RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 Q9UFV3 132 aa9.44□□□□□ -0.9
COL12A1-202ENST00000345356 Q71RC1 249 aaPredicted RBP9.44□□□□□ -0.9
COL12A1-202ENST00000345356 NDUFA4O00483 81 aa9.44□□□□□ -0.9
COL12A1-202ENST00000345356 TANC1Q9C0D5 1861 aa9.44□□□□□ -0.9
COL12A1-202ENST00000345356 SPTBN2O15020 2390 aa9.43□□□□□ -0.9
COL12A1-202ENST00000345356 E7EQL1 145 aa9.43□□□□□ -0.9
COL12A1-202ENST00000345356 I3L2K1 104 aa9.43□□□□□ -0.9
COL12A1-202ENST00000345356 RPL35AP18077 110 aaKnown RBP9.43□□□□□ -0.9
COL12A1-202ENST00000345356 C2orf91Q6ZV80 131 aa9.43□□□□□ -0.9
COL12A1-202ENST00000345356 XCL2Q9UBD3 114 aa9.43□□□□□ -0.9
COL12A1-202ENST00000345356 MRPL53Q96EL3 112 aaKnown RBP9.43□□□□□ -0.9
COL12A1-202ENST00000345356 LENEPQ9Y5L5 61 aa9.43□□□□□ -0.9
COL12A1-202ENST00000345356 PLCE1Q9P212 2302 aa9.43□□□□□ -0.9
COL12A1-202ENST00000345356 NOTCH3Q9UM47 2321 aa9.43□□□□□ -0.9
COL12A1-202ENST00000345356 CREBBPQ92793 2442 aa9.42□□□□□ -0.9
COL12A1-202ENST00000345356 CFHR3Q02985 330 aa9.42□□□□□ -0.9
COL12A1-202ENST00000345356 TRIOBPQ9H2D6 2365 aa9.42□□□□□ -0.9
COL12A1-202ENST00000345356 H0YGX0 51 aa9.42□□□□□ -0.9
COL12A1-202ENST00000345356 IGLV1-44P01699 117 aa9.42□□□□□ -0.9
COL12A1-202ENST00000345356 IGLC6P0CF74 106 aa9.42□□□□□ -0.9
COL12A1-202ENST00000345356 MRPL36Q9P0J6 103 aaKnown RBP9.42□□□□□ -0.9
COL12A1-202ENST00000345356 IGKV2D-26A0A0A0MRZ7 120 aa9.41□□□□□ -0.9
COL12A1-202ENST00000345356 C3orf22Q8N5N4 141 aa9.41□□□□□ -0.9
COL12A1-202ENST00000345356 SLC25A29Q8N8R3 303 aa9.41□□□□□ -0.9
COL12A1-202ENST00000345356 MBD6Q96DN6 1003 aa9.41□□□□□ -0.9
COL12A1-202ENST00000345356 CCDC179H3BU77 68 aa9.41□□□□□ -0.9
COL12A1-202ENST00000345356 K7EIM0 57 aa9.41□□□□□ -0.9
COL12A1-202ENST00000345356 DEFB130BP0DP73 79 aa9.41□□□□□ -0.9
COL12A1-202ENST00000345356 DEFB130AP0DP74 79 aa9.41□□□□□ -0.9
COL12A1-202ENST00000345356 P0C879 139 aa9.41□□□□□ -0.9
COL12A1-202ENST00000345356 IGFBPL1Q8WX77 278 aa9.41□□□□□ -0.9
COL12A1-202ENST00000345356 Q6ZPA2 131 aa9.41□□□□□ -0.9
COL12A1-202ENST00000345356 TRBV6-1A0A0K0K1D8 114 aa9.4□□□□□ -0.9
COL12A1-202ENST00000345356 hADV29S1A0JD25 119 aa9.4□□□□□ -0.9
COL12A1-202ENST00000345356 SND1-IT1Q9HBX3 110 aa9.4□□□□□ -0.9
COL12A1-202ENST00000345356 RITA1Q96K30 269 aa9.4□□□□□ -0.9
COL12A1-202ENST00000345356 UBE2E1P51965 193 aa9.4□□□□□ -0.9
COL12A1-202ENST00000345356 XGP55808 180 aa9.4□□□□□ -0.9
COL12A1-202ENST00000345356 TIMM17AQ99595 171 aa9.4□□□□□ -0.9
COL12A1-202ENST00000345356 CACNA1HO95180 2353 aa9.4□□□□□ -0.91
COL12A1-202ENST00000345356 PRAC2D3DTV9 90 aa9.39□□□□□ -0.91
COL12A1-202ENST00000345356 CMC4P56277 68 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-202ENST00000345356 C8orf31Q8N9H6 132 aa9.39□□□□□ -0.91
COL12A1-202ENST00000345356 MAPKAPK5-AS1Q8N8E1 139 aa9.39□□□□□ -0.91
COL12A1-202ENST00000345356 COL4A6Q14031 1691 aa9.39□□□□□ -0.91
COL12A1-202ENST00000345356 INSL3P51460 131 aa9.39□□□□□ -0.91
COL12A1-202ENST00000345356 RUSC1-AS1Q66K80 236 aa9.39□□□□□ -0.91
COL12A1-202ENST00000345356 CDK2AP2O75956 126 aa9.39□□□□□ -0.91
COL12A1-202ENST00000345356 SPTAN1Q13813 2472 aaKnown RBP9.39□□□□□ -0.91
COL12A1-202ENST00000345356 OBSL1O75147 1896 aa9.38□□□□□ -0.91
COL12A1-202ENST00000345356 IGHV7-4-1A0A0J9YVY3 117 aa9.38□□□□□ -0.91
COL12A1-202ENST00000345356 E7EUB6 86 aa9.38□□□□□ -0.91
COL12A1-202ENST00000345356 PRB2P02812 416 aaPredicted RBP9.38□□□□□ -0.91
COL12A1-202ENST00000345356 TMEM61Q8N0U2 210 aa9.38□□□□□ -0.91
COL12A1-202ENST00000345356 SPRNQ5BIV9 151 aa9.38□□□□□ -0.91
COL12A1-202ENST00000345356 PKIGQ9Y2B9 76 aa9.38□□□□□ -0.91
COL12A1-202ENST00000345356 COL4A3Q01955 1670 aa9.38□□□□□ -0.91
COL12A1-202ENST00000345356 DAD1P61803 113 aa9.38□□□□□ -0.91
COL12A1-202ENST00000345356 MLST8Q9BVC4 326 aa9.37□□□□□ -0.91
COL12A1-202ENST00000345356 LECT2O14960 151 aa9.37□□□□□ -0.91
COL12A1-202ENST00000345356 LINC00310P59036 64 aa9.37□□□□□ -0.91
COL12A1-202ENST00000345356 C16orf54Q6UWD8 224 aa9.37□□□□□ -0.91
COL12A1-202ENST00000345356 NDUFA7O95182 113 aa9.36□□□□□ -0.91
COL12A1-202ENST00000345356 Q8N976 141 aa9.36□□□□□ -0.91
COL12A1-202ENST00000345356 CNOT1A5YKK6 2376 aaKnown RBP9.36□□□□□ -0.91
COL12A1-202ENST00000345356 RNF138Q8WVD3 245 aa9.36□□□□□ -0.91
COL12A1-202ENST00000345356 Q9HAA7 133 aa9.36□□□□□ -0.91
COL12A1-202ENST00000345356 C14orf132Q9NPU4 83 aa9.36□□□□□ -0.91
COL12A1-202ENST00000345356 SDIM1Q6ZPB5 146 aa9.36□□□□□ -0.91
COL12A1-202ENST00000345356 TRAV23DV6A0A075B6W5 121 aa9.36□□□□□ -0.91
COL12A1-202ENST00000345356 TRAV4A0A0B4J268 109 aa9.36□□□□□ -0.91
COL12A1-202ENST00000345356 CFAP126Q5VTH2 177 aa9.36□□□□□ -0.91
COL12A1-202ENST00000345356 COX7B2Q8TF08 81 aa9.36□□□□□ -0.91
COL12A1-202ENST00000345356 BPESC1Q9GZL8 116 aa9.36□□□□□ -0.91
COL12A1-202ENST00000345356 WI2-2373I1.2A0A1W2PRP0 233 aa9.35□□□□□ -0.91
COL12A1-202ENST00000345356 THADAQ6YHU6 1953 aa9.35□□□□□ -0.91
COL12A1-202ENST00000345356 C20orf197Q8N268 126 aa9.35□□□□□ -0.91
COL12A1-202ENST00000345356 CTSZQ9UBR2 303 aa9.35□□□□□ -0.91
COL12A1-202ENST00000345356 IGKV1D-37A0A075B6S9 117 aa9.35□□□□□ -0.91
COL12A1-202ENST00000345356 LHBP01229 141 aa9.35□□□□□ -0.91
COL12A1-202ENST00000345356 CTSGP08311 255 aa9.35□□□□□ -0.91
COL12A1-202ENST00000345356 BRWD1-AS2P59051 145 aa9.35□□□□□ -0.91
COL12A1-202ENST00000345356 CRIP3Q6Q6R5 217 aa9.35□□□□□ -0.91
COL12A1-202ENST00000345356 UFSP1Q6NVU6 142 aa9.35□□□□□ -0.91
COL12A1-202ENST00000345356 USF3Q68DE3 2245 aa9.35□□□□□ -0.91
COL12A1-202ENST00000345356 A0A0U1RQV1 116 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 ZNF561-AS1K7EIQ3 104 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 KAAG1Q9UBP8 84 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 PLXNB3Q9ULL4 1909 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 FNDC1Q4ZHG4 1894 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-202ENST00000345356 KIAA1671Q9BY89 1806 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 IGLV11-55A0A075B6I3 123 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 IGHV3-30-3P0DP02 117 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 OPRPNQ99935 248 aaPredicted RBP9.34□□□□□ -0.91
COL12A1-202ENST00000345356 DENND4CQ5VZ89 1909 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 JMJD7-PLA2G4BH0Y9G9 81 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 BUB3O43684 328 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 M0QXV9 152 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 CLPSL2Q6UWE3 100 aa9.34□□□□□ -0.91
COL12A1-202ENST00000345356 PRSS33Q8NF86 280 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms