00000345662 IGFBPL1Q8WX77 278 aa13.54□□□□□ -0.24
SPAST-202ENST00000345662 LY6DQ14210 128 aa13.53□□□□□ -0.24
SPAST-202ENST00000345662 ABCA4P78363 2273 aa13.53□□□□□ -0.24
SPAST-202ENST00000345662 GATA3P23771 443 aa13.53□□□□□ -0.24
SPAST-202ENST00000345662 LINC01356Q8N9X3 169 aa13.53□□□□□ -0.24
SPAST-202ENST00000345662 TEX22C9J3V5 150 aa13.52□□□□□ -0.24
SPAST-202ENST00000345662 CRIP3Q6Q6R5 217 aa13.52□□□□□ -0.24
SPAST-202ENST00000345662 C9orf47Q6ZRZ4 202 aa13.52□□□□□ -0.25
SPAST-202ENST00000345662 CLEC2BQ92478 149 aa13.52□□□□□ -0.25
SPAST-202ENST00000345662 MLST8Q9BVC4 326 aa13.52□□□□□ -0.25
SPAST-202ENST00000345662 SND1-IT1Q9HBX3 110 aa13.52□□□□□ -0.25
SPAST-202ENST00000345662 FRMPD3Q5JV73 1810 aa13.52□□□□□ -0.25
SPAST-202ENST00000345662 HOXD3P31249 432 aaPredicted RBP13.51□□□□□ -0.25
SPAST-202ENST00000345662 NCOA6Q14686 2063 aaPredicted RBP13.51□□□□□ -0.25
SPAST-202ENST00000345662 ALPK3Q96L96 1907 aa13.51□□□□□ -0.25
SPAST-202ENST00000345662 IGHV7-81A0A0B4J1V7 117 aa13.51□□□□□ -0.25
SPAST-202ENST00000345662 IGKV1D-37A0A075B6S9 117 aa13.51□□□□□ -0.25
SPAST-202ENST00000345662 BRWD1-AS2P59051 145 aa13.51□□□□□ -0.25
SPAST-202ENST00000345662 ATP5G1P05496 136 aa13.51□□□□□ -0.25
SPAST-202ENST00000345662 MED14OSP0DP75 135 aa13.5□□□□□ -0.25
SPAST-202ENST00000345662 MRPL23Q16540 153 aaKnown RBP13.5□□□□□ -0.25
SPAST-202ENST00000345662 Q8N1Y9 231 aa13.49□□□□□ -0.25
SPAST-202ENST00000345662 HOXB4P17483 251 aaPredicted RBP13.49□□□□□ -0.25
SPAST-202ENST00000345662 PRR30Q53SZ7 412 aaPredicted RBP13.49□□□□□ -0.25
SPAST-202ENST00000345662 C16orf54Q6UWD8 224 aa13.49□□□□□ -0.25
SPAST-202ENST00000345662 LINC00643Q86TS7 51 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms